RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-233	ENST00000412685	TRIM14	Q14142	442 aa		18.48	■□□□□ 0.55
HCG18-233	ENST00000412685	UBE2S	Q16763	222 aa		18.48	■□□□□ 0.55
HCG18-233	ENST00000412685	MRI	Q9BWK5	157 aa		18.48	■□□□□ 0.55
HCG18-233	ENST00000412685	ADGRG1	Q9Y653	693 aa		18.48	■□□□□ 0.55
HCG18-233	ENST00000412685	MYH4	Q9Y623	1939 aa		18.48	■□□□□ 0.55
HCG18-233	ENST00000412685	USP17L10	C9JJH3	530 aa		18.47	■□□□□ 0.55
HCG18-233	ENST00000412685	ZBTB5	O15062	677 aa		18.47	■□□□□ 0.55
HCG18-233	ENST00000412685	TMEM266	Q2M3C6	531 aa		18.47	■□□□□ 0.55
HCG18-233	ENST00000412685	CUL5	Q93034	780 aa		18.47	■□□□□ 0.55
HCG18-233	ENST00000412685	SRRT	Q9BXP5	876 aa	Known RBP	18.47	■□□□□ 0.55
HCG18-233	ENST00000412685	DHX36	Q9H2U1	1008 aa	Known RBP	18.47	■□□□□ 0.55
HCG18-233	ENST00000412685	GRB10	Q13322	594 aa		18.47	■□□□□ 0.55
HCG18-233	ENST00000412685	DACT2	Q5SW24	774 aa		18.47	■□□□□ 0.55
HCG18-233	ENST00000412685	MTMR8	Q96EF0	704 aa		18.47	■□□□□ 0.55
HCG18-233	ENST00000412685	PRDM4	Q9UKN5	801 aa		18.47	■□□□□ 0.55
HCG18-233	ENST00000412685	FAM196B	A6NMK8	535 aa		18.46	■□□□□ 0.55
HCG18-233	ENST00000412685	LGALS16	A8MUM7	142 aa		18.46	■□□□□ 0.55
HCG18-233	ENST00000412685	CASQ1	P31415	396 aa		18.46	■□□□□ 0.55
HCG18-233	ENST00000412685	CLK2	P49760	499 aa	Known RBP	18.46	■□□□□ 0.55
HCG18-233	ENST00000412685	RBM5	P52756	815 aa	Known RBP eCLIP	18.46	■□□□□ 0.55
HCG18-233	ENST00000412685	FKBP1A	P62942	108 aa	Known RBP	18.46	■□□□□ 0.55
HCG18-233	ENST00000412685	STK4	Q13043	487 aa		18.46	■□□□□ 0.55
HCG18-233	ENST00000412685	NUP88	Q99567	741 aa	Predicted RBP	18.46	■□□□□ 0.55
HCG18-233	ENST00000412685	RAB34	Q9BZG1	259 aa		18.46	■□□□□ 0.55
HCG18-233	ENST00000412685	ABHD10	Q9NUJ1	306 aa		18.46	■□□□□ 0.55
HCG18-233	ENST00000412685	DDTL	A6NHG4	134 aa	Predicted RBP	18.46	■□□□□ 0.55
HCG18-233	ENST00000412685		H0YIN7	160 aa		18.46	■□□□□ 0.55
HCG18-233	ENST00000412685	RNF225	M0QZC1	329 aa	Predicted RBP	18.46	■□□□□ 0.55
HCG18-233	ENST00000412685	ECE2	O60344	883 aa		18.46	■□□□□ 0.55
HCG18-233	ENST00000412685	MRPL12	P52815	198 aa	Known RBP	18.46	■□□□□ 0.55
HCG18-233	ENST00000412685	HDLBP	Q00341	1268 aa	Known RBP	18.46	■□□□□ 0.55
HCG18-233	ENST00000412685	PPP4R3A	Q6IN85	833 aa		18.46	■□□□□ 0.55
HCG18-233	ENST00000412685	ZNF397	Q8NF99	534 aa	Predicted RBP	18.46	■□□□□ 0.55
HCG18-233	ENST00000412685	NOC3L	Q8WTT2	800 aa	Known RBP	18.46	■□□□□ 0.55
HCG18-233	ENST00000412685	DUSP9	Q99956	384 aa	Known RBP	18.46	■□□□□ 0.55
HCG18-233	ENST00000412685	GTPBP4	Q9BZE4	634 aa	Known RBP	18.46	■□□□□ 0.55
HCG18-233	ENST00000412685	STK17A	Q9UEE5	414 aa		18.46	■□□□□ 0.55
HCG18-233	ENST00000412685	FAM198A	Q9UFP1	575 aa		18.46	■□□□□ 0.55
HCG18-233	ENST00000412685	PDIA5	Q14554	519 aa		18.45	■□□□□ 0.54
HCG18-233	ENST00000412685	ERCC6L	Q2NKX8	1250 aa		18.45	■□□□□ 0.54
HCG18-233	ENST00000412685	STYK1	Q6J9G0	422 aa		18.45	■□□□□ 0.54
HCG18-233	ENST00000412685	SV2B	Q7L1I2	683 aa		18.45	■□□□□ 0.54
HCG18-233	ENST00000412685	CSGALNACT2	Q8N6G5	542 aa		18.45	■□□□□ 0.54
HCG18-233	ENST00000412685	P2RX5	Q93086	422 aa		18.45	■□□□□ 0.54
HCG18-233	ENST00000412685	IDI2	Q9BXS1	227 aa		18.45	■□□□□ 0.54
HCG18-233	ENST00000412685	BLOC1S4	Q9NUP1	217 aa		18.45	■□□□□ 0.54
HCG18-233	ENST00000412685	MAGEC2	Q9UBF1	373 aa	Predicted RBP	18.45	■□□□□ 0.54
HCG18-233	ENST00000412685	PI4KB	Q9UBF8	816 aa		18.45	■□□□□ 0.54
HCG18-233	ENST00000412685	SCN9A	Q15858	1988 aa		18.45	■□□□□ 0.54
HCG18-233	ENST00000412685	POTEM	A6NI47	508 aa		18.45	■□□□□ 0.54
HCG18-233	ENST00000412685	FCER1A	P12319	257 aa		18.45	■□□□□ 0.54
HCG18-233	ENST00000412685	CCNE1	P24864	410 aa		18.45	■□□□□ 0.54
HCG18-233	ENST00000412685	SHROOM1	Q2M3G4	852 aa	Predicted RBP	18.45	■□□□□ 0.54
HCG18-233	ENST00000412685	CERKL	Q49MI3	558 aa	Predicted RBP	18.45	■□□□□ 0.54
HCG18-233	ENST00000412685	TMTC1	Q8IUR5	882 aa		18.45	■□□□□ 0.54
HCG18-233	ENST00000412685	MB21D1	Q8N884	522 aa		18.45	■□□□□ 0.54
HCG18-233	ENST00000412685	CDK5RAP3	Q96JB5	506 aa		18.45	■□□□□ 0.54
HCG18-233	ENST00000412685	PNMA5	Q96PV4	448 aa		18.45	■□□□□ 0.54
HCG18-233	ENST00000412685	PSTPIP2	Q9H939	334 aa		18.45	■□□□□ 0.54
HCG18-233	ENST00000412685	SIPA1L1	O43166	1804 aa		18.45	■□□□□ 0.54
HCG18-233	ENST00000412685	BICDL2	A1A5D9	508 aa		18.44	■□□□□ 0.54
HCG18-233	ENST00000412685	EEF2	P13639	858 aa	Known RBP	18.44	■□□□□ 0.54
HCG18-233	ENST00000412685	PPP1R2	P41236	205 aa		18.44	■□□□□ 0.54
HCG18-233	ENST00000412685	CNNM4	Q6P4Q7	775 aa		18.44	■□□□□ 0.54
HCG18-233	ENST00000412685	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	18.44	■□□□□ 0.54
HCG18-233	ENST00000412685	KIFC2	Q96AC6	838 aa		18.44	■□□□□ 0.54
HCG18-233	ENST00000412685	ZNF219	Q9P2Y4	722 aa	Predicted RBP	18.44	■□□□□ 0.54
HCG18-233	ENST00000412685	RAD21	O60216	631 aa		18.44	■□□□□ 0.54
HCG18-233	ENST00000412685	KRT9	P35527	623 aa		18.44	■□□□□ 0.54
HCG18-233	ENST00000412685	SH3BP5L	Q7L8J4	393 aa		18.44	■□□□□ 0.54
HCG18-233	ENST00000412685	ZNF507	Q8TCN5	953 aa		18.44	■□□□□ 0.54
HCG18-233	ENST00000412685	MKL1	Q969V6	931 aa		18.44	■□□□□ 0.54
HCG18-233	ENST00000412685	KANSL2	Q9H9L4	492 aa		18.44	■□□□□ 0.54
HCG18-233	ENST00000412685	LZTFL1	Q9NQ48	299 aa		18.44	■□□□□ 0.54
HCG18-233	ENST00000412685		A0A1W2PQC6	194 aa		18.43	■□□□□ 0.54
HCG18-233	ENST00000412685	PES1	O00541	588 aa	Known RBP	18.43	■□□□□ 0.54
HCG18-233	ENST00000412685	ERVK-24	P63145	666 aa		18.43	■□□□□ 0.54
HCG18-233	ENST00000412685	MCM6	Q14566	821 aa		18.43	■□□□□ 0.54
HCG18-233	ENST00000412685	ANKRD40	Q6AI12	368 aa		18.43	■□□□□ 0.54
HCG18-233	ENST00000412685	MNS1	Q8NEH6	495 aa		18.43	■□□□□ 0.54
HCG18-233	ENST00000412685	SNX29	Q8TEQ0	813 aa		18.43	■□□□□ 0.54
HCG18-233	ENST00000412685	LARP4B	Q92615	738 aa	Known RBP	18.43	■□□□□ 0.54
HCG18-233	ENST00000412685	NYAP2	Q9P242	653 aa		18.43	■□□□□ 0.54
HCG18-233	ENST00000412685	DDX25	Q9UHL0	483 aa	Known RBP	18.43	■□□□□ 0.54
HCG18-233	ENST00000412685	SLX4	Q8IY92	1834 aa		18.43	■□□□□ 0.54
HCG18-233	ENST00000412685	MYMK	A6NI61	221 aa		18.43	■□□□□ 0.54
HCG18-233	ENST00000412685	SLC1A4	P43007	532 aa		18.43	■□□□□ 0.54
HCG18-233	ENST00000412685	COBLL1	Q53SF7	1204 aa		18.43	■□□□□ 0.54
HCG18-233	ENST00000412685	KRT79	Q5XKE5	535 aa		18.43	■□□□□ 0.54
HCG18-233	ENST00000412685	FBXO38	Q6PIJ6	1188 aa		18.43	■□□□□ 0.54
HCG18-233	ENST00000412685	CYP26C1	Q6V0L0	522 aa		18.43	■□□□□ 0.54
HCG18-233	ENST00000412685	KIAA0895	Q8NCT3	520 aa		18.43	■□□□□ 0.54
HCG18-233	ENST00000412685	FEZ1	Q99689	392 aa		18.43	■□□□□ 0.54
HCG18-233	ENST00000412685	TRIM34	Q9BYJ4	488 aa		18.43	■□□□□ 0.54
HCG18-233	ENST00000412685	IRX2	Q9BZI1	471 aa	Predicted RBP	18.43	■□□□□ 0.54
HCG18-233	ENST00000412685	SERPINA10	Q9UK55	444 aa		18.43	■□□□□ 0.54
HCG18-233	ENST00000412685	MAP3K9	P80192	1104 aa		18.42	■□□□□ 0.54
HCG18-233	ENST00000412685	DCAF4	Q8WV16	495 aa		18.42	■□□□□ 0.54
HCG18-233	ENST00000412685	HPS3	Q969F9	1004 aa		18.42	■□□□□ 0.54
HCG18-233	ENST00000412685	EEF2KMT	Q96G04	330 aa		18.42	■□□□□ 0.54

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