RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 FAM209AQ5JX71 171 aa5.72□□□□□ -1.49
HMGB1P11-201ENST00000413899 GIMAP6Q6P9H5 292 aa5.72□□□□□ -1.49
HMGB1P11-201ENST00000413899 RSPO2Q6UXX9 243 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P11-201ENST00000413899 CCDC103Q8IW40 242 aa5.72□□□□□ -1.49
HMGB1P11-201ENST00000413899 ABHD4Q8TB40 342 aa5.72□□□□□ -1.49
HMGB1P11-201ENST00000413899 KIRREL1Q96J84 757 aa5.72□□□□□ -1.49
HMGB1P11-201ENST00000413899 CDC6Q99741 560 aa5.72□□□□□ -1.49
HMGB1P11-201ENST00000413899 CRTAC1Q9NQ79 661 aa5.72□□□□□ -1.49
HMGB1P11-201ENST00000413899 MRPS23Q9Y3D9 190 aaKnown RBP5.72□□□□□ -1.49
HMGB1P11-201ENST00000413899 TAF6LQ9Y6J9 622 aa5.72□□□□□ -1.49
HMGB1P11-201ENST00000413899 TLDC2A0PJX2 215 aa5.71□□□□□ -1.5
HMGB1P11-201ENST00000413899 EFEMP2O95967 443 aa5.71□□□□□ -1.5
HMGB1P11-201ENST00000413899 TRHRP34981 398 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P11-201ENST00000413899 LAPTM5Q13571 262 aa5.71□□□□□ -1.5
HMGB1P11-201ENST00000413899 FYB2Q5VWT5 728 aa5.71□□□□□ -1.5
HMGB1P11-201ENST00000413899 MBLAC2Q68D91 279 aa5.71□□□□□ -1.5
HMGB1P11-201ENST00000413899 JAMLQ86YT9 394 aa5.71□□□□□ -1.5
HMGB1P11-201ENST00000413899 PPIL6Q8IXY8 311 aa5.71□□□□□ -1.5
HMGB1P11-201ENST00000413899 DCAF4Q8WV16 495 aa5.71□□□□□ -1.5
HMGB1P11-201ENST00000413899 DIO2Q92813 273 aa5.71□□□□□ -1.5
HMGB1P11-201ENST00000413899 IPO9Q96P70 1041 aaKnown RBP5.71□□□□□ -1.5
HMGB1P11-201ENST00000413899 PLCD4Q9BRC7 762 aa5.71□□□□□ -1.5
HMGB1P11-201ENST00000413899 C19orf44Q9H6X5 657 aa5.71□□□□□ -1.5
HMGB1P11-201ENST00000413899 KANSL2Q9H9L4 492 aa5.71□□□□□ -1.5
HMGB1P11-201ENST00000413899 GPR27Q9NS67 375 aa5.71□□□□□ -1.5
HMGB1P11-201ENST00000413899 TMEFF2Q9UIK5 374 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P11-201ENST00000413899 C7orf72A4D263 438 aa5.7□□□□□ -1.5
HMGB1P11-201ENST00000413899 NPHS1O60500 1241 aa5.7□□□□□ -1.5
HMGB1P11-201ENST00000413899 PSPNO60542 156 aa5.7□□□□□ -1.5
HMGB1P11-201ENST00000413899 C6orf222P0C671 652 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P11-201ENST00000413899 MVKQ03426 396 aa5.7□□□□□ -1.5
HMGB1P11-201ENST00000413899 INF2Q27J81 1249 aa5.7□□□□□ -1.5
HMGB1P11-201ENST00000413899 STYK1Q6J9G0 422 aa5.7□□□□□ -1.5
HMGB1P11-201ENST00000413899 CPNE8Q86YQ8 564 aa5.7□□□□□ -1.5
HMGB1P11-201ENST00000413899 ZFYVE21Q9BQ24 234 aa5.7□□□□□ -1.5
HMGB1P11-201ENST00000413899 RNF32Q9H0A6 362 aa5.7□□□□□ -1.5
HMGB1P11-201ENST00000413899 IMPACTQ9P2X3 320 aa5.7□□□□□ -1.5
HMGB1P11-201ENST00000413899 TMA7Q9Y2S6 64 aaKnown RBP5.7□□□□□ -1.5
HMGB1P11-201ENST00000413899 YBX2Q9Y2T7 364 aaKnown RBP5.7□□□□□ -1.5
HMGB1P11-201ENST00000413899 MRPL42Q9Y6G3 142 aaKnown RBP5.7□□□□□ -1.5
HMGB1P11-201ENST00000413899 LOC100996750A0A140TA64 210 aa5.69□□□□□ -1.5
HMGB1P11-201ENST00000413899 ENPP3O14638 875 aa5.69□□□□□ -1.5
HMGB1P11-201ENST00000413899 KCNQ2O43526 872 aa5.69□□□□□ -1.5
HMGB1P11-201ENST00000413899 GLI1P08151 1106 aa5.69□□□□□ -1.5
HMGB1P11-201ENST00000413899 PNLIPP16233 465 aa5.69□□□□□ -1.5
HMGB1P11-201ENST00000413899 GABREP78334 506 aa5.69□□□□□ -1.5
HMGB1P11-201ENST00000413899 TRIM61Q5EBN2 209 aa5.69□□□□□ -1.5
HMGB1P11-201ENST00000413899 USP53Q70EK8 1073 aa5.69□□□□□ -1.5
HMGB1P11-201ENST00000413899 MAMDC2Q7Z304 686 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P11-201ENST00000413899 ZSWIM9Q86XI8 627 aa5.69□□□□□ -1.5
HMGB1P11-201ENST00000413899 Q8N1Y9 231 aa5.69□□□□□ -1.5
HMGB1P11-201ENST00000413899 SYNPOQ8N3V7 929 aa5.69□□□□□ -1.5
HMGB1P11-201ENST00000413899 RCBTB1Q8NDN9 531 aa5.69□□□□□ -1.5
HMGB1P11-201ENST00000413899 MTA3Q9BTC8 594 aa5.69□□□□□ -1.5
HMGB1P11-201ENST00000413899 MRPL4Q9BYD3 311 aaKnown RBP5.69□□□□□ -1.5
HMGB1P11-201ENST00000413899 KRTAP4-6Q9BYQ5 205 aa5.69□□□□□ -1.5
HMGB1P11-201ENST00000413899 PDLIM7Q9NR12 457 aa5.69□□□□□ -1.5
HMGB1P11-201ENST00000413899 GPR160Q9UJ42 338 aa5.69□□□□□ -1.5
HMGB1P11-201ENST00000413899 CARMIL2Q6F5E8 1435 aa5.68□□□□□ -1.5
HMGB1P11-201ENST00000413899 ESYT3A0FGR9 886 aa5.68□□□□□ -1.5
HMGB1P11-201ENST00000413899 PRKCAP17252 672 aa5.68□□□□□ -1.5
HMGB1P11-201ENST00000413899 GTF2A2P52657 109 aa5.68□□□□□ -1.5
HMGB1P11-201ENST00000413899 KCNMB1Q16558 191 aa5.68□□□□□ -1.5
HMGB1P11-201ENST00000413899 HOMER1Q86YM7 354 aa5.68□□□□□ -1.5
HMGB1P11-201ENST00000413899 NLGN1Q8N2Q7 840 aa5.68□□□□□ -1.5
HMGB1P11-201ENST00000413899 GSTCDQ8NEC7 633 aa5.68□□□□□ -1.5
HMGB1P11-201ENST00000413899 NUP43Q8NFH3 380 aa5.68□□□□□ -1.5
HMGB1P11-201ENST00000413899 APPBP2Q92624 585 aa5.68□□□□□ -1.5
HMGB1P11-201ENST00000413899 DPF3Q92784 378 aa5.68□□□□□ -1.5
HMGB1P11-201ENST00000413899 PTPRN2Q92932 1015 aa5.68□□□□□ -1.5
HMGB1P11-201ENST00000413899 PHF20Q9BVI0 1012 aa5.68□□□□□ -1.5
HMGB1P11-201ENST00000413899 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.68□□□□□ -1.5
HMGB1P11-201ENST00000413899 TIMM13Q9Y5L4 95 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P11-201ENST00000413899 BLACEA4D250 179 aa5.67□□□□□ -1.5
HMGB1P11-201ENST00000413899 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P11-201ENST00000413899 PLD2O14939 933 aa5.67□□□□□ -1.5
HMGB1P11-201ENST00000413899 MYO1BO43795 1136 aa5.67□□□□□ -1.5
HMGB1P11-201ENST00000413899 PPP1R11O60927 126 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P11-201ENST00000413899 MSL3P1P0C860 447 aa5.67□□□□□ -1.5
HMGB1P11-201ENST00000413899 ERVFRD-1P60508 538 aa5.67□□□□□ -1.5
HMGB1P11-201ENST00000413899 GPR85P60893 370 aa5.67□□□□□ -1.5
HMGB1P11-201ENST00000413899 RPL11P62913 178 aaKnown RBP5.67□□□□□ -1.5
HMGB1P11-201ENST00000413899 CYP4F8P98187 520 aa5.67□□□□□ -1.5
HMGB1P11-201ENST00000413899 KIR3DS1Q14943 382 aa5.67□□□□□ -1.5
HMGB1P11-201ENST00000413899 XP32Q5T750 250 aa5.67□□□□□ -1.5
HMGB1P11-201ENST00000413899 C16orf86Q6ZW13 317 aa5.67□□□□□ -1.5
HMGB1P11-201ENST00000413899 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGB1P11-201ENST00000413899 FAM168AQ92567 244 aa5.67□□□□□ -1.5
HMGB1P11-201ENST00000413899 INTS4Q96HW7 963 aaKnown RBP5.67□□□□□ -1.5
HMGB1P11-201ENST00000413899 SLC6A17Q9H1V8 727 aa5.67□□□□□ -1.5
HMGB1P11-201ENST00000413899 NCOA5Q9HCD5 579 aaKnown RBP5.67□□□□□ -1.5
HMGB1P11-201ENST00000413899 FANCLQ9NW38 375 aa5.67□□□□□ -1.5
HMGB1P11-201ENST00000413899 A0A1W2PQ27 194 aa5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 A0A1W2PQ64 194 aa5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 A0A1W2PQC6 194 aa5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 A0A1W2PQD8 194 aa5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 AQP7O14520 342 aa5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 EFCAB14O75071 495 aa5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 CDC45O75419 566 aa5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 RFPL3O75679 317 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms