RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 SH3RF1Q7Z6J0 888 aa23.87■■□□□ 1.41
PTPRU-203ENST00000415600 ENAHQ8N8S7 591 aaPredicted RBP23.87■■□□□ 1.41
PTPRU-203ENST00000415600 DNERQ8NFT8 737 aa23.87■■□□□ 1.41
PTPRU-203ENST00000415600 GNEQ9Y223 722 aaKnown RBP23.87■■□□□ 1.41
PTPRU-203ENST00000415600 ARVCFO00192 962 aa23.86■■□□□ 1.41
PTPRU-203ENST00000415600 ADCY6O43306 1168 aa23.86■■□□□ 1.41
PTPRU-203ENST00000415600 GSPT1P15170 499 aaKnown RBP23.86■■□□□ 1.41
PTPRU-203ENST00000415600 FPGSQ05932 587 aa23.86■■□□□ 1.41
PTPRU-203ENST00000415600 PDE4DQ08499 809 aa23.86■■□□□ 1.41
PTPRU-203ENST00000415600 RGS22Q8NE09 1264 aa23.86■■□□□ 1.41
PTPRU-203ENST00000415600 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.86■■□□□ 1.41
PTPRU-203ENST00000415600 DYNC1LI2O43237 492 aaPredicted RBP23.86■■□□□ 1.41
PTPRU-203ENST00000415600 GOLGA8HP0CJ92 632 aa23.86■■□□□ 1.41
PTPRU-203ENST00000415600 FAAP100Q0VG06 881 aa23.86■■□□□ 1.41
PTPRU-203ENST00000415600 BRDTQ58F21 947 aaPredicted RBP23.86■■□□□ 1.41
PTPRU-203ENST00000415600 MCF2L2Q86YR7 1114 aa23.86■■□□□ 1.41
PTPRU-203ENST00000415600 UPF2Q9HAU5 1272 aaKnown RBP23.86■■□□□ 1.41
PTPRU-203ENST00000415600 LTBP2Q14767 1821 aa23.86■■□□□ 1.41
PTPRU-203ENST00000415600 ABCB11O95342 1321 aa23.85■■□□□ 1.41
PTPRU-203ENST00000415600 ERICH2A1L162 156 aa23.85■■□□□ 1.41
PTPRU-203ENST00000415600 SMPD1P17405 629 aa23.85■■□□□ 1.41
PTPRU-203ENST00000415600 RPS6P62753 249 aaKnown RBP23.85■■□□□ 1.41
PTPRU-203ENST00000415600 CDC37Q16543 378 aaPredicted RBP23.85■■□□□ 1.41
PTPRU-203ENST00000415600 USH1GQ495M9 461 aa23.85■■□□□ 1.41
PTPRU-203ENST00000415600 FAM109BQ6ICB4 259 aaPredicted RBP23.85■■□□□ 1.41
PTPRU-203ENST00000415600 TAPT1Q6NXT6 567 aa23.85■■□□□ 1.41
PTPRU-203ENST00000415600 CLEC4DQ8WXI8 215 aa23.85■■□□□ 1.41
PTPRU-203ENST00000415600 ASTN1O14525 1302 aa23.84■■□□□ 1.41
PTPRU-203ENST00000415600 BEX3Q00994 111 aa23.84■■□□□ 1.41
PTPRU-203ENST00000415600 SART3Q15020 963 aaKnown RBP23.84■■□□□ 1.41
PTPRU-203ENST00000415600 DUSP28Q4G0W2 176 aa23.84■■□□□ 1.41
PTPRU-203ENST00000415600 RALYLQ86SE5 291 aaKnown RBP23.84■■□□□ 1.41
PTPRU-203ENST00000415600 WDR11Q9BZH6 1224 aa23.84■■□□□ 1.41
PTPRU-203ENST00000415600 UBA5Q9GZZ9 404 aa23.84■■□□□ 1.41
PTPRU-203ENST00000415600 TIMP1P01033 207 aa23.83■■□□□ 1.41
PTPRU-203ENST00000415600 CHMLP26374 656 aa23.83■■□□□ 1.41
PTPRU-203ENST00000415600 CDK7P50613 346 aa23.83■■□□□ 1.41
PTPRU-203ENST00000415600 SHHQ15465 462 aa23.83■■□□□ 1.41
PTPRU-203ENST00000415600 SLC30A10Q6XR72 485 aa23.83■■□□□ 1.41
PTPRU-203ENST00000415600 NKRFO15226 690 aaKnown RBP eCLIP23.82■■□□□ 1.4
PTPRU-203ENST00000415600 CPT1AP50416 773 aa23.82■■□□□ 1.4
PTPRU-203ENST00000415600 TRAF1Q13077 416 aa23.82■■□□□ 1.4
PTPRU-203ENST00000415600 CXCL17Q6UXB2 119 aa23.82■■□□□ 1.4
PTPRU-203ENST00000415600 ADGRF4Q8IZF3 695 aa23.82■■□□□ 1.4
PTPRU-203ENST00000415600 PDGFCQ9NRA1 345 aa23.82■■□□□ 1.4
PTPRU-203ENST00000415600 MRPL11Q9Y3B7 192 aaKnown RBP23.82■■□□□ 1.4
PTPRU-203ENST00000415600 CTAGE5O15320 804 aa23.82■■□□□ 1.4
PTPRU-203ENST00000415600 PPIGQ13427 754 aaKnown RBP eCLIP23.82■■□□□ 1.46e-7■■■□□ 16
PTPRU-203ENST00000415600 SCFD2Q8WU76 684 aa23.82■■□□□ 1.4
PTPRU-203ENST00000415600 RNPC3Q96LT9 517 aaKnown RBP23.82■■□□□ 1.4
PTPRU-203ENST00000415600 GPHNQ9NQX3 736 aaPredicted RBP23.82■■□□□ 1.4
PTPRU-203ENST00000415600 POLR3EQ9NVU0 708 aa23.82■■□□□ 1.4
PTPRU-203ENST00000415600 TBX21Q9UL17 535 aa23.82■■□□□ 1.4
PTPRU-203ENST00000415600 CDC45O75419 566 aa23.81■■□□□ 1.4
PTPRU-203ENST00000415600 PPP2R5BQ15173 497 aa23.81■■□□□ 1.4
PTPRU-203ENST00000415600 ZNF697Q5TEC3 545 aa23.81■■□□□ 1.4
PTPRU-203ENST00000415600 FBXO11Q86XK2 927 aa23.81■■□□□ 1.4
PTPRU-203ENST00000415600 TMEM199Q8N511 208 aa23.81■■□□□ 1.4
PTPRU-203ENST00000415600 PURBQ96QR8 312 aaKnown RBP23.81■■□□□ 1.4
PTPRU-203ENST00000415600 IRX5P78411 483 aaPredicted RBP23.8■■□□□ 1.4
PTPRU-203ENST00000415600 C9orf50Q5SZB4 431 aa23.8■■□□□ 1.4
PTPRU-203ENST00000415600 MFSD5Q6N075 450 aa23.8■■□□□ 1.4
PTPRU-203ENST00000415600 Q7L0L9 218 aa23.8■■□□□ 1.4
PTPRU-203ENST00000415600 FAM126BQ8IXS8 530 aa23.8■■□□□ 1.4
PTPRU-203ENST00000415600 TBC1D32Q96NH3 1257 aa23.8■■□□□ 1.4
PTPRU-203ENST00000415600 MTMR10Q9NXD2 777 aa23.8■■□□□ 1.4
PTPRU-203ENST00000415600 STXBP5LQ9Y2K9 1186 aa23.8■■□□□ 1.4
PTPRU-203ENST00000415600 RBM47A0AV96 593 aaKnown RBP23.79■■□□□ 1.4
PTPRU-203ENST00000415600 ITGB8P26012 769 aa23.79■■□□□ 1.4
PTPRU-203ENST00000415600 SMAD3P84022 425 aaKnown RBP23.79■■□□□ 1.4
PTPRU-203ENST00000415600 ITGA7Q13683 1181 aa23.79■■□□□ 1.4
PTPRU-203ENST00000415600 NCOA7Q8NI08 942 aa23.79■■□□□ 1.4
PTPRU-203ENST00000415600 NSUN6Q8TEA1 469 aaKnown RBP23.79■■□□□ 1.4
PTPRU-203ENST00000415600 AMNQ9BXJ7 453 aa23.79■■□□□ 1.4
PTPRU-203ENST00000415600 KPNA6O60684 536 aa23.78■■□□□ 1.4
PTPRU-203ENST00000415600 TTLL4Q14679 1199 aa23.78■■□□□ 1.4
PTPRU-203ENST00000415600 QRICH1Q2TAL8 776 aa23.78■■□□□ 1.4
PTPRU-203ENST00000415600 OR6J1Q8NGC5 347 aa23.78■■□□□ 1.4
PTPRU-203ENST00000415600 CPVLQ9H3G5 476 aa23.78■■□□□ 1.4
PTPRU-203ENST00000415600 VAT1LQ9HCJ6 419 aa23.78■■□□□ 1.4
PTPRU-203ENST00000415600 DDX49Q9Y6V7 483 aaKnown RBP23.78■■□□□ 1.4
PTPRU-203ENST00000415600 LRRC37A2A6NM11 1700 aa23.78■■□□□ 1.4
PTPRU-203ENST00000415600 IFIT3O14879 490 aaKnown RBP23.78■■□□□ 1.4
PTPRU-203ENST00000415600 SGSM2O43147 1006 aa23.78■■□□□ 1.4
PTPRU-203ENST00000415600 EIF5BO60841 1220 aaKnown RBP23.78■■□□□ 1.4
PTPRU-203ENST00000415600 EDNRBP24530 442 aa23.78■■□□□ 1.4
PTPRU-203ENST00000415600 SLC43A3Q8NBI5 491 aa23.78■■□□□ 1.4
PTPRU-203ENST00000415600 IWS1Q96ST2 819 aa23.78■■□□□ 1.4
PTPRU-203ENST00000415600 IL25Q9H293 177 aa23.78■■□□□ 1.4
PTPRU-203ENST00000415600 KLRF2D3W0D1 207 aa23.77■■□□□ 1.4
PTPRU-203ENST00000415600 JMJD4Q9H9V9 463 aa23.77■■□□□ 1.4
PTPRU-203ENST00000415600 CYP21A2P08686 494 aa23.76■■□□□ 1.39
PTPRU-203ENST00000415600 SUPT20HL2P0C7V6 817 aa23.76■■□□□ 1.39
PTPRU-203ENST00000415600 SEC23AQ15436 765 aa23.76■■□□□ 1.39
PTPRU-203ENST00000415600 PSRC1Q6PGN9 363 aaPredicted RBP23.76■■□□□ 1.39
PTPRU-203ENST00000415600 MAP3K20Q9NYL2 800 aaKnown RBP23.76■■□□□ 1.39
PTPRU-203ENST00000415600 CD4P01730 458 aa23.75■■□□□ 1.39
PTPRU-203ENST00000415600 TXNP10599 105 aaKnown RBP23.75■■□□□ 1.39
PTPRU-203ENST00000415600 PTH1RQ03431 593 aa23.75■■□□□ 1.39
PTPRU-203ENST00000415600 WTAPQ15007 396 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms