RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 ALDH5A1P51649 535 aaPredicted RBP12.8□□□□□ -0.36
TM9SF4-203ENST00000417389 EXOSC10Q01780 885 aaKnown RBP12.8□□□□□ -0.36
TM9SF4-203ENST00000417389 RTN1Q16799 776 aa12.8□□□□□ -0.36
TM9SF4-203ENST00000417389 APOA5Q6Q788 366 aa12.8□□□□□ -0.36
TM9SF4-203ENST00000417389 RNF180Q86T96 592 aa12.8□□□□□ -0.36
TM9SF4-203ENST00000417389 BRF1Q92994 677 aa12.8□□□□□ -0.36
TM9SF4-203ENST00000417389 LENG1Q96BZ8 264 aaPredicted RBP12.8□□□□□ -0.36
TM9SF4-203ENST00000417389 RIOX1Q9H6W3 641 aa12.8□□□□□ -0.36
TM9SF4-203ENST00000417389 SPC25Q9HBM1 224 aa12.8□□□□□ -0.36
TM9SF4-203ENST00000417389 RBM28Q9NW13 759 aaKnown RBP12.8□□□□□ -0.36
TM9SF4-203ENST00000417389 CYP46A1Q9Y6A2 500 aa12.8□□□□□ -0.36
TM9SF4-203ENST00000417389 hCG_1642624A0A1W2PR95 340 aa12.79□□□□□ -0.36
TM9SF4-203ENST00000417389 EPB41L2O43491 1005 aaKnown RBP12.79□□□□□ -0.36
TM9SF4-203ENST00000417389 CYTH3O43739 400 aa12.79□□□□□ -0.36
TM9SF4-203ENST00000417389 EVI5O60447 810 aa12.79□□□□□ -0.36
TM9SF4-203ENST00000417389 PGK1P00558 417 aa12.79□□□□□ -0.36
TM9SF4-203ENST00000417389 IGHA2P01877 340 aa12.79□□□□□ -0.36
TM9SF4-203ENST00000417389 APOBRQ0VD83 1088 aa12.79□□□□□ -0.36
TM9SF4-203ENST00000417389 CCDC144BQ3MJ40 725 aa12.79□□□□□ -0.36
TM9SF4-203ENST00000417389 ARHGEF16Q5VV41 709 aa12.79□□□□□ -0.36
TM9SF4-203ENST00000417389 SGMS1Q86VZ5 419 aa12.79□□□□□ -0.36
TM9SF4-203ENST00000417389 FBXO16Q8IX29 292 aaPredicted RBP12.79□□□□□ -0.36
TM9SF4-203ENST00000417389 TBC1D5Q92609 795 aa12.79□□□□□ -0.36
TM9SF4-203ENST00000417389 KCNB2Q92953 911 aa12.79□□□□□ -0.36
TM9SF4-203ENST00000417389 FGD4Q96M96 766 aa12.79□□□□□ -0.36
TM9SF4-203ENST00000417389 SPZ1Q9BXG8 430 aa12.79□□□□□ -0.36
TM9SF4-203ENST00000417389 SENP6Q9GZR1 1112 aaPredicted RBP12.79□□□□□ -0.36
TM9SF4-203ENST00000417389 BRPF3Q9ULD4 1205 aa12.79□□□□□ -0.36
TM9SF4-203ENST00000417389 PDE4DIPQ5VU43 2346 aa12.79□□□□□ -0.36
TM9SF4-203ENST00000417389 GCOM1H8Y6P7 765 aaPredicted RBP12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 DNM1LO00429 736 aa12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 PPP1R11O60927 126 aaPredicted RBP12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 C6orf222P0C671 652 aaPredicted RBP12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 POLR2MP0CAP2 368 aa12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 HOXA13P31271 388 aaPredicted RBP12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 ADCYAP1R1P41586 468 aa12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 METAP2P50579 478 aaKnown RBP eCLIP12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 ATN1P54259 1190 aaPredicted RBP12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 TNFAIP2Q03169 654 aa12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 TMTC3Q6ZXV5 915 aa12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 HEATR3Q7Z4Q2 680 aa12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 FCHSD1Q86WN1 690 aa12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 SRBD1Q8N5C6 995 aaKnown RBP12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 RGS22Q8NE09 1264 aa12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 DNERQ8NFT8 737 aa12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 NSUN6Q8TEA1 469 aaKnown RBP12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 CUL5Q93034 780 aa12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 FERMT2Q96AC1 680 aa12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 MTMR8Q96EF0 704 aa12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 RMDN3Q96TC7 470 aa12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 UPF3BQ9BZI7 483 aaKnown RBP12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 AP5M1Q9H0R1 490 aa12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 NR2E3Q9Y5X4 410 aa12.78□□□□□ -0.36
TM9SF4-203ENST00000417389 CCDC196A0A1B0GTZ2 297 aa12.77□□□□□ -0.37
TM9SF4-203ENST00000417389 EIF2AK2P19525 551 aaKnown RBP12.77□□□□□ -0.37
TM9SF4-203ENST00000417389 LRRC41Q15345 812 aa12.77□□□□□ -0.37
TM9SF4-203ENST00000417389 SLC35G1Q2M3R5 365 aa12.77□□□□□ -0.37
TM9SF4-203ENST00000417389 RUFY3Q7L099 469 aa12.77□□□□□ -0.37
TM9SF4-203ENST00000417389 UBE2Q1Q7Z7E8 422 aa12.77□□□□□ -0.37
TM9SF4-203ENST00000417389 C7orf61Q8IZ16 206 aa12.77□□□□□ -0.37
TM9SF4-203ENST00000417389 SYTL5Q8TDW5 730 aaPredicted RBP12.77□□□□□ -0.37
TM9SF4-203ENST00000417389 VTI1AQ96AJ9 217 aa12.77□□□□□ -0.37
TM9SF4-203ENST00000417389 TAAR1Q96RJ0 339 aa12.77□□□□□ -0.37
TM9SF4-203ENST00000417389 VTA1Q9NP79 307 aa12.77□□□□□ -0.37
TM9SF4-203ENST00000417389 ASTN1O14525 1302 aa12.77□□□□□ -0.37
TM9SF4-203ENST00000417389 BAZ2BQ9UIF8 2168 aaKnown RBP12.76□□□□□ -0.37
TM9SF4-203ENST00000417389 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.76□□□□□ -0.37
TM9SF4-203ENST00000417389 DUSP11O75319 330 aaKnown RBP12.76□□□□□ -0.37
TM9SF4-203ENST00000417389 MYCLP12524 364 aaPredicted RBP12.76□□□□□ -0.37
TM9SF4-203ENST00000417389 SMARCA1P28370 1054 aa12.76□□□□□ -0.37
TM9SF4-203ENST00000417389 AKAP17AQ02040 695 aaKnown RBP12.76□□□□□ -0.37
TM9SF4-203ENST00000417389 SMARCC2Q8TAQ2 1214 aa12.76□□□□□ -0.37
TM9SF4-203ENST00000417389 PDGFCQ9NRA1 345 aa12.76□□□□□ -0.37
TM9SF4-203ENST00000417389 PDRG1Q9NUG6 133 aa12.76□□□□□ -0.37
TM9SF4-203ENST00000417389 SYNRGQ9UMZ2 1314 aa12.76□□□□□ -0.37
TM9SF4-203ENST00000417389 MYH6P13533 1939 aa12.76□□□□□ -0.37
TM9SF4-203ENST00000417389 SMCHD1A6NHR9 2005 aa12.76□□□□□ -0.37
TM9SF4-203ENST00000417389 LOC102724159A0A0B4J2E5 919 aa12.75□□□□□ -0.37
TM9SF4-203ENST00000417389 DYNC1LI2O43237 492 aaPredicted RBP12.75□□□□□ -0.37
TM9SF4-203ENST00000417389 MNX1P50219 401 aaPredicted RBP12.75□□□□□ -0.37
TM9SF4-203ENST00000417389 CCT2P78371 535 aaKnown RBP12.75□□□□□ -0.37
TM9SF4-203ENST00000417389 PWP2Q15269 919 aaKnown RBP12.75□□□□□ -0.37
TM9SF4-203ENST00000417389 STXBP2Q15833 593 aa12.75□□□□□ -0.37
TM9SF4-203ENST00000417389 GNASQ5JWF2 1037 aa12.75□□□□□ -0.37
TM9SF4-203ENST00000417389 PRPF38BQ5VTL8 546 aaKnown RBP12.75□□□□□ -0.37
TM9SF4-203ENST00000417389 IQSEC1Q6DN90 963 aa12.75□□□□□ -0.37
TM9SF4-203ENST00000417389 SEPT14Q6ZU15 432 aa12.75□□□□□ -0.37
TM9SF4-203ENST00000417389 GPKOWQ92917 476 aaPredicted RBP eCLIP12.75□□□□□ -0.37
TM9SF4-203ENST00000417389 LARP6Q9BRS8 491 aaKnown RBP12.75□□□□□ -0.37
TM9SF4-203ENST00000417389 WDR11Q9BZH6 1224 aa12.75□□□□□ -0.37
TM9SF4-203ENST00000417389 MAF1Q9H063 256 aa12.75□□□□□ -0.37
TM9SF4-203ENST00000417389 ZSWIM6Q9HCJ5 1215 aa12.75□□□□□ -0.37
TM9SF4-203ENST00000417389 COL20A1Q9P218 1284 aa12.75□□□□□ -0.37
TM9SF4-203ENST00000417389 V9GY48 417 aaPredicted RBP12.75□□□□□ -0.37
TM9SF4-203ENST00000417389 H0YGN5 161 aa12.74□□□□□ -0.37
TM9SF4-203ENST00000417389 ZEB2O60315 1214 aa12.74□□□□□ -0.37
TM9SF4-203ENST00000417389 SMPD1P17405 629 aa12.74□□□□□ -0.37
TM9SF4-203ENST00000417389 ADD1P35611 737 aaKnown RBP12.74□□□□□ -0.37
TM9SF4-203ENST00000417389 HSD17B4P51659 736 aa12.74□□□□□ -0.37
TM9SF4-203ENST00000417389 NAPAP54920 295 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms