RNA–Protein interactions for RNA: ENST00000411642.6

TTC39A-207, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best)

Gene TTC39A, Length 931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-207ENST00000411642 PFKFB2O60825 505 aa11.62□□□□□ -0.55
TTC39A-207ENST00000411642 PPFIA3O75145 1194 aa11.62□□□□□ -0.55
TTC39A-207ENST00000411642 LARGE1O95461 756 aa11.62□□□□□ -0.55
TTC39A-207ENST00000411642 CFBP00751 764 aa11.62□□□□□ -0.55
TTC39A-207ENST00000411642 IGHA2P01877 340 aa11.62□□□□□ -0.55
TTC39A-207ENST00000411642 CCL5P13501 91 aa11.62□□□□□ -0.55
TTC39A-207ENST00000411642 IFNAR1P17181 557 aa11.62□□□□□ -0.55
TTC39A-207ENST00000411642 CACNB2Q08289 660 aaPredicted RBP11.62□□□□□ -0.55
TTC39A-207ENST00000411642 SCRN1Q12765 414 aa11.62□□□□□ -0.55
TTC39A-207ENST00000411642 NTRK3Q16288 839 aa11.62□□□□□ -0.55
TTC39A-207ENST00000411642 MAP3K21Q5TCX8 1036 aa11.62□□□□□ -0.55
TTC39A-207ENST00000411642 CPLX2Q6PUV4 134 aaKnown RBP11.62□□□□□ -0.55
TTC39A-207ENST00000411642 ZNF467Q7Z7K2 595 aaPredicted RBP11.62□□□□□ -0.55
TTC39A-207ENST00000411642 TBC1D5Q92609 795 aa11.62□□□□□ -0.55
TTC39A-207ENST00000411642 GPKOWQ92917 476 aaPredicted RBP eCLIP11.62□□□□□ -0.55
TTC39A-207ENST00000411642 PHKBQ93100 1093 aa11.62□□□□□ -0.55
TTC39A-207ENST00000411642 PURBQ96QR8 312 aaKnown RBP11.62□□□□□ -0.55
TTC39A-207ENST00000411642 TINF2Q9BSI4 451 aa11.62□□□□□ -0.55
TTC39A-207ENST00000411642 SLC26A6Q9BXS9 759 aa11.62□□□□□ -0.55
TTC39A-207ENST00000411642 UNC93B1Q9H1C4 597 aa11.62□□□□□ -0.55
TTC39A-207ENST00000411642 ASTN1O14525 1302 aa11.61□□□□□ -0.55
TTC39A-207ENST00000411642 MYH7BA7E2Y1 1941 aa11.61□□□□□ -0.55
TTC39A-207ENST00000411642 AKAP17AQ02040 695 aaKnown RBP11.61□□□□□ -0.55
TTC39A-207ENST00000411642 ME3Q16798 604 aa11.61□□□□□ -0.55
TTC39A-207ENST00000411642 WWC2Q6AWC2 1192 aa11.61□□□□□ -0.55
TTC39A-207ENST00000411642 MSL3Q8N5Y2 521 aaKnown RBP11.61□□□□□ -0.55
TTC39A-207ENST00000411642 RNF26Q9BY78 433 aaPredicted RBP11.61□□□□□ -0.55
TTC39A-207ENST00000411642 MAF1Q9H063 256 aa11.61□□□□□ -0.55
TTC39A-207ENST00000411642 RNF208Q9H0X6 261 aa11.61□□□□□ -0.55
TTC39A-207ENST00000411642 HMX1Q9NP08 348 aaPredicted RBP11.61□□□□□ -0.55
TTC39A-207ENST00000411642 RBM27Q9P2N5 1060 aaKnown RBP11.61□□□□□ -0.55
TTC39A-207ENST00000411642 ADD3Q9UEY8 706 aaKnown RBP11.61□□□□□ -0.55
TTC39A-207ENST00000411642 RPTORQ8N122 1335 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 SYNGAP1Q96PV0 1343 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 ASB14A6NK59 587 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 GCOM1H8Y6P7 765 aaPredicted RBP11.6□□□□□ -0.55
TTC39A-207ENST00000411642 hCG_1984214I3L0E3 225 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 PRPF3O43395 683 aaKnown RBP11.6□□□□□ -0.55
TTC39A-207ENST00000411642 ST18O60284 1047 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 CDKL5O76039 1030 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 POLR2MP0CAP2 368 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 CYBAP13498 195 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 SCG2P13521 617 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 CCND3P30281 292 aaPredicted RBP11.6□□□□□ -0.55
TTC39A-207ENST00000411642 HOXA13P31271 388 aaPredicted RBP11.6□□□□□ -0.55
TTC39A-207ENST00000411642 ALDH5A1P51649 535 aaPredicted RBP11.6□□□□□ -0.55
TTC39A-207ENST00000411642 HSD17B4P51659 736 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 NAPAP54920 295 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 GHRHRQ02643 423 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 PFKFB3Q16875 520 aaPredicted RBP11.6□□□□□ -0.55
TTC39A-207ENST00000411642 MAMDC4Q6UXC1 1216 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 ARMCX2Q7L311 632 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 TRIM22Q8IYM9 498 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 SAMD3Q8N6K7 520 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 ZNF713Q8N859 430 aaPredicted RBP11.6□□□□□ -0.55
TTC39A-207ENST00000411642 NECAB1Q8N987 351 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 DNERQ8NFT8 737 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 SYTL5Q8TDW5 730 aaPredicted RBP11.6□□□□□ -0.55
TTC39A-207ENST00000411642 GTF3C6Q969F1 213 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 TMEM106CQ9BVX2 250 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.6□□□□□ -0.55
TTC39A-207ENST00000411642 COL20A1Q9P218 1284 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 LIMCH1Q9UPQ0 1083 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 CNPY2Q9Y2B0 182 aa11.6□□□□□ -0.55
TTC39A-207ENST00000411642 DDX49Q9Y6V7 483 aaKnown RBP11.6□□□□□ -0.55
TTC39A-207ENST00000411642 STXBP3O00186 592 aa11.59□□□□□ -0.55
TTC39A-207ENST00000411642 SNAI1O95863 264 aaPredicted RBP11.59□□□□□ -0.55
TTC39A-207ENST00000411642 CNGA1P29973 690 aa11.59□□□□□ -0.55
TTC39A-207ENST00000411642 SSRP1Q08945 709 aaKnown RBP11.59□□□□□ -0.55
TTC39A-207ENST00000411642 PKN1Q16512 942 aa11.59□□□□□ -0.55
TTC39A-207ENST00000411642 PRAMEF19Q5SWL8 479 aa11.59□□□□□ -0.55
TTC39A-207ENST00000411642 TYW1BQ6NUM6 668 aa11.59□□□□□ -0.55
TTC39A-207ENST00000411642 PPP1R18Q6NYC8 613 aa11.59□□□□□ -0.55
TTC39A-207ENST00000411642 TRPV1Q8NER1 839 aa11.59□□□□□ -0.55
TTC39A-207ENST00000411642 TAAR1Q96RJ0 339 aa11.59□□□□□ -0.55
TTC39A-207ENST00000411642 PAK6Q9NQU5 681 aaPredicted RBP11.59□□□□□ -0.55
TTC39A-207ENST00000411642 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.59□□□□□ -0.55
TTC39A-207ENST00000411642 BARHL2Q9NY43 387 aa11.59□□□□□ -0.55
TTC39A-207ENST00000411642 MAP3K20Q9NYL2 800 aaKnown RBP11.59□□□□□ -0.55
TTC39A-207ENST00000411642 DOCK5Q9H7D0 1870 aa11.59□□□□□ -0.55
TTC39A-207ENST00000411642 LOC102724159A0A0B4J2E5 919 aa11.58□□□□□ -0.56
TTC39A-207ENST00000411642 POTEFA5A3E0 1075 aa11.58□□□□□ -0.56
TTC39A-207ENST00000411642 CAPN15O75808 1086 aa11.58□□□□□ -0.56
TTC39A-207ENST00000411642 CTDNEP1O95476 244 aa11.58□□□□□ -0.56
TTC39A-207ENST00000411642 GJB1P08034 283 aa11.58□□□□□ -0.56
TTC39A-207ENST00000411642 EIF2AK2P19525 551 aaKnown RBP11.58□□□□□ -0.56
TTC39A-207ENST00000411642 SOX10P56693 466 aa11.58□□□□□ -0.56
TTC39A-207ENST00000411642 PWP2Q15269 919 aaKnown RBP11.58□□□□□ -0.56
TTC39A-207ENST00000411642 ARHGEF16Q5VV41 709 aa11.58□□□□□ -0.56
TTC39A-207ENST00000411642 USP17L6PQ6QN14 398 aa11.58□□□□□ -0.56
TTC39A-207ENST00000411642 FCHSD1Q86WN1 690 aa11.58□□□□□ -0.56
TTC39A-207ENST00000411642 IL27Q8NEV9 243 aa11.58□□□□□ -0.56
TTC39A-207ENST00000411642 SMARCC2Q8TAQ2 1214 aa11.58□□□□□ -0.56
TTC39A-207ENST00000411642 NSUN6Q8TEA1 469 aaKnown RBP11.58□□□□□ -0.56
TTC39A-207ENST00000411642 CUL5Q93034 780 aa11.58□□□□□ -0.56
TTC39A-207ENST00000411642 DEFB118Q96PH6 123 aa11.58□□□□□ -0.56
TTC39A-207ENST00000411642 RMDN3Q96TC7 470 aa11.58□□□□□ -0.56
TTC39A-207ENST00000411642 MPHOSPH6Q99547 160 aaKnown RBP11.58□□□□□ -0.56
TTC39A-207ENST00000411642 ABHD16BQ9H3Z7 469 aa11.58□□□□□ -0.56
TTC39A-207ENST00000411642 PSTPIP2Q9H939 334 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms