RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 CCL14Q16627 93 aa12.02□□□□□ -0.49
HLA-DMB-257ENST00000414017 FCHSD1Q86WN1 690 aa12.02□□□□□ -0.49
HLA-DMB-257ENST00000414017 NSUN7Q8NE18 718 aaKnown RBP12.02□□□□□ -0.49
HLA-DMB-257ENST00000414017 SMARCC2Q8TAQ2 1214 aa12.02□□□□□ -0.49
HLA-DMB-257ENST00000414017 NPLOC4Q8TAT6 608 aa12.02□□□□□ -0.49
HLA-DMB-257ENST00000414017 CUL5Q93034 780 aa12.02□□□□□ -0.49
HLA-DMB-257ENST00000414017 AIFM3Q96NN9 605 aa12.02□□□□□ -0.49
HLA-DMB-257ENST00000414017 APBA2Q99767 749 aa12.02□□□□□ -0.49
HLA-DMB-257ENST00000414017 CYP39A1Q9NYL5 469 aa12.02□□□□□ -0.49
HLA-DMB-257ENST00000414017 VPS54Q9P1Q0 977 aa12.02□□□□□ -0.49
HLA-DMB-257ENST00000414017 DOCK3Q8IZD9 2030 aa12.01□□□□□ -0.49
HLA-DMB-257ENST00000414017 SMCO2A6NFE2 343 aa12.01□□□□□ -0.49
HLA-DMB-257ENST00000414017 GCOM1H8Y6P7 765 aaPredicted RBP12.01□□□□□ -0.49
HLA-DMB-257ENST00000414017 POLR2MP0CAP2 368 aa12.01□□□□□ -0.49
HLA-DMB-257ENST00000414017 ADCY7P51828 1080 aa12.01□□□□□ -0.49
HLA-DMB-257ENST00000414017 PRMT2P55345 433 aa12.01□□□□□ -0.49
HLA-DMB-257ENST00000414017 NLRP5P59047 1200 aa12.01□□□□□ -0.49
HLA-DMB-257ENST00000414017 UBE2SQ16763 222 aa12.01□□□□□ -0.49
HLA-DMB-257ENST00000414017 SLC9C1Q4G0N8 1177 aa12.01□□□□□ -0.49
HLA-DMB-257ENST00000414017 ABRAQ8N0Z2 381 aa12.01□□□□□ -0.49
HLA-DMB-257ENST00000414017 FAM184AQ8NB25 1140 aa12.01□□□□□ -0.49
HLA-DMB-257ENST00000414017 SH3TC2Q8TF17 1288 aa12.01□□□□□ -0.49
HLA-DMB-257ENST00000414017 ALG1Q9BT22 464 aa12.01□□□□□ -0.49
HLA-DMB-257ENST00000414017 MCOLN1Q9GZU1 580 aa12.01□□□□□ -0.49
HLA-DMB-257ENST00000414017 PSTPIP2Q9H939 334 aa12.01□□□□□ -0.49
HLA-DMB-257ENST00000414017 BARHL2Q9NY43 387 aa12.01□□□□□ -0.49
HLA-DMB-257ENST00000414017 hCG_1984214I3L0E3 225 aa12□□□□□ -0.49
HLA-DMB-257ENST00000414017 K7ELQ4 463 aaPredicted RBP12□□□□□ -0.49
HLA-DMB-257ENST00000414017 GRK4P32298 578 aa12□□□□□ -0.49
HLA-DMB-257ENST00000414017 UBXN2AP68543 259 aa12□□□□□ -0.49
HLA-DMB-257ENST00000414017 ZNF792Q3KQV3 632 aa12□□□□□ -0.49
HLA-DMB-257ENST00000414017 COL13A1Q5TAT6 717 aaPredicted RBP12□□□□□ -0.49
HLA-DMB-257ENST00000414017 TYW1BQ6NUM6 668 aa12□□□□□ -0.49
HLA-DMB-257ENST00000414017 FBXO46Q6PJ61 603 aaPredicted RBP12□□□□□ -0.49
HLA-DMB-257ENST00000414017 USP17L6PQ6QN14 398 aa12□□□□□ -0.49
HLA-DMB-257ENST00000414017 ZNF713Q8N859 430 aaPredicted RBP12□□□□□ -0.49
HLA-DMB-257ENST00000414017 SPRYD3Q8NCJ5 442 aa12□□□□□ -0.49
HLA-DMB-257ENST00000414017 IL27Q8NEV9 243 aa12□□□□□ -0.49
HLA-DMB-257ENST00000414017 CCDC148Q8NFR7 591 aa12□□□□□ -0.49
HLA-DMB-257ENST00000414017 SYTL5Q8TDW5 730 aaPredicted RBP12□□□□□ -0.49
HLA-DMB-257ENST00000414017 CCDC12Q8WUD4 166 aaPredicted RBP12□□□□□ -0.49
HLA-DMB-257ENST00000414017 WASF1Q92558 559 aa12□□□□□ -0.49
HLA-DMB-257ENST00000414017 USP6NLQ92738 828 aa12□□□□□ -0.49
HLA-DMB-257ENST00000414017 C6orf50Q9HD87 102 aa12□□□□□ -0.49
HLA-DMB-257ENST00000414017 FLRT1Q9NZU1 646 aa12□□□□□ -0.49
HLA-DMB-257ENST00000414017 DDX49Q9Y6V7 483 aaKnown RBP12□□□□□ -0.49
HLA-DMB-257ENST00000414017 STK36Q9NRP7 1315 aa12□□□□□ -0.49
HLA-DMB-257ENST00000414017 SOWAHBA6NEL2 793 aa11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 OPLAHO14841 1288 aa11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 HSP90AA1P07900 732 aaKnown RBP11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 XBP1P17861 261 aa11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 EIF2AK2P19525 551 aaKnown RBP11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 CYP2C19P33261 490 aa11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 GUCY1B3Q02153 619 aa11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 TRIM32Q13049 653 aa11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 IRF5Q13568 498 aa11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 TRIM29Q14134 588 aa11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 PKN2Q16513 984 aaKnown RBP11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 ARHGEF16Q5VV41 709 aa11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 MFSD14CQ5VZR4 134 aa11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 PPP1R18Q6NYC8 613 aa11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 SLAIN1Q8ND83 568 aa11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 TRIB2Q92519 343 aa11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 MAML3Q96JK9 1138 aa11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 PGBD1Q96JS3 809 aa11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 TAAR1Q96RJ0 339 aa11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 LLPHQ9BRT6 129 aaKnown RBP11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 GJB4Q9NTQ9 266 aa11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 COL20A1Q9P218 1284 aa11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 ADD3Q9UEY8 706 aaKnown RBP11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 KCNJ14Q9UNX9 436 aa11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 SMC3Q9UQE7 1217 aa11.99□□□□□ -0.49
HLA-DMB-257ENST00000414017 ZNFX1Q9P2E3 1918 aaKnown RBP11.98□□□□□ -0.49
HLA-DMB-257ENST00000414017 DNAJC25-GNG10A0A024R161 153 aa11.98□□□□□ -0.49
HLA-DMB-257ENST00000414017 SPDYE3A6NKU9 549 aa11.98□□□□□ -0.49
HLA-DMB-257ENST00000414017 INHAP05111 366 aa11.98□□□□□ -0.49
HLA-DMB-257ENST00000414017 MYCLP12524 364 aaPredicted RBP11.98□□□□□ -0.49
HLA-DMB-257ENST00000414017 FDPSP14324 419 aaKnown RBP11.98□□□□□ -0.49
HLA-DMB-257ENST00000414017 CNGA1P29973 690 aa11.98□□□□□ -0.49
HLA-DMB-257ENST00000414017 ALDH5A1P51649 535 aaPredicted RBP11.98□□□□□ -0.49
HLA-DMB-257ENST00000414017 HSD17B4P51659 736 aa11.98□□□□□ -0.49
HLA-DMB-257ENST00000414017 MRPL12P52815 198 aaKnown RBP11.98□□□□□ -0.49
HLA-DMB-257ENST00000414017 HMGN5P82970 282 aaKnown RBP11.98□□□□□ -0.49
HLA-DMB-257ENST00000414017 PRAMEF19Q5SWL8 479 aa11.98□□□□□ -0.49
HLA-DMB-257ENST00000414017 JAKMIP3Q5VZ66 844 aa11.98□□□□□ -0.49
HLA-DMB-257ENST00000414017 EEPD1Q7L9B9 569 aa11.98□□□□□ -0.49
HLA-DMB-257ENST00000414017 FAM133AQ8N9E0 248 aa11.98□□□□□ -0.49
HLA-DMB-257ENST00000414017 RGS22Q8NE09 1264 aa11.98□□□□□ -0.49
HLA-DMB-257ENST00000414017 RASGRP4Q8TDF6 673 aa11.98□□□□□ -0.49
HLA-DMB-257ENST00000414017 RMDN3Q96TC7 470 aa11.98□□□□□ -0.49
HLA-DMB-257ENST00000414017 RIC8AQ9NPQ8 531 aa11.98□□□□□ -0.49
HLA-DMB-257ENST00000414017 TMEM260Q9NX78 707 aa11.98□□□□□ -0.49
HLA-DMB-257ENST00000414017 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.98□□□□□ -0.49
HLA-DMB-257ENST00000414017 HMGCRP04035 888 aa11.97□□□□□ -0.49
HLA-DMB-257ENST00000414017 HOXC6P09630 235 aa11.97□□□□□ -0.49
HLA-DMB-257ENST00000414017 XRCC5P13010 732 aaKnown RBP11.97□□□□□ -0.49
HLA-DMB-257ENST00000414017 PRKAR2AP13861 404 aaKnown RBP11.97□□□□□ -0.49
HLA-DMB-257ENST00000414017 GJB2P29033 226 aa11.97□□□□□ -0.49
HLA-DMB-257ENST00000414017 GNA11P29992 359 aa11.97□□□□□ -0.49
HLA-DMB-257ENST00000414017 PDE4DQ08499 809 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms