RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 PES1O00541 588 aaKnown RBP12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 CLCN6P51797 869 aa12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 PDIA5Q14554 519 aa12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 COBLL1Q53SF7 1204 aa12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 GPATCH4Q5T3I0 446 aaKnown RBP12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 DUSP9Q99956 384 aaKnown RBP12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 FAM53CQ9NYF3 392 aa12.86□□□□□ -0.35
TRAFD1-202ENST00000412615 STK4Q13043 487 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 ZNF569Q5MCW4 686 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 GPR161Q8N6U8 529 aaKnown RBP12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 TEKT1Q969V4 418 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 CDK5RAP3Q96JB5 506 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 TUBGCP2Q9BSJ2 902 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 JMJD4Q9H9V9 463 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 RIC8AQ9NPQ8 531 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 PRDM10Q9NQV6 1147 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 MYO1AQ9UBC5 1043 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 CAPN11Q9UMQ6 739 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 C10orf71Q711Q0 1435 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 FOCADQ5VW36 1801 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 TTC26A0AVF1 554 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 ZSCAN20P17040 1043 aaPredicted RBP12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 SHMT1P34896 483 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 DOK7Q18PE1 504 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 ADGRF4Q8IZF3 695 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 ACRBPQ8NEB7 543 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 CCDC17Q96LX7 622 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 NUP58Q9BVL2 599 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 ZNF446Q9NWS9 450 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 PVALEFA0A1B0GWK0 134 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 PDE6BP35913 854 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 SCNN1DP51172 638 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 MRPL12P52815 198 aaKnown RBP12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 GRB10Q13322 594 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 ANKRD40Q6AI12 368 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 PPP4R3AQ6IN85 833 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 CDC42EP5Q6NZY7 148 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 TMCO3Q6UWJ1 677 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 PROM2Q8N271 834 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 RETREG2Q8NC44 543 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 LRRC27Q9C0I9 530 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 ZMYND15Q9H091 742 aa12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 EPN1Q9Y6I3 576 aaPredicted RBP12.85□□□□□ -0.35
TRAFD1-202ENST00000412615 A0A0U1RQJ8 604 aa12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 CTAGE9A4FU28 777 aa12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 TDP2O95551 362 aa12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 HOXA7P31268 230 aaPredicted RBP12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 KRT79Q5XKE5 535 aa12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 RSRC2Q7L4I2 434 aaKnown RBP12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 CLEC10AQ8IUN9 316 aa12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 ATRIPQ8WXE1 791 aa12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 RABGGTAQ92696 567 aa12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 GOLGA1Q92805 767 aa12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 DNAJC7Q99615 494 aa12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 CDC23Q9UJX2 597 aa12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 MPHOSPH10O00566 681 aaKnown RBP12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 SLC37A4O43826 429 aa12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 FCER1AP12319 257 aa12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 TNNI2P48788 182 aa12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 TBC1D8BQ0IIM8 1120 aa12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 KIF4BQ2VIQ3 1234 aa12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 APOBEC3HQ6NTF7 200 aaKnown RBP12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 UNC13DQ70J99 1090 aa12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 LARP4BQ92615 738 aaKnown RBP12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 CUL5Q93034 780 aa12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 MXD3Q9BW11 206 aa12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 EHD4Q9H223 541 aa12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 BLOC1S4Q9NUP1 217 aa12.84□□□□□ -0.35
TRAFD1-202ENST00000412615 B4DLN1 442 aa12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 ZBTB5O15062 677 aa12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 NDUFA10O95299 355 aa12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 MTIF2P46199 727 aaKnown RBP12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 ATP2B2Q01814 1243 aa12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 CCDC96Q2M329 555 aa12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 TEX35Q5T0J7 233 aa12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 CEP112Q8N8E3 955 aa12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 CNOT6LQ96LI5 555 aaKnown RBP12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 PNMA5Q96PV4 448 aa12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 CHP1Q99653 195 aa12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 SLF1Q9BQI6 1058 aa12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 EDIL3O43854 480 aa12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 HSPA1LP34931 641 aa12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 CLK2P49760 499 aaKnown RBP12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 TUBB4BP68371 445 aa12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 DMTNQ08495 405 aa12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 MCM6Q14566 821 aa12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 TTBK2Q6IQ55 1244 aa12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 PODNQ7Z5L7 613 aa12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 SRGAP1Q7Z6B7 1085 aa12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 KIAA0895Q8NCT3 520 aa12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 MASTLQ96GX5 879 aa12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 NAP1L4Q99733 375 aaKnown RBP12.83□□□□□ -0.36
TRAFD1-202ENST00000412615 QSER1Q2KHR3 1735 aa12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 MYMKA6NI61 221 aa12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 GCFC2P16383 781 aaKnown RBP12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 TRIM21P19474 475 aaKnown RBP12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 ARHGAP25P42331 645 aa12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 CRKP46108 304 aa12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 UTP14CQ5TAP6 766 aaKnown RBP12.82□□□□□ -0.36
TRAFD1-202ENST00000412615 CENPPQ6IPU0 288 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms