RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 PFKMP08237 780 aa7.79□□□□□ -1.16
LINC00396-201ENST00000411690 SH3BP2P78314 561 aa7.79□□□□□ -1.16
LINC00396-201ENST00000411690 KCNMA1Q12791 1236 aa7.79□□□□□ -1.16
LINC00396-201ENST00000411690 CCDC27Q2M243 656 aa7.79□□□□□ -1.16
LINC00396-201ENST00000411690 ZNF792Q3KQV3 632 aa7.79□□□□□ -1.16
LINC00396-201ENST00000411690 TBC1D9Q6ZT07 1266 aa7.79□□□□□ -1.16
LINC00396-201ENST00000411690 WWC1Q8IX03 1113 aa7.79□□□□□ -1.16
LINC00396-201ENST00000411690 PHOSPHO2Q8TCD6 241 aa7.79□□□□□ -1.16
LINC00396-201ENST00000411690 SCLYQ96I15 445 aa7.79□□□□□ -1.16
LINC00396-201ENST00000411690 SLC9A7Q96T83 725 aa7.79□□□□□ -1.16
LINC00396-201ENST00000411690 NOC4LQ9BVI4 516 aaKnown RBP7.79□□□□□ -1.16
LINC00396-201ENST00000411690 WNT8AQ9H1J5 351 aa7.79□□□□□ -1.16
LINC00396-201ENST00000411690 CABP5Q9NP86 173 aa7.79□□□□□ -1.16
LINC00396-201ENST00000411690 AATFQ9NY61 560 aaKnown RBP eCLIP7.79□□□□□ -1.16
LINC00396-201ENST00000411690 SAP30BPQ9UHR5 308 aaKnown RBP7.79□□□□□ -1.16
LINC00396-201ENST00000411690 ZHX1Q9UKY1 873 aaPredicted RBP7.79□□□□□ -1.16
LINC00396-201ENST00000411690 CHD7Q9P2D1 2997 aa7.79□□□□□ -1.16
LINC00396-201ENST00000411690 FANCIQ9NVI1 1328 aa7.78□□□□□ -1.16
LINC00396-201ENST00000411690 HOXA2O43364 376 aa7.78□□□□□ -1.16
LINC00396-201ENST00000411690 ACTN1P12814 892 aa7.78□□□□□ -1.16
LINC00396-201ENST00000411690 IL15P40933 162 aaPredicted RBP7.78□□□□□ -1.16
LINC00396-201ENST00000411690 GJA9P57773 515 aa7.78□□□□□ -1.16
LINC00396-201ENST00000411690 TIMM10P62072 90 aa7.78□□□□□ -1.16
LINC00396-201ENST00000411690 EXOSC9Q06265 439 aaKnown RBP7.78□□□□□ -1.16
LINC00396-201ENST00000411690 TCF15Q12870 199 aa7.78□□□□□ -1.16
LINC00396-201ENST00000411690 PKN1Q16512 942 aa7.78□□□□□ -1.16
LINC00396-201ENST00000411690 ABCB5Q2M3G0 1257 aa7.78□□□□□ -1.16
LINC00396-201ENST00000411690 CERKLQ49MI3 558 aaPredicted RBP7.78□□□□□ -1.16
LINC00396-201ENST00000411690 TATDN1Q6P1N9 297 aa7.78□□□□□ -1.16
LINC00396-201ENST00000411690 DEFB128Q7Z7B8 93 aa7.78□□□□□ -1.16
LINC00396-201ENST00000411690 MSL3Q8N5Y2 521 aaKnown RBP7.78□□□□□ -1.16
LINC00396-201ENST00000411690 VWCEQ96DN2 955 aa7.78□□□□□ -1.16
LINC00396-201ENST00000411690 PURBQ96QR8 312 aaKnown RBP7.78□□□□□ -1.16
LINC00396-201ENST00000411690 FAM86C1Q9NVL1 165 aa7.78□□□□□ -1.16
LINC00396-201ENST00000411690 LRP2BPQ9P2M1 347 aa7.78□□□□□ -1.16
LINC00396-201ENST00000411690 PRKAG3Q9UGI9 489 aa7.78□□□□□ -1.16
LINC00396-201ENST00000411690 FAM50BQ9Y247 325 aa7.78□□□□□ -1.16
LINC00396-201ENST00000411690 IL16Q14005 1332 aa7.78□□□□□ -1.16
LINC00396-201ENST00000411690 FLOT1O75955 427 aa7.77□□□□□ -1.17
LINC00396-201ENST00000411690 SNAI1O95863 264 aaPredicted RBP7.77□□□□□ -1.17
LINC00396-201ENST00000411690 ZP2Q05996 745 aa7.77□□□□□ -1.17
LINC00396-201ENST00000411690 ITGA7Q13683 1181 aa7.77□□□□□ -1.17
LINC00396-201ENST00000411690 MVPQ14764 893 aaKnown RBP7.77□□□□□ -1.17
LINC00396-201ENST00000411690 MRPL14Q6P1L8 145 aaKnown RBP7.77□□□□□ -1.17
LINC00396-201ENST00000411690 BMP8AQ7Z5Y6 402 aa7.77□□□□□ -1.17
LINC00396-201ENST00000411690 SPRED2Q7Z698 418 aa7.77□□□□□ -1.17
LINC00396-201ENST00000411690 HERC6Q8IVU3 1022 aa7.77□□□□□ -1.17
LINC00396-201ENST00000411690 SPATA5Q8NB90 893 aa7.77□□□□□ -1.17
LINC00396-201ENST00000411690 SLC43A3Q8NBI5 491 aa7.77□□□□□ -1.17
LINC00396-201ENST00000411690 GDPD5Q8WTR4 605 aa7.77□□□□□ -1.17
LINC00396-201ENST00000411690 ATG4CQ96DT6 458 aa7.77□□□□□ -1.17
LINC00396-201ENST00000411690 XAGE2Q96GT9 111 aa7.77□□□□□ -1.17
LINC00396-201ENST00000411690 AGBL1Q96MI9 1066 aa7.77□□□□□ -1.17
LINC00396-201ENST00000411690 IRF2BPLQ9H1B7 796 aa7.77□□□□□ -1.17
LINC00396-201ENST00000411690 TRPV6Q9H1D0 765 aa7.77□□□□□ -1.17
LINC00396-201ENST00000411690 UPF3AQ9H1J1 476 aaKnown RBP7.77□□□□□ -1.17
LINC00396-201ENST00000411690 HMG20BQ9P0W2 317 aa7.77□□□□□ -1.17
LINC00396-201ENST00000411690 ZNF318Q5VUA4 2279 aa7.77□□□□□ -1.17
LINC00396-201ENST00000411690 ZNFX1Q9P2E3 1918 aaKnown RBP7.76□□□□□ -1.17
LINC00396-201ENST00000411690 H3BQ06 376 aaPredicted RBP7.76□□□□□ -1.17
LINC00396-201ENST00000411690 ADCY6O43306 1168 aa7.76□□□□□ -1.17
LINC00396-201ENST00000411690 B4GALT4O60513 344 aa7.76□□□□□ -1.17
LINC00396-201ENST00000411690 CABYRO75952 493 aa7.76□□□□□ -1.17
LINC00396-201ENST00000411690 KRT37O76014 449 aa7.76□□□□□ -1.17
LINC00396-201ENST00000411690 IRS1P35568 1242 aa7.76□□□□□ -1.17
LINC00396-201ENST00000411690 ID4P47928 161 aa7.76□□□□□ -1.17
LINC00396-201ENST00000411690 BEX3Q00994 111 aa7.76□□□□□ -1.17
LINC00396-201ENST00000411690 ACVR2BQ13705 512 aa7.76□□□□□ -1.17
LINC00396-201ENST00000411690 TMEM132BQ14DG7 1078 aa7.76□□□□□ -1.17
LINC00396-201ENST00000411690 NAA16Q6N069 864 aaPredicted RBP7.76□□□□□ -1.17
LINC00396-201ENST00000411690 CXCL17Q6UXB2 119 aa7.76□□□□□ -1.17
LINC00396-201ENST00000411690 PI16Q6UXB8 463 aa7.76□□□□□ -1.17
LINC00396-201ENST00000411690 RIOX2Q8IUF8 465 aa7.76□□□□□ -1.17
LINC00396-201ENST00000411690 ADHFE1Q8IWW8 467 aa7.76□□□□□ -1.17
LINC00396-201ENST00000411690 SUGP1Q8IWZ8 645 aaKnown RBP7.76□□□□□ -1.17
LINC00396-201ENST00000411690 NEK9Q8TD19 979 aa7.76□□□□□ -1.17
LINC00396-201ENST00000411690 ATOH1Q92858 354 aaPredicted RBP7.76□□□□□ -1.17
LINC00396-201ENST00000411690 PBXIP1Q96AQ6 731 aa7.76□□□□□ -1.17
LINC00396-201ENST00000411690 SEZ6LQ9BYH1 1024 aa7.76□□□□□ -1.17
LINC00396-201ENST00000411690 USP44Q9H0E7 712 aa7.76□□□□□ -1.17
LINC00396-201ENST00000411690 SUGCTQ9HAC7 445 aa7.76□□□□□ -1.17
LINC00396-201ENST00000411690 MUTYHQ9UIF7 546 aa7.76□□□□□ -1.17
LINC00396-201ENST00000411690 SERPINB13Q9UIV8 391 aa7.76□□□□□ -1.17
LINC00396-201ENST00000411690 A0A1B0GUL7 405 aa7.75□□□□□ -1.17
LINC00396-201ENST00000411690 CTAGE5O15320 804 aa7.75□□□□□ -1.17
LINC00396-201ENST00000411690 STAT3P40763 770 aa7.75□□□□□ -1.17
LINC00396-201ENST00000411690 SEPT2Q15019 361 aa7.75□□□□□ -1.17
LINC00396-201ENST00000411690 CCDC144BQ3MJ40 725 aa7.75□□□□□ -1.17
LINC00396-201ENST00000411690 HERC4Q5GLZ8 1057 aaPredicted RBP7.75□□□□□ -1.17
LINC00396-201ENST00000411690 MAMDC4Q6UXC1 1216 aa7.75□□□□□ -1.17
LINC00396-201ENST00000411690 EP400NLQ6ZTU2 488 aa7.75□□□□□ -1.17
LINC00396-201ENST00000411690 EDAQ92838 391 aa7.75□□□□□ -1.17
LINC00396-201ENST00000411690 DDX11Q96FC9 970 aa7.75□□□□□ -1.17
LINC00396-201ENST00000411690 NEUROD6Q96NK8 337 aa7.75□□□□□ -1.17
LINC00396-201ENST00000411690 MTUS1Q9ULD2 1270 aa7.75□□□□□ -1.17
LINC00396-201ENST00000411690 AKAP2Q9Y2D5 859 aa7.75□□□□□ -1.17
LINC00396-201ENST00000411690 COL4A4P53420 1690 aaPredicted RBP7.75□□□□□ -1.17
LINC00396-201ENST00000411690 GRIN2DO15399 1336 aa7.75□□□□□ -1.17
LINC00396-201ENST00000411690 CDK5RAP2Q96SN8 1893 aa7.75□□□□□ -1.17
LINC00396-201ENST00000411690 ZDBF2Q9HCK1 2354 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms