RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 FOXD4L6Q3SYB3 417 aaPredicted RBP29.73■■■□□ 2.35
RHBDD3-203ENST00000413137 FOXD4L3Q6VB84 417 aaPredicted RBP29.73■■■□□ 2.35
RHBDD3-203ENST00000413137 REXO1Q8N1G1 1221 aaKnown RBP29.73■■■□□ 2.35
RHBDD3-203ENST00000413137 ACAD9Q9H845 621 aa29.73■■■□□ 2.35
RHBDD3-203ENST00000413137 FAM110CQ1W6H9 321 aa29.73■■■□□ 2.35
RHBDD3-203ENST00000413137 NOSTRINQ8IVI9 506 aa29.73■■■□□ 2.35
RHBDD3-203ENST00000413137 BRMS1Q9HCU9 246 aa29.73■■■□□ 2.35
RHBDD3-203ENST00000413137 GNL2Q13823 731 aaKnown RBP29.72■■■□□ 2.35
RHBDD3-203ENST00000413137 NSMFQ6X4W1 530 aa29.72■■■□□ 2.35
RHBDD3-203ENST00000413137 SLC30A10Q6XR72 485 aa29.72■■■□□ 2.35
RHBDD3-203ENST00000413137 CHST13Q8NET6 341 aa29.72■■■□□ 2.35
RHBDD3-203ENST00000413137 BICD2Q8TD16 824 aa29.72■■■□□ 2.35
RHBDD3-203ENST00000413137 COL20A1Q9P218 1284 aa29.72■■■□□ 2.35
RHBDD3-203ENST00000413137 GCOM1H8Y6P7 765 aaPredicted RBP29.71■■■□□ 2.35
RHBDD3-203ENST00000413137 PIK3CDO00329 1044 aa29.71■■■□□ 2.35
RHBDD3-203ENST00000413137 SLC25A27O95847 323 aa29.71■■■□□ 2.35
RHBDD3-203ENST00000413137 ALDH1A1P00352 501 aa29.71■■■□□ 2.35
RHBDD3-203ENST00000413137 POLR2MP0CAP2 368 aa29.71■■■□□ 2.35
RHBDD3-203ENST00000413137 HSD17B4P51659 736 aa29.71■■■□□ 2.35
RHBDD3-203ENST00000413137 PIK3AP1Q6ZUJ8 805 aa29.71■■■□□ 2.35
RHBDD3-203ENST00000413137 PURBQ96QR8 312 aaKnown RBP29.71■■■□□ 2.35
RHBDD3-203ENST00000413137 A1CFQ9NQ94 594 aaKnown RBP29.71■■■□□ 2.35
RHBDD3-203ENST00000413137 RNF186Q9NXI6 227 aa29.71■■■□□ 2.35
RHBDD3-203ENST00000413137 TBC1D8O95759 1140 aa29.7■■■□□ 2.35
RHBDD3-203ENST00000413137 RPS6P62753 249 aaKnown RBP29.7■■■□□ 2.35
RHBDD3-203ENST00000413137 GHRHRQ02643 423 aa29.7■■■□□ 2.35
RHBDD3-203ENST00000413137 BAATQ14032 418 aaPredicted RBP29.7■■■□□ 2.35
RHBDD3-203ENST00000413137 FCHSD1Q86WN1 690 aa29.7■■■□□ 2.35
RHBDD3-203ENST00000413137 MCF2L2Q86YR7 1114 aa29.7■■■□□ 2.35
RHBDD3-203ENST00000413137 TRPA1O75762 1119 aa29.69■■■□□ 2.34
RHBDD3-203ENST00000413137 ECM2O94769 699 aaPredicted RBP29.69■■■□□ 2.34
RHBDD3-203ENST00000413137 GLT8D2Q9H1C3 349 aa29.69■■■□□ 2.34
RHBDD3-203ENST00000413137 THSD7BQ9C0I4 1608 aa29.69■■■□□ 2.34
RHBDD3-203ENST00000413137 WDR78Q5VTH9 848 aa29.69■■■□□ 2.34
RHBDD3-203ENST00000413137 RNF207Q6ZRF8 634 aa29.69■■■□□ 2.34
RHBDD3-203ENST00000413137 SHCBP1Q8NEM2 672 aa29.69■■■□□ 2.34
RHBDD3-203ENST00000413137 SYTL5Q8TDW5 730 aaPredicted RBP29.69■■■□□ 2.34
RHBDD3-203ENST00000413137 ZSCAN16Q9H4T2 348 aaPredicted RBP29.69■■■□□ 2.34
RHBDD3-203ENST00000413137 CYP39A1Q9NYL5 469 aa29.69■■■□□ 2.34
RHBDD3-203ENST00000413137 CCNA1P78396 465 aa29.68■■■□□ 2.34
RHBDD3-203ENST00000413137 TNPO1Q92973 898 aaKnown RBP29.68■■■□□ 2.34
RHBDD3-203ENST00000413137 MROH8Q9H579 483 aa29.68■■■□□ 2.34
RHBDD3-203ENST00000413137 FBXO40Q9UH90 709 aa29.67■■■□□ 2.34
RHBDD3-203ENST00000413137 WNT7AO00755 349 aa29.66■■■□□ 2.34
RHBDD3-203ENST00000413137 TOB1P50616 345 aaPredicted RBP29.66■■■□□ 2.34
RHBDD3-203ENST00000413137 BRAPQ7Z569 592 aa29.66■■■□□ 2.34
RHBDD3-203ENST00000413137 CCDC194A0A1B0GVG4 234 aa29.65■■■□□ 2.34
RHBDD3-203ENST00000413137 EDIL3O43854 480 aa29.65■■■□□ 2.34
RHBDD3-203ENST00000413137 COPB2P35606 906 aa29.65■■■□□ 2.34
RHBDD3-203ENST00000413137 INF2Q27J81 1249 aa29.65■■■□□ 2.34
RHBDD3-203ENST00000413137 ANKRD35Q8N283 1001 aa29.65■■■□□ 2.34
RHBDD3-203ENST00000413137 ANO3Q9BYT9 981 aa29.65■■■□□ 2.34
RHBDD3-203ENST00000413137 NBR1Q14596 966 aa29.64■■■□□ 2.34
RHBDD3-203ENST00000413137 MYSM1Q5VVJ2 828 aa29.64■■■□□ 2.34
RHBDD3-203ENST00000413137 KRT25Q7Z3Z0 450 aa29.64■■■□□ 2.34
RHBDD3-203ENST00000413137 DNAJC5GQ8N7S2 189 aa29.64■■■□□ 2.34
RHBDD3-203ENST00000413137 TAAR1Q96RJ0 339 aa29.64■■■□□ 2.34
RHBDD3-203ENST00000413137 PGK2P07205 417 aa29.64■■■□□ 2.33
RHBDD3-203ENST00000413137 CNTN2Q02246 1040 aa29.64■■■□□ 2.33
RHBDD3-203ENST00000413137 AP3B2Q13367 1082 aa29.64■■■□□ 2.33
RHBDD3-203ENST00000413137 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.64■■■□□ 2.33
RHBDD3-203ENST00000413137 TBCKQ8TEA7 893 aa29.64■■■□□ 2.33
RHBDD3-203ENST00000413137 MMP19Q99542 508 aa29.64■■■□□ 2.33
RHBDD3-203ENST00000413137 FTOQ9C0B1 505 aaKnown RBP eCLIP29.64■■■□□ 2.33
RHBDD3-203ENST00000413137 SPDYE3A6NKU9 549 aa29.63■■■□□ 2.33
RHBDD3-203ENST00000413137 ATP2B1P20020 1258 aa29.63■■■□□ 2.33
RHBDD3-203ENST00000413137 CTGFP29279 349 aa29.63■■■□□ 2.33
RHBDD3-203ENST00000413137 DNM1Q05193 864 aaKnown RBP29.63■■■□□ 2.33
RHBDD3-203ENST00000413137 NONOQ15233 471 aaKnown RBP eCLIP29.63■■■□□ 2.33
RHBDD3-203ENST00000413137 GPR142Q7Z601 462 aa29.63■■■□□ 2.33
RHBDD3-203ENST00000413137 MAP3K20Q9NYL2 800 aaKnown RBP29.63■■■□□ 2.33
RHBDD3-203ENST00000413137 UBXN2AP68543 259 aa29.62■■■□□ 2.33
RHBDD3-203ENST00000413137 CCAR1Q8IX12 1150 aaKnown RBP29.62■■■□□ 2.33
RHBDD3-203ENST00000413137 SAMD3Q8N6K7 520 aa29.62■■■□□ 2.33
RHBDD3-203ENST00000413137 CFHR5Q9BXR6 569 aa29.62■■■□□ 2.33
RHBDD3-203ENST00000413137 ASTN1O14525 1302 aa29.62■■■□□ 2.33
RHBDD3-203ENST00000413137 FOSP01100 380 aaPredicted RBP29.61■■■□□ 2.33
RHBDD3-203ENST00000413137 FCER1AP12319 257 aa29.61■■■□□ 2.33
RHBDD3-203ENST00000413137 TEX2Q8IWB9 1127 aa29.61■■■□□ 2.33
RHBDD3-203ENST00000413137 TFIP11Q9UBB9 837 aaKnown RBP29.61■■■□□ 2.33
RHBDD3-203ENST00000413137 DDX49Q9Y6V7 483 aaKnown RBP29.61■■■□□ 2.33
RHBDD3-203ENST00000413137 MAPK4P31152 587 aa29.6■■■□□ 2.33
RHBDD3-203ENST00000413137 KCTD2Q14681 263 aa29.6■■■□□ 2.33
RHBDD3-203ENST00000413137 CRYGNQ8WXF5 182 aa29.6■■■□□ 2.33
RHBDD3-203ENST00000413137 PFASO15067 1338 aa29.6■■■□□ 2.33
RHBDD3-203ENST00000413137 RBBP6Q7Z6E9 1792 aaKnown RBP29.6■■■□□ 2.33
RHBDD3-203ENST00000413137 CAP1Q01518 475 aa29.6■■■□□ 2.33
RHBDD3-203ENST00000413137 ARHGAP39Q9C0H5 1083 aa29.6■■■□□ 2.33
RHBDD3-203ENST00000413137 PCDHB6Q9Y5E3 794 aa29.6■■■□□ 2.33
RHBDD3-203ENST00000413137 DNAJC25-GNG10A0A024R161 153 aa29.59■■■□□ 2.33
RHBDD3-203ENST00000413137 SREBF1P36956 1147 aa29.59■■■□□ 2.33
RHBDD3-203ENST00000413137 PLEKHH3Q7Z736 793 aa29.59■■■□□ 2.33
RHBDD3-203ENST00000413137 FAM133AQ8N9E0 248 aa29.59■■■□□ 2.33
RHBDD3-203ENST00000413137 IL31RAQ8NI17 732 aa29.59■■■□□ 2.33
RHBDD3-203ENST00000413137 ZFP91Q96JP5 570 aaPredicted RBP29.59■■■□□ 2.33
RHBDD3-203ENST00000413137 USP28Q96RU2 1077 aa29.59■■■□□ 2.33
RHBDD3-203ENST00000413137 RMDN3Q96TC7 470 aa29.59■■■□□ 2.33
RHBDD3-203ENST00000413137 RPTORQ8N122 1335 aa29.59■■■□□ 2.33
RHBDD3-203ENST00000413137 SOWAHBA6NEL2 793 aa29.58■■■□□ 2.33
RHBDD3-203ENST00000413137 EIF2AK2P19525 551 aaKnown RBP29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms