RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 IL25Q9H293 177 aa20.58■□□□□ 0.89
PDLIM2-208ENST00000416159 TNKSO95271 1327 aa20.57■□□□□ 0.88
PDLIM2-208ENST00000416159 CHMLP26374 656 aa20.57■□□□□ 0.88
PDLIM2-208ENST00000416159 RPS6P62753 249 aaKnown RBP20.57■□□□□ 0.88
PDLIM2-208ENST00000416159 FSCN1Q16658 493 aaKnown RBP20.57■□□□□ 0.88
PDLIM2-208ENST00000416159 FAM109BQ6ICB4 259 aaPredicted RBP20.57■□□□□ 0.88
PDLIM2-208ENST00000416159 Q7L0L9 218 aa20.57■□□□□ 0.88
PDLIM2-208ENST00000416159 DNERQ8NFT8 737 aa20.57■□□□□ 0.88
PDLIM2-208ENST00000416159 B4DLN1 442 aa20.56■□□□□ 0.88
PDLIM2-208ENST00000416159 TLR3O15455 904 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-208ENST00000416159 PARP1P09874 1014 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-208ENST00000416159 MRPL12P52815 198 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-208ENST00000416159 FPGSQ05932 587 aa20.56■□□□□ 0.88
PDLIM2-208ENST00000416159 TRDNQ13061 729 aa20.56■□□□□ 0.88
PDLIM2-208ENST00000416159 CDC37Q16543 378 aaPredicted RBP20.56■□□□□ 0.88
PDLIM2-208ENST00000416159 USH1GQ495M9 461 aa20.56■□□□□ 0.88
PDLIM2-208ENST00000416159 DUSP28Q4G0W2 176 aa20.56■□□□□ 0.88
PDLIM2-208ENST00000416159 SLC30A10Q6XR72 485 aa20.56■□□□□ 0.88
PDLIM2-208ENST00000416159 SEZ6LQ9BYH1 1024 aa20.56■□□□□ 0.88
PDLIM2-208ENST00000416159 CPVLQ9H3G5 476 aa20.56■□□□□ 0.88
PDLIM2-208ENST00000416159 MTMR10Q9NXD2 777 aa20.56■□□□□ 0.88
PDLIM2-208ENST00000416159 LRRC37A2A6NM11 1700 aa20.56■□□□□ 0.88
PDLIM2-208ENST00000416159 RBM47A0AV96 593 aaKnown RBP20.55■□□□□ 0.88
PDLIM2-208ENST00000416159 TIMP1P01033 207 aa20.55■□□□□ 0.88
PDLIM2-208ENST00000416159 PDE4DQ08499 809 aa20.55■□□□□ 0.88
PDLIM2-208ENST00000416159 IFIT1BQ5T764 474 aaKnown RBP20.55■□□□□ 0.88
PDLIM2-208ENST00000416159 CXCL17Q6UXB2 119 aa20.55■□□□□ 0.88
PDLIM2-208ENST00000416159 ADGRF4Q8IZF3 695 aa20.55■□□□□ 0.88
PDLIM2-208ENST00000416159 WDR11Q9BZH6 1224 aa20.55■□□□□ 0.88
PDLIM2-208ENST00000416159 TBX21Q9UL17 535 aa20.55■□□□□ 0.88
PDLIM2-208ENST00000416159 U3KPZ7 1027 aaPredicted RBP20.55■□□□□ 0.88
PDLIM2-208ENST00000416159 LAMA3Q16787 3333 aa20.55■□□□□ 0.88
PDLIM2-208ENST00000416159 ABCB11O95342 1321 aa20.54■□□□□ 0.88
PDLIM2-208ENST00000416159 FAM126BQ8IXS8 530 aa20.54■□□□□ 0.88
PDLIM2-208ENST00000416159 SLC43A3Q8NBI5 491 aa20.54■□□□□ 0.88
PDLIM2-208ENST00000416159 DHX16O60231 1041 aaKnown RBP20.53■□□□□ 0.88
PDLIM2-208ENST00000416159 EDNRBP24530 442 aa20.53■□□□□ 0.88
PDLIM2-208ENST00000416159 PTH1RQ03431 593 aa20.53■□□□□ 0.88
PDLIM2-208ENST00000416159 ITGA7Q13683 1181 aa20.53■□□□□ 0.88
PDLIM2-208ENST00000416159 SEC23AQ15436 765 aa20.53■□□□□ 0.88
PDLIM2-208ENST00000416159 TMEM63BQ5T3F8 832 aa20.53■□□□□ 0.88
PDLIM2-208ENST00000416159 MFSD5Q6N075 450 aa20.53■□□□□ 0.88
PDLIM2-208ENST00000416159 VAT1LQ9HCJ6 419 aa20.53■□□□□ 0.88
PDLIM2-208ENST00000416159 NKRFO15226 690 aaKnown RBP eCLIP20.52■□□□□ 0.88
PDLIM2-208ENST00000416159 CYP21A2P08686 494 aa20.52■□□□□ 0.88
PDLIM2-208ENST00000416159 PTGS1P23219 599 aa20.52■□□□□ 0.88
PDLIM2-208ENST00000416159 EPHB4P54760 987 aa20.52■□□□□ 0.88
PDLIM2-208ENST00000416159 SMAD3P84022 425 aaKnown RBP20.52■□□□□ 0.88
PDLIM2-208ENST00000416159 QRICH1Q2TAL8 776 aa20.52■□□□□ 0.88
PDLIM2-208ENST00000416159 CYB5R4Q7L1T6 521 aa20.52■□□□□ 0.88
PDLIM2-208ENST00000416159 FBXO11Q86XK2 927 aa20.52■□□□□ 0.88
PDLIM2-208ENST00000416159 MCF2L2Q86YR7 1114 aa20.52■□□□□ 0.88
PDLIM2-208ENST00000416159 RNPC3Q96LT9 517 aaKnown RBP20.52■□□□□ 0.88
PDLIM2-208ENST00000416159 JMJD4Q9H9V9 463 aa20.52■□□□□ 0.88
PDLIM2-208ENST00000416159 STXBP5LQ9Y2K9 1186 aa20.52■□□□□ 0.88
PDLIM2-208ENST00000416159 MRPL11Q9Y3B7 192 aaKnown RBP20.52■□□□□ 0.88
PDLIM2-208ENST00000416159 SGSM2O43147 1006 aa20.51■□□□□ 0.87
PDLIM2-208ENST00000416159 CD4P01730 458 aa20.51■□□□□ 0.87
PDLIM2-208ENST00000416159 PPIGQ13427 754 aaKnown RBP eCLIP20.51■□□□□ 0.871e-8■■■□□ 18.4
PDLIM2-208ENST00000416159 ZNF697Q5TEC3 545 aa20.51■□□□□ 0.87
PDLIM2-208ENST00000416159 SCFD2Q8WU76 684 aa20.51■□□□□ 0.87
PDLIM2-208ENST00000416159 POLR3EQ9NVU0 708 aa20.51■□□□□ 0.87
PDLIM2-208ENST00000416159 MYH6P13533 1939 aa20.51■□□□□ 0.87
PDLIM2-208ENST00000416159 CPT1AP50416 773 aa20.5■□□□□ 0.87
PDLIM2-208ENST00000416159 BRDTQ58F21 947 aaPredicted RBP20.5■□□□□ 0.87
PDLIM2-208ENST00000416159 TMEM199Q8N511 208 aa20.5■□□□□ 0.87
PDLIM2-208ENST00000416159 OR6J1Q8NGC5 347 aa20.5■□□□□ 0.87
PDLIM2-208ENST00000416159 SYTL5Q8TDW5 730 aaPredicted RBP20.5■□□□□ 0.87
PDLIM2-208ENST00000416159 TBC1D5Q92609 795 aa20.5■□□□□ 0.87
PDLIM2-208ENST00000416159 ERICH2A1L162 156 aa20.49■□□□□ 0.87
PDLIM2-208ENST00000416159 KLRF2D3W0D1 207 aa20.49■□□□□ 0.87
PDLIM2-208ENST00000416159 PPP2R5BQ15173 497 aa20.49■□□□□ 0.87
PDLIM2-208ENST00000416159 RALYLQ86SE5 291 aaKnown RBP20.49■□□□□ 0.87
PDLIM2-208ENST00000416159 STAG2Q8N3U4 1231 aa20.49■□□□□ 0.87
PDLIM2-208ENST00000416159 NCOA7Q8NI08 942 aa20.49■□□□□ 0.87
PDLIM2-208ENST00000416159 NSUN6Q8TEA1 469 aaKnown RBP20.49■□□□□ 0.87
PDLIM2-208ENST00000416159 AMNQ9BXJ7 453 aa20.49■□□□□ 0.87
PDLIM2-208ENST00000416159 PPP1R12CQ9BZL4 782 aa20.49■□□□□ 0.87
PDLIM2-208ENST00000416159 GRIN2DO15399 1336 aa20.49■□□□□ 0.87
PDLIM2-208ENST00000416159 E7EWF7 191 aa20.48■□□□□ 0.87
PDLIM2-208ENST00000416159 IFIT3O14879 490 aaKnown RBP20.48■□□□□ 0.87
PDLIM2-208ENST00000416159 TTLL4Q14679 1199 aa20.48■□□□□ 0.87
PDLIM2-208ENST00000416159 SLC17A8Q8NDX2 589 aa20.48■□□□□ 0.87
PDLIM2-208ENST00000416159 MAP4K1Q92918 833 aa20.48■□□□□ 0.87
PDLIM2-208ENST00000416159 TAAR1Q96RJ0 339 aa20.48■□□□□ 0.87
PDLIM2-208ENST00000416159 IWS1Q96ST2 819 aa20.48■□□□□ 0.87
PDLIM2-208ENST00000416159 GPHNQ9NQX3 736 aaPredicted RBP20.48■□□□□ 0.87
PDLIM2-208ENST00000416159 MAD2L2Q9UI95 211 aa20.48■□□□□ 0.87
PDLIM2-208ENST00000416159 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.47■□□□□ 0.87
PDLIM2-208ENST00000416159 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.47■□□□□ 0.87
PDLIM2-208ENST00000416159 PALM3A6NDB9 673 aaPredicted RBP20.47■□□□□ 0.87
PDLIM2-208ENST00000416159 KPNA6O60684 536 aa20.47■□□□□ 0.87
PDLIM2-208ENST00000416159 MYL3P08590 195 aa20.47■□□□□ 0.87
PDLIM2-208ENST00000416159 TXNP10599 105 aaKnown RBP20.47■□□□□ 0.87
PDLIM2-208ENST00000416159 PSMC6P62333 389 aa20.47■□□□□ 0.87
PDLIM2-208ENST00000416159 SART3Q15020 963 aaKnown RBP20.47■□□□□ 0.87
PDLIM2-208ENST00000416159 MTMR8Q96EF0 704 aa20.47■□□□□ 0.87
PDLIM2-208ENST00000416159 ZBTB5O15062 677 aa20.46■□□□□ 0.87
PDLIM2-208ENST00000416159 CSF2RAP15509 400 aa20.46■□□□□ 0.87
PDLIM2-208ENST00000416159 PURAQ00577 322 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms