RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 GPR27Q9NS67 375 aa6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 AP5S1Q9NUS5 200 aa6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 TCFL5Q9UL49 500 aa6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 U3KQE9 123 aa6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 NPHP3-ACAD11A0A0J9YXS1 232 aa6.5□□□□□ -1.37
HMGB3P31-201ENST00000413333 WDR64B1ANS9 1081 aa6.5□□□□□ -1.37
HMGB3P31-201ENST00000413333 PAMP19021 973 aa6.5□□□□□ -1.37
HMGB3P31-201ENST00000413333 SCNN1BP51168 640 aa6.5□□□□□ -1.37
HMGB3P31-201ENST00000413333 NKPD1Q17RQ9 610 aa6.5□□□□□ -1.37
HMGB3P31-201ENST00000413333 SKOR2Q2VWA4 1001 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P31-201ENST00000413333 RTP2Q5QGT7 225 aa6.5□□□□□ -1.37
HMGB3P31-201ENST00000413333 EEF1DP3Q658K8 133 aa6.5□□□□□ -1.37
HMGB3P31-201ENST00000413333 E4F1Q66K89 784 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P31-201ENST00000413333 RNF43Q68DV7 783 aa6.5□□□□□ -1.37
HMGB3P31-201ENST00000413333 ABHD17CQ6PCB6 329 aa6.5□□□□□ -1.37
HMGB3P31-201ENST00000413333 RSPO2Q6UXX9 243 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P31-201ENST00000413333 CPNE8Q86YQ8 564 aa6.5□□□□□ -1.37
HMGB3P31-201ENST00000413333 NXPE1Q8N323 547 aa6.5□□□□□ -1.37
HMGB3P31-201ENST00000413333 OR2W6PQ8NHA6 318 aa6.5□□□□□ -1.37
HMGB3P31-201ENST00000413333 PI4K2BQ8TCG2 481 aa6.5□□□□□ -1.37
HMGB3P31-201ENST00000413333 ZFYVE21Q9BQ24 234 aa6.5□□□□□ -1.37
HMGB3P31-201ENST00000413333 ATG3Q9NT62 314 aa6.5□□□□□ -1.37
HMGB3P31-201ENST00000413333 SLC5A4Q9NY91 659 aa6.5□□□□□ -1.37
HMGB3P31-201ENST00000413333 NPFFR2Q9Y5X5 522 aa6.5□□□□□ -1.37
HMGB3P31-201ENST00000413333 ZNF891A8MT65 544 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 M0R2C6 588 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 ZNF205O95201 554 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 CEACAM5P06731 702 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 KCNA6P17658 529 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 LTKP29376 864 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 TMPRSS15P98073 1019 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 KCNAB2Q13303 367 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 LAPTM5Q13571 262 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 STAT4Q14765 748 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 SART3Q15020 963 aaKnown RBP6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 DHCR24Q15392 516 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 IQCEQ6IPM2 695 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 RCSD1Q6JBY9 416 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 LBX2Q6XYB7 198 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 FMNL3Q8IVF7 1028 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 NAT16Q8N8M0 369 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 IGSF22Q8N9C0 903 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 LINC00116Q8NCU8 138 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 RCBTB1Q8NDN9 531 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 DCAF5Q96JK2 942 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 CHAMP1Q96JM3 812 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 TTC1Q99614 292 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 ALG1Q9BT22 464 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 IFT22Q9H7X7 185 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 DUSP13Q9UII6 198 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 COQ6Q9Y2Z9 468 aa6.49□□□□□ -1.37
HMGB3P31-201ENST00000413333 BRINP1O60477 761 aa6.48□□□□□ -1.37
HMGB3P31-201ENST00000413333 ALDH1L1O75891 902 aa6.48□□□□□ -1.37
HMGB3P31-201ENST00000413333 GLRX3O76003 335 aaKnown RBP6.48□□□□□ -1.37
HMGB3P31-201ENST00000413333 ID4P47928 161 aa6.48□□□□□ -1.37
HMGB3P31-201ENST00000413333 DNM2P50570 870 aa6.48□□□□□ -1.37
HMGB3P31-201ENST00000413333 ITKQ08881 620 aa6.48□□□□□ -1.37
HMGB3P31-201ENST00000413333 NFIAQ12857 509 aa6.48□□□□□ -1.37
HMGB3P31-201ENST00000413333 INF2Q27J81 1249 aa6.48□□□□□ -1.37
HMGB3P31-201ENST00000413333 HSP90AB2PQ58FF8 381 aa6.48□□□□□ -1.37
HMGB3P31-201ENST00000413333 RNF219Q5W0B1 726 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P31-201ENST00000413333 ZPBP2Q6X784 338 aa6.48□□□□□ -1.37
HMGB3P31-201ENST00000413333 CREG2Q8IUH2 290 aa6.48□□□□□ -1.37
HMGB3P31-201ENST00000413333 SPACA3Q8IXA5 215 aa6.48□□□□□ -1.37
HMGB3P31-201ENST00000413333 SHKBP1Q8TBC3 707 aa6.48□□□□□ -1.37
HMGB3P31-201ENST00000413333 MTMR8Q96EF0 704 aa6.48□□□□□ -1.37
HMGB3P31-201ENST00000413333 PTCHD1Q96NR3 888 aa6.48□□□□□ -1.37
HMGB3P31-201ENST00000413333 SMAD5Q99717 465 aaKnown RBP6.48□□□□□ -1.37
HMGB3P31-201ENST00000413333 METTL22Q9BUU2 404 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P31-201ENST00000413333 TCEAL9Q9UHQ7 104 aa6.48□□□□□ -1.37
HMGB3P31-201ENST00000413333 PLAGL2Q9UPG8 496 aa6.48□□□□□ -1.37
HMGB3P31-201ENST00000413333 THRAP3Q9Y2W1 955 aaKnown RBP6.48□□□□□ -1.37
HMGB3P31-201ENST00000413333 PCDHA2Q9Y5H9 948 aa6.48□□□□□ -1.37
HMGB3P31-201ENST00000413333 PHLDB1Q86UU1 1377 aa6.47□□□□□ -1.37
HMGB3P31-201ENST00000413333 RNF225M0QZC1 329 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P31-201ENST00000413333 ARVCFO00192 962 aa6.47□□□□□ -1.37
HMGB3P31-201ENST00000413333 NEMP1O14524 444 aa6.47□□□□□ -1.37
HMGB3P31-201ENST00000413333 FGF10O15520 208 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P31-201ENST00000413333 GPR39O43194 453 aa6.47□□□□□ -1.37
HMGB3P31-201ENST00000413333 PYGMP11217 842 aa6.47□□□□□ -1.37
HMGB3P31-201ENST00000413333 RPL10P27635 214 aaKnown RBP6.47□□□□□ -1.37
HMGB3P31-201ENST00000413333 IL2P60568 153 aa6.47□□□□□ -1.37
HMGB3P31-201ENST00000413333 PAK1Q13153 545 aa6.47□□□□□ -1.37
HMGB3P31-201ENST00000413333 RAVER1Q8IY67 606 aaKnown RBP6.47□□□□□ -1.37
HMGB3P31-201ENST00000413333 GPR101Q96P66 508 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P31-201ENST00000413333 MMP19Q99542 508 aa6.47□□□□□ -1.37
HMGB3P31-201ENST00000413333 DBNDD2Q9BQY9 259 aa6.47□□□□□ -1.37
HMGB3P31-201ENST00000413333 IPPKQ9H8X2 491 aa6.47□□□□□ -1.37
HMGB3P31-201ENST00000413333 PCDHA11Q9Y5I1 949 aa6.47□□□□□ -1.37
HMGB3P31-201ENST00000413333 EID1Q9Y6B2 187 aa6.47□□□□□ -1.37
HMGB3P31-201ENST00000413333 TRBV23OR9-2A0A075B6M9 112 aa6.46□□□□□ -1.38
HMGB3P31-201ENST00000413333 FAM181BA6NEQ2 426 aa6.46□□□□□ -1.38
HMGB3P31-201ENST00000413333 MYO1BO43795 1136 aa6.46□□□□□ -1.38
HMGB3P31-201ENST00000413333 SOD2P04179 222 aa6.46□□□□□ -1.38
HMGB3P31-201ENST00000413333 ST5P78524 1137 aa6.46□□□□□ -1.38
HMGB3P31-201ENST00000413333 EGR3Q06889 387 aa6.46□□□□□ -1.38
HMGB3P31-201ENST00000413333 MTMR1Q13613 665 aa6.46□□□□□ -1.38
HMGB3P31-201ENST00000413333 TTF1Q15361 905 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms