RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 OSBPL9Q96SU4 736 aa16.24■□□□□ 0.19
SEMA3F-202ENST00000413852 GOLPH3Q9H4A6 298 aa16.24■□□□□ 0.19
SEMA3F-202ENST00000413852 MCM9Q9NXL9 1143 aa16.24■□□□□ 0.19
SEMA3F-202ENST00000413852 LONP1P36776 959 aaKnown RBP16.24■□□□□ 0.19
SEMA3F-202ENST00000413852 CARSP49589 748 aaKnown RBP16.24■□□□□ 0.19
SEMA3F-202ENST00000413852 CCDC152Q4G0S7 254 aa16.24■□□□□ 0.19
SEMA3F-202ENST00000413852 GPATCH11Q8N954 259 aa16.24■□□□□ 0.19
SEMA3F-202ENST00000413852 MTMR8Q96EF0 704 aa16.24■□□□□ 0.19
SEMA3F-202ENST00000413852 LRRC53A6NM62 1247 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 BACH1O14867 736 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 FTCDO95954 541 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 EEF1GP26641 437 aaKnown RBP16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 KIF11P52732 1056 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 ZBED6P86452 979 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 CKAP4Q07065 602 aaKnown RBP16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 SPA17Q15506 151 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 CADPS2Q86UW7 1296 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 MSL3Q8N5Y2 521 aaKnown RBP16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 KIAA0895Q8NCT3 520 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 PPM1EQ8WY54 764 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 FAM84BQ96KN1 310 aaPredicted RBP16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 THAP9Q9H5L6 903 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 NFU1Q9UMS0 254 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 AKR1B10O60218 316 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 CCNT1O60563 726 aaKnown RBP16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 GLI1P08151 1106 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 VAV2P52735 878 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 GUCY1A3Q02108 690 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 HAUS3Q68CZ6 603 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 CABP7Q86V35 215 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 CELF1Q92879 486 aaKnown RBP16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 FAM184BQ9ULE4 1060 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 A0A1W2PQC6 194 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 SLC1A4P43007 532 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 TXNRD3Q86VQ6 643 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 ZIM3Q96PE6 472 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 PCDHA4Q9UN74 947 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 STX8Q9UNK0 236 aa16.23■□□□□ 0.19
SEMA3F-202ENST00000413852 MYO1FO00160 1098 aa16.22■□□□□ 0.19
SEMA3F-202ENST00000413852 RHOBTB3O94955 611 aa16.22■□□□□ 0.19
SEMA3F-202ENST00000413852 ERFEQ4G0M1 354 aa16.22■□□□□ 0.19
SEMA3F-202ENST00000413852 CCDC181Q5TID7 509 aa16.22■□□□□ 0.19
SEMA3F-202ENST00000413852 PNMA1Q8ND90 353 aa16.22■□□□□ 0.19
SEMA3F-202ENST00000413852 CENPHQ9H3R5 247 aa16.22■□□□□ 0.19
SEMA3F-202ENST00000413852 KBTBD4Q9NVX7 518 aa16.22■□□□□ 0.19
SEMA3F-202ENST00000413852 TMEM260Q9NX78 707 aa16.22■□□□□ 0.19
SEMA3F-202ENST00000413852 TBC1D7Q9P0N9 293 aa16.22■□□□□ 0.19
SEMA3F-202ENST00000413852 SAP30BPQ9UHR5 308 aaKnown RBP16.22■□□□□ 0.19
SEMA3F-202ENST00000413852 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.22■□□□□ 0.19
SEMA3F-202ENST00000413852 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.22■□□□□ 0.19
SEMA3F-202ENST00000413852 DDAH1O94760 285 aa16.22■□□□□ 0.19
SEMA3F-202ENST00000413852 SEC24CP53992 1094 aa16.22■□□□□ 0.19
SEMA3F-202ENST00000413852 TRIM9Q9C026 710 aa16.22■□□□□ 0.19
SEMA3F-202ENST00000413852 DUOX1Q9NRD9 1551 aa16.21■□□□□ 0.19
SEMA3F-202ENST00000413852 LOC102724159A0A0B4J2E5 919 aa16.21■□□□□ 0.19
SEMA3F-202ENST00000413852 TARSL2A2RTX5 802 aaKnown RBP16.21■□□□□ 0.19
SEMA3F-202ENST00000413852 PWP2Q15269 919 aaKnown RBP16.21■□□□□ 0.19
SEMA3F-202ENST00000413852 INTS5Q6P9B9 1019 aaKnown RBP16.21■□□□□ 0.19
SEMA3F-202ENST00000413852 CCDC43Q96MW1 224 aaKnown RBP16.21■□□□□ 0.19
SEMA3F-202ENST00000413852 SH2D4AQ9H788 454 aa16.21■□□□□ 0.19
SEMA3F-202ENST00000413852 TXKP42681 527 aa16.21■□□□□ 0.19
SEMA3F-202ENST00000413852 RCAN1P53805 252 aa16.21■□□□□ 0.19
SEMA3F-202ENST00000413852 NSUN4Q96CB9 384 aaKnown RBP16.21■□□□□ 0.19
SEMA3F-202ENST00000413852 TANGO6Q9C0B7 1094 aa16.21■□□□□ 0.19
SEMA3F-202ENST00000413852 MYH3P11055 1940 aa16.21■□□□□ 0.19
SEMA3F-202ENST00000413852 ZNF142P52746 1687 aaPredicted RBP16.21■□□□□ 0.19
SEMA3F-202ENST00000413852 BCORQ6W2J9 1755 aa16.21■□□□□ 0.19
SEMA3F-202ENST00000413852 ERLIN2O94905 339 aa16.21■□□□□ 0.18
SEMA3F-202ENST00000413852 CALM1P0DP23 149 aa16.21■□□□□ 0.18
SEMA3F-202ENST00000413852 CALM2P0DP24 149 aa16.21■□□□□ 0.18
SEMA3F-202ENST00000413852 CALM3P0DP25 149 aa16.21■□□□□ 0.18
SEMA3F-202ENST00000413852 CRKLP46109 303 aaKnown RBP16.21■□□□□ 0.18
SEMA3F-202ENST00000413852 PURBQ96QR8 312 aaKnown RBP16.21■□□□□ 0.18
SEMA3F-202ENST00000413852 FLT1P17948 1338 aa16.2■□□□□ 0.18
SEMA3F-202ENST00000413852 EBAG9O00559 213 aa16.2■□□□□ 0.18
SEMA3F-202ENST00000413852 CCNE1P24864 410 aa16.2■□□□□ 0.18
SEMA3F-202ENST00000413852 ATP6V1AP38606 617 aa16.2■□□□□ 0.18
SEMA3F-202ENST00000413852 TUBB4BP68371 445 aa16.2■□□□□ 0.18
SEMA3F-202ENST00000413852 GUCY2DQ02846 1103 aa16.2■□□□□ 0.18
SEMA3F-202ENST00000413852 GPR101Q96P66 508 aaPredicted RBP16.2■□□□□ 0.18
SEMA3F-202ENST00000413852 NUDT12Q9BQG2 462 aa16.2■□□□□ 0.18
SEMA3F-202ENST00000413852 BIN2Q9UBW5 565 aaPredicted RBP16.2■□□□□ 0.18
SEMA3F-202ENST00000413852 NUP98P52948 1817 aa16.2■□□□□ 0.18
SEMA3F-202ENST00000413852 PAPPAQ13219 1627 aa16.2■□□□□ 0.18
SEMA3F-202ENST00000413852 SHOX2O60902 331 aaPredicted RBP16.2■□□□□ 0.18
SEMA3F-202ENST00000413852 TACC1O75410 805 aa16.2■□□□□ 0.18
SEMA3F-202ENST00000413852 NTSR2O95665 410 aa16.2■□□□□ 0.18
SEMA3F-202ENST00000413852 MAGEA1P43355 309 aa16.2■□□□□ 0.18
SEMA3F-202ENST00000413852 GRIK5Q16478 980 aa16.2■□□□□ 0.18
SEMA3F-202ENST00000413852 TDRD12Q587J7 1177 aaKnown RBP16.2■□□□□ 0.18
SEMA3F-202ENST00000413852 KCNV1Q6PIU1 500 aa16.2■□□□□ 0.18
SEMA3F-202ENST00000413852 OR2W6PQ8NHA6 318 aa16.2■□□□□ 0.18
SEMA3F-202ENST00000413852 TLR10Q9BXR5 811 aa16.2■□□□□ 0.18
SEMA3F-202ENST00000413852 EPB41L5Q9HCM4 733 aa16.2■□□□□ 0.18
SEMA3F-202ENST00000413852 EIF3HO15372 352 aaKnown RBP eCLIP16.19■□□□□ 0.18
SEMA3F-202ENST00000413852 CACNB1Q02641 598 aaPredicted RBP16.19■□□□□ 0.18
SEMA3F-202ENST00000413852 EFCAB13Q8IY85 973 aa16.19■□□□□ 0.18
SEMA3F-202ENST00000413852 RNPC3Q96LT9 517 aaKnown RBP16.19■□□□□ 0.18
SEMA3F-202ENST00000413852 BRIP1Q9BX63 1249 aa16.19■□□□□ 0.18
SEMA3F-202ENST00000413852 PARP4Q9UKK3 1724 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms