RNA–Protein interactions for RNA: ENST00000416018.5

FLOT1-203, Transcript of flotillin 1, humanhuman

TSL 3

Gene FLOT1, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-203ENST00000416018 RNF20Q5VTR2 975 aa13.63□□□□□ -0.23
FLOT1-203ENST00000416018 CREB3L3Q68CJ9 461 aa13.63□□□□□ -0.23
FLOT1-203ENST00000416018 NOL8Q76FK4 1167 aaKnown RBP13.63□□□□□ -0.23
FLOT1-203ENST00000416018 TRERF1Q96PN7 1200 aa13.63□□□□□ -0.23
FLOT1-203ENST00000416018 PURBQ96QR8 312 aaKnown RBP13.63□□□□□ -0.23
FLOT1-203ENST00000416018 ACAD9Q9H845 621 aa13.63□□□□□ -0.23
FLOT1-203ENST00000416018 RNF146Q9NTX7 359 aa13.63□□□□□ -0.23
FLOT1-203ENST00000416018 CCPG1Q9ULG6 757 aa13.63□□□□□ -0.23
FLOT1-203ENST00000416018 TRIP12Q14669 1992 aaPredicted RBP13.63□□□□□ -0.23
FLOT1-203ENST00000416018 TCF20Q9UGU0 1960 aaKnown RBP13.62□□□□□ -0.23
FLOT1-203ENST00000416018 DCDC2CA8MYV0 355 aa13.62□□□□□ -0.23
FLOT1-203ENST00000416018 DUSP11O75319 330 aaKnown RBP13.62□□□□□ -0.23
FLOT1-203ENST00000416018 ICAM1P05362 532 aa13.62□□□□□ -0.23
FLOT1-203ENST00000416018 SMAD3P84022 425 aaKnown RBP13.62□□□□□ -0.23
FLOT1-203ENST00000416018 WTAPQ15007 396 aa13.62□□□□□ -0.23
FLOT1-203ENST00000416018 NECTIN1Q15223 517 aa13.62□□□□□ -0.23
FLOT1-203ENST00000416018 TMEM63BQ5T3F8 832 aa13.62□□□□□ -0.23
FLOT1-203ENST00000416018 CCSAPQ6IQ19 270 aaPredicted RBP13.62□□□□□ -0.23
FLOT1-203ENST00000416018 MAMDC4Q6UXC1 1216 aa13.62□□□□□ -0.23
FLOT1-203ENST00000416018 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.62□□□□□ -0.23
FLOT1-203ENST00000416018 EEPD1Q7L9B9 569 aa13.62□□□□□ -0.23
FLOT1-203ENST00000416018 CHST3Q7LGC8 479 aa13.62□□□□□ -0.23
FLOT1-203ENST00000416018 NUP133Q8WUM0 1156 aa13.62□□□□□ -0.23
FLOT1-203ENST00000416018 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.62□□□□□ -0.231e-7■□□□□ 9.5
FLOT1-203ENST00000416018 A1CFQ9NQ94 594 aaKnown RBP13.62□□□□□ -0.23
FLOT1-203ENST00000416018 PNMA2Q9UL42 364 aa13.62□□□□□ -0.23
FLOT1-203ENST00000416018 SPTBN5Q9NRC6 3674 aaKnown RBP13.61□□□□□ -0.23
FLOT1-203ENST00000416018 DHX16O60231 1041 aaKnown RBP13.61□□□□□ -0.23
FLOT1-203ENST00000416018 DNAJB2P25686 324 aa13.61□□□□□ -0.23
FLOT1-203ENST00000416018 PBX2P40425 430 aa13.61□□□□□ -0.23
FLOT1-203ENST00000416018 GRIN2CQ14957 1233 aa13.61□□□□□ -0.23
FLOT1-203ENST00000416018 MUM1L1Q5H9M0 696 aa13.61□□□□□ -0.23
FLOT1-203ENST00000416018 TMEM67Q5HYA8 995 aa13.61□□□□□ -0.23
FLOT1-203ENST00000416018 GNASQ5JWF2 1037 aa13.61□□□□□ -0.23
FLOT1-203ENST00000416018 FBXO16Q8IX29 292 aaPredicted RBP13.61□□□□□ -0.23
FLOT1-203ENST00000416018 MB21D2Q8IYB1 491 aaPredicted RBP13.61□□□□□ -0.23
FLOT1-203ENST00000416018 USP38Q8NB14 1042 aa13.61□□□□□ -0.23
FLOT1-203ENST00000416018 GLT1D1Q96MS3 346 aa13.61□□□□□ -0.23
FLOT1-203ENST00000416018 TSEN34Q9BSV6 310 aaKnown RBP13.61□□□□□ -0.23
FLOT1-203ENST00000416018 UBA5Q9GZZ9 404 aa13.61□□□□□ -0.23
FLOT1-203ENST00000416018 KATNBL1Q9H079 304 aa13.61□□□□□ -0.23
FLOT1-203ENST00000416018 TBX21Q9UL17 535 aa13.61□□□□□ -0.23
FLOT1-203ENST00000416018 REV3LO60673 3130 aa13.61□□□□□ -0.23
FLOT1-203ENST00000416018 ASTN1O14525 1302 aa13.61□□□□□ -0.23
FLOT1-203ENST00000416018 SOWAHBA6NEL2 793 aa13.6□□□□□ -0.23
FLOT1-203ENST00000416018 MOXD2PA6NHM9 499 aa13.6□□□□□ -0.23
FLOT1-203ENST00000416018 RBAK-RBAKDNI3L0D1 243 aa13.6□□□□□ -0.23
FLOT1-203ENST00000416018 CSF2RAP15509 400 aa13.6□□□□□ -0.23
FLOT1-203ENST00000416018 MCM5P33992 734 aa13.6□□□□□ -0.23
FLOT1-203ENST00000416018 ANTXR2P58335 489 aa13.6□□□□□ -0.23
FLOT1-203ENST00000416018 CXCL17Q6UXB2 119 aa13.6□□□□□ -0.23
FLOT1-203ENST00000416018 ANKRD33Q7Z3H0 272 aa13.6□□□□□ -0.23
FLOT1-203ENST00000416018 ZNF467Q7Z7K2 595 aaPredicted RBP13.6□□□□□ -0.23
FLOT1-203ENST00000416018 MSL3Q8N5Y2 521 aaKnown RBP13.6□□□□□ -0.23
FLOT1-203ENST00000416018 PPP1R13LQ8WUF5 828 aa13.6□□□□□ -0.23
FLOT1-203ENST00000416018 PPM1EQ8WY54 764 aa13.6□□□□□ -0.23
FLOT1-203ENST00000416018 CPVLQ9H3G5 476 aa13.6□□□□□ -0.23
FLOT1-203ENST00000416018 ABHD16BQ9H3Z7 469 aa13.6□□□□□ -0.23
FLOT1-203ENST00000416018 PDGFCQ9NRA1 345 aa13.6□□□□□ -0.23
FLOT1-203ENST00000416018 MYH7BA7E2Y1 1941 aa13.6□□□□□ -0.23
FLOT1-203ENST00000416018 UMODL1Q5DID0 1318 aa13.6□□□□□ -0.23
FLOT1-203ENST00000416018 CTAGE5O15320 804 aa13.59□□□□□ -0.23
FLOT1-203ENST00000416018 PRC1O43663 620 aa13.59□□□□□ -0.23
FLOT1-203ENST00000416018 TIMP1P01033 207 aa13.59□□□□□ -0.23
FLOT1-203ENST00000416018 CYP2C18P33260 490 aa13.59□□□□□ -0.23
FLOT1-203ENST00000416018 NSMFQ6X4W1 530 aa13.59□□□□□ -0.23
FLOT1-203ENST00000416018 CATIPQ7Z7H3 387 aa13.59□□□□□ -0.23
FLOT1-203ENST00000416018 TLK2Q86UE8 772 aa13.59□□□□□ -0.23
FLOT1-203ENST00000416018 ADGRF4Q8IZF3 695 aa13.59□□□□□ -0.23
FLOT1-203ENST00000416018 FAM133AQ8N9E0 248 aa13.59□□□□□ -0.23
FLOT1-203ENST00000416018 MTA3Q9BTC8 594 aa13.59□□□□□ -0.23
FLOT1-203ENST00000416018 UPF3AQ9H1J1 476 aaKnown RBP13.59□□□□□ -0.23
FLOT1-203ENST00000416018 SPC25Q9HBM1 224 aa13.59□□□□□ -0.23
FLOT1-203ENST00000416018 PRDM6Q9NQX0 595 aa13.59□□□□□ -0.23
FLOT1-203ENST00000416018 TANC1Q9C0D5 1861 aa13.59□□□□□ -0.23
FLOT1-203ENST00000416018 PTPRSQ13332 1948 aa13.58□□□□□ -0.23
FLOT1-203ENST00000416018 A0A0U1RQG5 324 aaPredicted RBP13.58□□□□□ -0.24
FLOT1-203ENST00000416018 ARVCFO00192 962 aa13.58□□□□□ -0.24
FLOT1-203ENST00000416018 CST5P28325 142 aaPredicted RBP13.58□□□□□ -0.24
FLOT1-203ENST00000416018 GJA9P57773 515 aa13.58□□□□□ -0.24
FLOT1-203ENST00000416018 PSMC6P62333 389 aa13.58□□□□□ -0.24
FLOT1-203ENST00000416018 TNFAIP2Q03169 654 aa13.58□□□□□ -0.24
FLOT1-203ENST00000416018 GRM4Q14833 912 aa13.58□□□□□ -0.24
FLOT1-203ENST00000416018 CDC37Q16543 378 aaPredicted RBP13.58□□□□□ -0.24
FLOT1-203ENST00000416018 NFXL1Q6ZNB6 911 aa13.58□□□□□ -0.24
FLOT1-203ENST00000416018 C16orf59Q7L2K0 433 aa13.58□□□□□ -0.24
FLOT1-203ENST00000416018 FAM126BQ8IXS8 530 aa13.58□□□□□ -0.24
FLOT1-203ENST00000416018 STAG2Q8N3U4 1231 aa13.58□□□□□ -0.24
FLOT1-203ENST00000416018 PCSK9Q8NBP7 692 aaKnown RBP13.58□□□□□ -0.24
FLOT1-203ENST00000416018 IGDCC4Q8TDY8 1250 aa13.58□□□□□ -0.24
FLOT1-203ENST00000416018 TMEM87BQ96K49 555 aa13.58□□□□□ -0.24
FLOT1-203ENST00000416018 TOX2Q96NM4 488 aa13.58□□□□□ -0.24
FLOT1-203ENST00000416018 SENP2Q9HC62 589 aa13.58□□□□□ -0.24
FLOT1-203ENST00000416018 VAT1LQ9HCJ6 419 aa13.58□□□□□ -0.24
FLOT1-203ENST00000416018 TET1Q8NFU7 2136 aa13.58□□□□□ -0.24
FLOT1-203ENST00000416018 KIAA1217Q5T5P2 1943 aa13.58□□□□□ -0.24
FLOT1-203ENST00000416018 WDR19Q8NEZ3 1342 aa13.58□□□□□ -0.24
FLOT1-203ENST00000416018 CHD7Q9P2D1 2997 aa13.58□□□□□ -0.24
FLOT1-203ENST00000416018 PALM3A6NDB9 673 aaPredicted RBP13.57□□□□□ -0.24
FLOT1-203ENST00000416018 CCDC69A6NI79 296 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms