RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 NSMFQ6X4W1 530 aa18.22■□□□□ 0.51
DDX56-202ENST00000415758 RANBP17Q9H2T7 1088 aaKnown RBP18.22■□□□□ 0.51
DDX56-202ENST00000415758 POLR3EQ9NVU0 708 aa18.22■□□□□ 0.51
DDX56-202ENST00000415758 ANAPC4Q9UJX5 808 aa18.22■□□□□ 0.51
DDX56-202ENST00000415758 NMT2O60551 498 aa18.21■□□□□ 0.51
DDX56-202ENST00000415758 FGRP09769 529 aa18.21■□□□□ 0.51
DDX56-202ENST00000415758 PURAQ00577 322 aaKnown RBP18.21■□□□□ 0.51
DDX56-202ENST00000415758 PPP2R2DQ66LE6 453 aa18.21■□□□□ 0.51
DDX56-202ENST00000415758 DIEXFQ68CQ4 756 aaKnown RBP18.21■□□□□ 0.51
DDX56-202ENST00000415758 DCAF4Q8WV16 495 aa18.21■□□□□ 0.51
DDX56-202ENST00000415758 CHMP4CQ96CF2 233 aa18.21■□□□□ 0.51
DDX56-202ENST00000415758 SCLYQ96I15 445 aa18.21■□□□□ 0.51
DDX56-202ENST00000415758 PURBQ96QR8 312 aaKnown RBP18.21■□□□□ 0.51
DDX56-202ENST00000415758 UHRF1Q96T88 793 aaPredicted RBP18.21■□□□□ 0.51
DDX56-202ENST00000415758 FSD1Q9BTV5 496 aa18.21■□□□□ 0.51
DDX56-202ENST00000415758 WDR11Q9BZH6 1224 aa18.21■□□□□ 0.51
DDX56-202ENST00000415758 TSPYL2Q9H2G4 693 aaPredicted RBP18.21■□□□□ 0.51
DDX56-202ENST00000415758 INCENPQ9NQS7 918 aa18.21■□□□□ 0.51
DDX56-202ENST00000415758 REV3LO60673 3130 aa18.21■□□□□ 0.51
DDX56-202ENST00000415758 TRANK1O15050 2925 aa18.2■□□□□ 0.5
DDX56-202ENST00000415758 ORC4O43929 436 aa18.2■□□□□ 0.5
DDX56-202ENST00000415758 ATP2A2P16615 1042 aaKnown RBP18.2■□□□□ 0.5
DDX56-202ENST00000415758 CPT1AP50416 773 aa18.2■□□□□ 0.5
DDX56-202ENST00000415758 ALDH5A1P51649 535 aaPredicted RBP18.2■□□□□ 0.5
DDX56-202ENST00000415758 CTDSPL2Q05D32 466 aa18.2■□□□□ 0.5
DDX56-202ENST00000415758 BAATQ14032 418 aaPredicted RBP18.2■□□□□ 0.5
DDX56-202ENST00000415758 RASGRP2Q7LDG7 609 aa18.2■□□□□ 0.5
DDX56-202ENST00000415758 TRMT13Q9NUP7 481 aaKnown RBP18.2■□□□□ 0.5
DDX56-202ENST00000415758 TNKSO95271 1327 aa18.2■□□□□ 0.5
DDX56-202ENST00000415758 SCN10AQ9Y5Y9 1956 aa18.19■□□□□ 0.5
DDX56-202ENST00000415758 BMP1P13497 986 aa18.19■□□□□ 0.5
DDX56-202ENST00000415758 MYOGP15173 224 aa18.19■□□□□ 0.5
DDX56-202ENST00000415758 TTLL4Q14679 1199 aa18.19■□□□□ 0.5
DDX56-202ENST00000415758 ZBBXA8MT70 800 aa18.18■□□□□ 0.5
DDX56-202ENST00000415758 RANBP6O60518 1105 aaKnown RBP18.18■□□□□ 0.5
DDX56-202ENST00000415758 CYP2C9P11712 490 aa18.18■□□□□ 0.5
DDX56-202ENST00000415758 RFC2P35250 354 aa18.18■□□□□ 0.5
DDX56-202ENST00000415758 ALX1Q15699 326 aa18.18■□□□□ 0.5
DDX56-202ENST00000415758 TTBK2Q6IQ55 1244 aa18.18■□□□□ 0.5
DDX56-202ENST00000415758 IL27Q8NEV9 243 aa18.18■□□□□ 0.5
DDX56-202ENST00000415758 PHOSPHO2Q8TCD6 241 aa18.18■□□□□ 0.5
DDX56-202ENST00000415758 MTG1Q9BT17 334 aaPredicted RBP18.18■□□□□ 0.5
DDX56-202ENST00000415758 PNMA2Q9UL42 364 aa18.18■□□□□ 0.5
DDX56-202ENST00000415758 SCN5AQ14524 2016 aa18.17■□□□□ 0.5
DDX56-202ENST00000415758 PITPNM1O00562 1244 aa18.17■□□□□ 0.5
DDX56-202ENST00000415758 NFIBO00712 420 aa18.17■□□□□ 0.5
DDX56-202ENST00000415758 NKRFO15226 690 aaKnown RBP eCLIP18.17■□□□□ 0.5
DDX56-202ENST00000415758 KPNA6O60684 536 aa18.17■□□□□ 0.5
DDX56-202ENST00000415758 SLC16A2P36021 539 aa18.17■□□□□ 0.5
DDX56-202ENST00000415758 AAK1Q2M2I8 961 aa18.17■□□□□ 0.5
DDX56-202ENST00000415758 TMEM67Q5HYA8 995 aa18.17■□□□□ 0.5
DDX56-202ENST00000415758 SYDE2Q5VT97 1194 aa18.17■□□□□ 0.5
DDX56-202ENST00000415758 NFRKBQ6P4R8 1299 aa18.17■□□□□ 0.5
DDX56-202ENST00000415758 OTUD7AQ8TE49 926 aaPredicted RBP18.17■□□□□ 0.5
DDX56-202ENST00000415758 CLEC4DQ8WXI8 215 aa18.17■□□□□ 0.5
DDX56-202ENST00000415758 TCP11L1Q9NUJ3 509 aa18.17■□□□□ 0.5
DDX56-202ENST00000415758 PRRC2BQ5JSZ5 2229 aaKnown RBP18.17■□□□□ 0.5
DDX56-202ENST00000415758 A6NJR5 290 aa18.16■□□□□ 0.5
DDX56-202ENST00000415758 TOP1P11387 765 aaKnown RBP18.16■□□□□ 0.5
DDX56-202ENST00000415758 ACTN1P12814 892 aa18.16■□□□□ 0.5
DDX56-202ENST00000415758 EDNRBP24530 442 aa18.16■□□□□ 0.5
DDX56-202ENST00000415758 PTPN11Q06124 597 aaPredicted RBP18.16■□□□□ 0.5
DDX56-202ENST00000415758 CCDC96Q2M329 555 aa18.16■□□□□ 0.5
DDX56-202ENST00000415758 NBPF20Q3BBV1 942 aa18.16■□□□□ 0.5
DDX56-202ENST00000415758 BRDTQ58F21 947 aaPredicted RBP18.16■□□□□ 0.5
DDX56-202ENST00000415758 VPS53Q5VIR6 699 aa18.16■□□□□ 0.5
DDX56-202ENST00000415758 OR6J1Q8NGC5 347 aa18.16■□□□□ 0.5
DDX56-202ENST00000415758 SLC9A7Q96T83 725 aa18.16■□□□□ 0.5
DDX56-202ENST00000415758 TMEM47Q9BQJ4 181 aa18.16■□□□□ 0.5
DDX56-202ENST00000415758 GPHNQ9NQX3 736 aaPredicted RBP18.16■□□□□ 0.5
DDX56-202ENST00000415758 MTCH2Q9Y6C9 303 aa18.16■□□□□ 0.5
DDX56-202ENST00000415758 TCF20Q9UGU0 1960 aaKnown RBP18.16■□□□□ 0.5
DDX56-202ENST00000415758 SALL3Q9BXA9 1300 aa18.16■□□□□ 0.5
DDX56-202ENST00000415758 CA3P07451 260 aa18.15■□□□□ 0.5
DDX56-202ENST00000415758 MYL3P08590 195 aa18.15■□□□□ 0.5
DDX56-202ENST00000415758 IQCF3P0C7M6 154 aa18.15■□□□□ 0.5
DDX56-202ENST00000415758 MX1P20591 662 aa18.15■□□□□ 0.5
DDX56-202ENST00000415758 RNF207Q6ZRF8 634 aa18.15■□□□□ 0.5
DDX56-202ENST00000415758 DEFB128Q7Z7B8 93 aa18.15■□□□□ 0.5
DDX56-202ENST00000415758 DNERQ8NFT8 737 aa18.15■□□□□ 0.5
DDX56-202ENST00000415758 MTMR7Q9Y216 660 aa18.15■□□□□ 0.5
DDX56-202ENST00000415758 RAD50Q92878 1312 aa18.15■□□□□ 0.5
DDX56-202ENST00000415758 PTPDC1A2A3K4 754 aa18.14■□□□□ 0.49
DDX56-202ENST00000415758 SLC30A10Q6XR72 485 aa18.14■□□□□ 0.49
DDX56-202ENST00000415758 SCFD2Q8WU76 684 aa18.14■□□□□ 0.49
DDX56-202ENST00000415758 TTC14Q96N46 770 aa18.14■□□□□ 0.49
DDX56-202ENST00000415758 MPHOSPH6Q99547 160 aaKnown RBP18.14■□□□□ 0.49
DDX56-202ENST00000415758 HELLSQ9NRZ9 838 aa18.14■□□□□ 0.49
DDX56-202ENST00000415758 PCDHB15Q9Y5E8 787 aa18.14■□□□□ 0.49
DDX56-202ENST00000415758 GTPBP6O43824 516 aaPredicted RBP18.13■□□□□ 0.49
DDX56-202ENST00000415758 PDHBP11177 359 aa18.13■□□□□ 0.49
DDX56-202ENST00000415758 CALML3P27482 149 aa18.13■□□□□ 0.49
DDX56-202ENST00000415758 RPS6P62753 249 aaKnown RBP18.13■□□□□ 0.49
DDX56-202ENST00000415758 TFF2Q03403 129 aa18.13■□□□□ 0.49
DDX56-202ENST00000415758 PDE4DQ08499 809 aa18.13■□□□□ 0.49
DDX56-202ENST00000415758 PPP2R5BQ15173 497 aa18.13■□□□□ 0.49
DDX56-202ENST00000415758 TICAM2Q86XR7 235 aa18.13■□□□□ 0.49
DDX56-202ENST00000415758 RETREG2Q8NC44 543 aa18.13■□□□□ 0.49
DDX56-202ENST00000415758 RGS22Q8NE09 1264 aa18.13■□□□□ 0.49
DDX56-202ENST00000415758 EVI5LQ96CN4 794 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms