RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 WDR19Q8NEZ3 1342 aa18.21■□□□□ 0.51
ACTB-202ENST00000414620 CDK7P50613 346 aa18.2■□□□□ 0.5
ACTB-202ENST00000414620 RPS6P62753 249 aaKnown RBP18.2■□□□□ 0.5
ACTB-202ENST00000414620 NKX3-2P78367 333 aa18.2■□□□□ 0.5
ACTB-202ENST00000414620 CCDC178Q5BJE1 867 aa18.2■□□□□ 0.5
ACTB-202ENST00000414620 ZNF697Q5TEC3 545 aa18.2■□□□□ 0.5
ACTB-202ENST00000414620 IQSEC1Q6DN90 963 aa18.2■□□□□ 0.5
ACTB-202ENST00000414620 FAM126BQ8IXS8 530 aa18.2■□□□□ 0.5
ACTB-202ENST00000414620 PPP1R12CQ9BZL4 782 aa18.2■□□□□ 0.5
ACTB-202ENST00000414620 TLR3O15455 904 aaKnown RBP18.19■□□□□ 0.5
ACTB-202ENST00000414620 DHX16O60231 1041 aaKnown RBP18.19■□□□□ 0.5
ACTB-202ENST00000414620 TIMP1P01033 207 aa18.19■□□□□ 0.5
ACTB-202ENST00000414620 PSMC6P62333 389 aa18.19■□□□□ 0.5
ACTB-202ENST00000414620 UBAC1Q9BSL1 405 aa18.19■□□□□ 0.5
ACTB-202ENST00000414620 KRT23Q9C075 422 aa18.19■□□□□ 0.5
ACTB-202ENST00000414620 MYH7BA7E2Y1 1941 aa18.19■□□□□ 0.5
ACTB-202ENST00000414620 PDE4DQ08499 809 aa18.18■□□□□ 0.5
ACTB-202ENST00000414620 ASPRV1Q53RT3 343 aa18.18■□□□□ 0.5
ACTB-202ENST00000414620 CYB5R4Q7L1T6 521 aa18.18■□□□□ 0.5
ACTB-202ENST00000414620 ADGRF4Q8IZF3 695 aa18.18■□□□□ 0.5
ACTB-202ENST00000414620 SLC17A8Q8NDX2 589 aa18.18■□□□□ 0.5
ACTB-202ENST00000414620 ANKS1AQ92625 1134 aa18.18■□□□□ 0.5
ACTB-202ENST00000414620 GUCD1Q96NT3 240 aa18.18■□□□□ 0.5
ACTB-202ENST00000414620 WDR11Q9BZH6 1224 aa18.18■□□□□ 0.5
ACTB-202ENST00000414620 CNNM2Q9H8M5 875 aa18.18■□□□□ 0.5
ACTB-202ENST00000414620 VAT1LQ9HCJ6 419 aa18.18■□□□□ 0.5
ACTB-202ENST00000414620 PNMA2Q9UL42 364 aa18.18■□□□□ 0.5
ACTB-202ENST00000414620 STXBP5LQ9Y2K9 1186 aa18.18■□□□□ 0.5
ACTB-202ENST00000414620 RAD50Q92878 1312 aa18.18■□□□□ 0.5
ACTB-202ENST00000414620 BAZ2BQ9UIF8 2168 aaKnown RBP18.17■□□□□ 0.5
ACTB-202ENST00000414620 SCN5AQ14524 2016 aa18.17■□□□□ 0.5
ACTB-202ENST00000414620 ZEB2O60315 1214 aa18.17■□□□□ 0.5
ACTB-202ENST00000414620 PARP1P09874 1014 aaKnown RBP18.17■□□□□ 0.5
ACTB-202ENST00000414620 NT5C2P49902 561 aa18.17■□□□□ 0.5
ACTB-202ENST00000414620 ITGA7Q13683 1181 aa18.17■□□□□ 0.5
ACTB-202ENST00000414620 DUSP28Q4G0W2 176 aa18.17■□□□□ 0.5
ACTB-202ENST00000414620 IFIT1BQ5T764 474 aaKnown RBP18.17■□□□□ 0.5
ACTB-202ENST00000414620 OR6J1Q8NGC5 347 aa18.17■□□□□ 0.5
ACTB-202ENST00000414620 PTH1RQ03431 593 aa18.16■□□□□ 0.5
ACTB-202ENST00000414620 QRICH1Q2TAL8 776 aa18.16■□□□□ 0.5
ACTB-202ENST00000414620 FAM109BQ6ICB4 259 aaPredicted RBP18.16■□□□□ 0.5
ACTB-202ENST00000414620 MFSD5Q6N075 450 aa18.16■□□□□ 0.5
ACTB-202ENST00000414620 STAG2Q8N3U4 1231 aa18.16■□□□□ 0.5
ACTB-202ENST00000414620 TBC1D5Q92609 795 aa18.16■□□□□ 0.5
ACTB-202ENST00000414620 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.16■□□□□ 0.51e-27■■□□□ 12.9
ACTB-202ENST00000414620 Q9Y3F1 56 aa18.16■□□□□ 0.5
ACTB-202ENST00000414620 SCN10AQ9Y5Y9 1956 aa18.16■□□□□ 0.5
ACTB-202ENST00000414620 GRIN2DO15399 1336 aa18.16■□□□□ 0.5
ACTB-202ENST00000414620 ABCB11O95342 1321 aa18.16■□□□□ 0.5
ACTB-202ENST00000414620 LOC102724159A0A0B4J2E5 919 aa18.15■□□□□ 0.5
ACTB-202ENST00000414620 CABYRO75952 493 aa18.15■□□□□ 0.5
ACTB-202ENST00000414620 CD4P01730 458 aa18.15■□□□□ 0.5
ACTB-202ENST00000414620 MYL3P08590 195 aa18.15■□□□□ 0.5
ACTB-202ENST00000414620 ACRP10323 421 aa18.15■□□□□ 0.5
ACTB-202ENST00000414620 CSF2RAP15509 400 aa18.15■□□□□ 0.5
ACTB-202ENST00000414620 CHMLP26374 656 aa18.15■□□□□ 0.5
ACTB-202ENST00000414620 CYP2C18P33260 490 aa18.15■□□□□ 0.5
ACTB-202ENST00000414620 SMAD3P84022 425 aaKnown RBP18.15■□□□□ 0.5
ACTB-202ENST00000414620 PWP2Q15269 919 aaKnown RBP18.15■□□□□ 0.5
ACTB-202ENST00000414620 RUFY2Q8WXA3 655 aa18.15■□□□□ 0.5
ACTB-202ENST00000414620 COPS5Q92905 334 aa18.15■□□□□ 0.5
ACTB-202ENST00000414620 MPHOSPH6Q99547 160 aaKnown RBP18.15■□□□□ 0.5
ACTB-202ENST00000414620 UMODL1Q5DID0 1318 aa18.15■□□□□ 0.5
ACTB-202ENST00000414620 RBM47A0AV96 593 aaKnown RBP18.14■□□□□ 0.49
ACTB-202ENST00000414620 CYP21A2P08686 494 aa18.14■□□□□ 0.49
ACTB-202ENST00000414620 EDNRBP24530 442 aa18.14■□□□□ 0.49
ACTB-202ENST00000414620 PPIGQ13427 754 aaKnown RBP eCLIP18.14■□□□□ 0.49
ACTB-202ENST00000414620 PPP2R5BQ15173 497 aa18.14■□□□□ 0.49
ACTB-202ENST00000414620 SEC23AQ15436 765 aa18.14■□□□□ 0.49
ACTB-202ENST00000414620 SLC43A3Q8NBI5 491 aa18.14■□□□□ 0.49
ACTB-202ENST00000414620 DNERQ8NFT8 737 aa18.14■□□□□ 0.49
ACTB-202ENST00000414620 PPP1R13LQ8WUF5 828 aa18.14■□□□□ 0.49
ACTB-202ENST00000414620 TAAR1Q96RJ0 339 aa18.14■□□□□ 0.49
ACTB-202ENST00000414620 TRPV6Q9H1D0 765 aa18.14■□□□□ 0.49
ACTB-202ENST00000414620 JMJD4Q9H9V9 463 aa18.14■□□□□ 0.49
ACTB-202ENST00000414620 COL20A1Q9P218 1284 aa18.14■□□□□ 0.49
ACTB-202ENST00000414620 TAF6LQ9Y6J9 622 aa18.14■□□□□ 0.49
ACTB-202ENST00000414620 TANC1Q9C0D5 1861 aa18.14■□□□□ 0.49
ACTB-202ENST00000414620 B4GALT4O60513 344 aa18.13■□□□□ 0.49
ACTB-202ENST00000414620 TRDNQ13061 729 aa18.13■□□□□ 0.49
ACTB-202ENST00000414620 FBXO11Q86XK2 927 aa18.13■□□□□ 0.49
ACTB-202ENST00000414620 TMEM199Q8N511 208 aa18.13■□□□□ 0.49
ACTB-202ENST00000414620 TTYH1Q9H313 450 aaPredicted RBP18.13■□□□□ 0.49
ACTB-202ENST00000414620 HIPK3Q9H422 1215 aa18.13■□□□□ 0.49
ACTB-202ENST00000414620 TRIP12Q14669 1992 aaPredicted RBP18.13■□□□□ 0.49
ACTB-202ENST00000414620 COL6A3P12111 3177 aa18.12■□□□□ 0.49
ACTB-202ENST00000414620 ARIH2O95376 493 aa18.12■□□□□ 0.49
ACTB-202ENST00000414620 CPT1AP50416 773 aa18.12■□□□□ 0.49
ACTB-202ENST00000414620 CCL23P55773 120 aa18.12■□□□□ 0.49
ACTB-202ENST00000414620 PURAQ00577 322 aaKnown RBP18.12■□□□□ 0.49
ACTB-202ENST00000414620 C16orf59Q7L2K0 433 aa18.12■□□□□ 0.49
ACTB-202ENST00000414620 CHST3Q7LGC8 479 aa18.12■□□□□ 0.49
ACTB-202ENST00000414620 SYTL5Q8TDW5 730 aaPredicted RBP18.12■□□□□ 0.49
ACTB-202ENST00000414620 SCFD2Q8WU76 684 aa18.12■□□□□ 0.49
ACTB-202ENST00000414620 SEMA6BQ9H3T3 888 aa18.12■□□□□ 0.49
ACTB-202ENST00000414620 SENP2Q9HC62 589 aa18.12■□□□□ 0.49
ACTB-202ENST00000414620 POLR3EQ9NVU0 708 aa18.12■□□□□ 0.49
ACTB-202ENST00000414620 B4DLN1 442 aa18.11■□□□□ 0.49
ACTB-202ENST00000414620 TXNP10599 105 aaKnown RBP18.11■□□□□ 0.49
ACTB-202ENST00000414620 MRPL12P52815 198 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms