RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 TMTC3Q6ZXV5 915 aa20.86■□□□□ 0.93
SEMA3B-201ENST00000416295 BRF1Q92994 677 aa20.86■□□□□ 0.93
SEMA3B-201ENST00000416295 ABHD16BQ9H3Z7 469 aa20.86■□□□□ 0.93
SEMA3B-201ENST00000416295 NAP1L2Q9ULW6 460 aaPredicted RBP20.86■□□□□ 0.93
SEMA3B-201ENST00000416295 GOLGA8AA7E2F4 631 aa20.85■□□□□ 0.93
SEMA3B-201ENST00000416295 GOLGA8BA8MQT2 603 aa20.85■□□□□ 0.93
SEMA3B-201ENST00000416295 PPP2R5BQ15173 497 aa20.85■□□□□ 0.93
SEMA3B-201ENST00000416295 UBE2Q1Q7Z7E8 422 aa20.85■□□□□ 0.93
SEMA3B-201ENST00000416295 SRBD1Q8N5C6 995 aaKnown RBP20.85■□□□□ 0.93
SEMA3B-201ENST00000416295 DNERQ8NFT8 737 aa20.85■□□□□ 0.93
SEMA3B-201ENST00000416295 MPHOSPH6Q99547 160 aaKnown RBP20.85■□□□□ 0.93
SEMA3B-201ENST00000416295 CEP290O15078 2479 aa20.84■□□□□ 0.93
SEMA3B-201ENST00000416295 CCDC196A0A1B0GTZ2 297 aa20.84■□□□□ 0.93
SEMA3B-201ENST00000416295 ZNF865P0CJ78 1059 aaPredicted RBP20.84■□□□□ 0.93
SEMA3B-201ENST00000416295 AKR1A1P14550 325 aa20.84■□□□□ 0.93
SEMA3B-201ENST00000416295 ALDH5A1P51649 535 aaPredicted RBP20.84■□□□□ 0.93
SEMA3B-201ENST00000416295 APOBRQ0VD83 1088 aa20.84■□□□□ 0.93
SEMA3B-201ENST00000416295 ACVR2BQ13705 512 aa20.84■□□□□ 0.93
SEMA3B-201ENST00000416295 SAMD3Q8N6K7 520 aa20.84■□□□□ 0.93
SEMA3B-201ENST00000416295 PIBF1Q8WXW3 757 aa20.84■□□□□ 0.93
SEMA3B-201ENST00000416295 MAP3K20Q9NYL2 800 aaKnown RBP20.84■□□□□ 0.93
SEMA3B-201ENST00000416295 ZHX1Q9UKY1 873 aaPredicted RBP20.84■□□□□ 0.93
SEMA3B-201ENST00000416295 ASTN1O14525 1302 aa20.83■□□□□ 0.93
SEMA3B-201ENST00000416295 B4DLN1 442 aa20.83■□□□□ 0.93
SEMA3B-201ENST00000416295 RARBP10826 455 aa20.83■□□□□ 0.93
SEMA3B-201ENST00000416295 METAP2P50579 478 aaKnown RBP eCLIP20.83■□□□□ 0.93
SEMA3B-201ENST00000416295 MRPL12P52815 198 aaKnown RBP20.83■□□□□ 0.93
SEMA3B-201ENST00000416295 CMTR1Q8N1G2 835 aaKnown RBP20.83■□□□□ 0.93
SEMA3B-201ENST00000416295 MORC4Q8TE76 937 aa20.83■□□□□ 0.93
SEMA3B-201ENST00000416295 DPF3Q92784 378 aa20.83■□□□□ 0.93
SEMA3B-201ENST00000416295 PURBQ96QR8 312 aaKnown RBP20.83■□□□□ 0.93
SEMA3B-201ENST00000416295 UPF3BQ9BZI7 483 aaKnown RBP20.83■□□□□ 0.93
SEMA3B-201ENST00000416295 FAM184BQ9ULE4 1060 aa20.83■□□□□ 0.93
SEMA3B-201ENST00000416295 SMCHD1A6NHR9 2005 aa20.83■□□□□ 0.92
SEMA3B-201ENST00000416295 CFBP00751 764 aa20.82■□□□□ 0.92
SEMA3B-201ENST00000416295 GHRHRQ02643 423 aa20.82■□□□□ 0.92
SEMA3B-201ENST00000416295 C8orf34Q49A92 452 aa20.82■□□□□ 0.92
SEMA3B-201ENST00000416295 CCDC82Q8N4S0 544 aa20.82■□□□□ 0.92
SEMA3B-201ENST00000416295 SYTL5Q8TDW5 730 aaPredicted RBP20.82■□□□□ 0.92
SEMA3B-201ENST00000416295 MYH6P13533 1939 aa20.82■□□□□ 0.92
SEMA3B-201ENST00000416295 NID2Q14112 1375 aa20.82■□□□□ 0.92
SEMA3B-201ENST00000416295 OPLAHO14841 1288 aa20.81■□□□□ 0.92
SEMA3B-201ENST00000416295 HSD17B4P51659 736 aa20.81■□□□□ 0.92
SEMA3B-201ENST00000416295 EVCP57679 992 aa20.81■□□□□ 0.92
SEMA3B-201ENST00000416295 HABP4Q5JVS0 413 aaKnown RBP20.81■□□□□ 0.92
SEMA3B-201ENST00000416295 NECAB2Q7Z6G3 386 aa20.81■□□□□ 0.92
SEMA3B-201ENST00000416295 ARRDC4Q8NCT1 418 aa20.81■□□□□ 0.92
SEMA3B-201ENST00000416295 IL17RAQ96F46 866 aa20.81■□□□□ 0.92
SEMA3B-201ENST00000416295 KATNBL1Q9H079 304 aa20.81■□□□□ 0.92
SEMA3B-201ENST00000416295 VTA1Q9NP79 307 aa20.81■□□□□ 0.92
SEMA3B-201ENST00000416295 PDRG1Q9NUG6 133 aa20.81■□□□□ 0.92
SEMA3B-201ENST00000416295 CNTNAP5Q8WYK1 1306 aa20.8■□□□□ 0.92
SEMA3B-201ENST00000416295 H0YGN5 161 aa20.8■□□□□ 0.92
SEMA3B-201ENST00000416295 SEC24BO95487 1268 aa20.8■□□□□ 0.92
SEMA3B-201ENST00000416295 PDE4DQ08499 809 aa20.8■□□□□ 0.92
SEMA3B-201ENST00000416295 CCDC144BQ3MJ40 725 aa20.8■□□□□ 0.92
SEMA3B-201ENST00000416295 ANO1Q5XXA6 986 aa20.8■□□□□ 0.92
SEMA3B-201ENST00000416295 NSUN6Q8TEA1 469 aaKnown RBP20.8■□□□□ 0.92
SEMA3B-201ENST00000416295 TBC1D5Q92609 795 aa20.8■□□□□ 0.92
SEMA3B-201ENST00000416295 PAWRQ96IZ0 340 aaKnown RBP20.8■□□□□ 0.92
SEMA3B-201ENST00000416295 NR2E3Q9Y5X4 410 aa20.8■□□□□ 0.92
SEMA3B-201ENST00000416295 LCTP09848 1927 aa20.79■□□□□ 0.92
SEMA3B-201ENST00000416295 GCOM1H8Y6P7 765 aaPredicted RBP20.79■□□□□ 0.92
SEMA3B-201ENST00000416295 DNM1LO00429 736 aa20.79■□□□□ 0.92
SEMA3B-201ENST00000416295 POLR2MP0CAP2 368 aa20.79■□□□□ 0.92
SEMA3B-201ENST00000416295 EDNRBP24530 442 aa20.79■□□□□ 0.92
SEMA3B-201ENST00000416295 CDC27P30260 824 aa20.79■□□□□ 0.92
SEMA3B-201ENST00000416295 FUT2Q10981 343 aa20.79■□□□□ 0.92
SEMA3B-201ENST00000416295 TOB2Q14106 344 aaPredicted RBP20.79■□□□□ 0.92
SEMA3B-201ENST00000416295 RMDN3Q96TC7 470 aa20.79■□□□□ 0.92
SEMA3B-201ENST00000416295 XPNPEP3Q9NQH7 507 aa20.79■□□□□ 0.92
SEMA3B-201ENST00000416295 FAM217BQ9NTX9 383 aaPredicted RBP20.79■□□□□ 0.92
SEMA3B-201ENST00000416295 COL20A1Q9P218 1284 aa20.79■□□□□ 0.92
SEMA3B-201ENST00000416295 DUSP11O75319 330 aaKnown RBP20.78■□□□□ 0.92
SEMA3B-201ENST00000416295 MNX1P50219 401 aaPredicted RBP20.78■□□□□ 0.92
SEMA3B-201ENST00000416295 DIS3LQ8TF46 1054 aaKnown RBP20.78■□□□□ 0.92
SEMA3B-201ENST00000416295 TAAR1Q96RJ0 339 aa20.78■□□□□ 0.92
SEMA3B-201ENST00000416295 IWS1Q96ST2 819 aa20.78■□□□□ 0.92
SEMA3B-201ENST00000416295 C11orf49Q9H6J7 331 aa20.78■□□□□ 0.92
SEMA3B-201ENST00000416295 FRMPD3Q5JV73 1810 aa20.78■□□□□ 0.92
SEMA3B-201ENST00000416295 BAZ2BQ9UIF8 2168 aaKnown RBP20.78■□□□□ 0.92
SEMA3B-201ENST00000416295 KBTBD13C9JR72 458 aa20.77■□□□□ 0.92
SEMA3B-201ENST00000416295 PDIA3P30101 505 aaKnown RBP20.77■□□□□ 0.92
SEMA3B-201ENST00000416295 ADD1P35611 737 aaKnown RBP20.77■□□□□ 0.92
SEMA3B-201ENST00000416295 ARHGEF16Q5VV41 709 aa20.77■□□□□ 0.92
SEMA3B-201ENST00000416295 EEPD1Q7L9B9 569 aa20.77■□□□□ 0.92
SEMA3B-201ENST00000416295 HEATR3Q7Z4Q2 680 aa20.77■□□□□ 0.92
SEMA3B-201ENST00000416295 RNF180Q86T96 592 aa20.77■□□□□ 0.92
SEMA3B-201ENST00000416295 FBXO16Q8IX29 292 aaPredicted RBP20.77■□□□□ 0.92
SEMA3B-201ENST00000416295 CUL5Q93034 780 aa20.77■□□□□ 0.92
SEMA3B-201ENST00000416295 ZNF274Q96GC6 653 aaPredicted RBP20.77■□□□□ 0.92
SEMA3B-201ENST00000416295 RBM27Q9P2N5 1060 aaKnown RBP20.77■□□□□ 0.92
SEMA3B-201ENST00000416295 DDX49Q9Y6V7 483 aaKnown RBP20.77■□□□□ 0.92
SEMA3B-201ENST00000416295 LRRC37A2A6NM11 1700 aa20.76■□□□□ 0.91
SEMA3B-201ENST00000416295 hCG_1642624A0A1W2PR95 340 aa20.76■□□□□ 0.91
SEMA3B-201ENST00000416295 hCG_1984214I3L0E3 225 aa20.76■□□□□ 0.91
SEMA3B-201ENST00000416295 HOXA13P31271 388 aaPredicted RBP20.76■□□□□ 0.91
SEMA3B-201ENST00000416295 TNFAIP2Q03169 654 aa20.76■□□□□ 0.91
SEMA3B-201ENST00000416295 ANKRD1Q15327 319 aa20.76■□□□□ 0.91
SEMA3B-201ENST00000416295 IQSEC1Q6DN90 963 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms