RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 PLXNB2O15031 1838 aa17.47■□□□□ 0.39
LSM5-207ENST00000410044 SLC15A5A6NIM6 579 aa17.47■□□□□ 0.39
LSM5-207ENST00000410044 SYT1P21579 422 aa17.47■□□□□ 0.39
LSM5-207ENST00000410044 CTGFP29279 349 aa17.47■□□□□ 0.39
LSM5-207ENST00000410044 ADCY7P51828 1080 aa17.47■□□□□ 0.39
LSM5-207ENST00000410044 RPS6P62753 249 aaKnown RBP17.47■□□□□ 0.39
LSM5-207ENST00000410044 BAATQ14032 418 aaPredicted RBP17.47■□□□□ 0.39
LSM5-207ENST00000410044 GRB14Q14449 540 aa17.47■□□□□ 0.39
LSM5-207ENST00000410044 MORN1Q5T089 497 aa17.47■□□□□ 0.39
LSM5-207ENST00000410044 RNF207Q6ZRF8 634 aa17.47■□□□□ 0.39
LSM5-207ENST00000410044 BLIDQ8IZY5 108 aa17.47■□□□□ 0.39
LSM5-207ENST00000410044 USP6NLQ92738 828 aa17.47■□□□□ 0.39
LSM5-207ENST00000410044 MMP19Q99542 508 aa17.47■□□□□ 0.39
LSM5-207ENST00000410044 GJD2Q9UKL4 321 aa17.47■□□□□ 0.39
LSM5-207ENST00000410044 RBBP6Q7Z6E9 1792 aaKnown RBP17.47■□□□□ 0.39
LSM5-207ENST00000410044 ZNF236Q9UL36 1845 aa17.47■□□□□ 0.39
LSM5-207ENST00000410044 CFBP00751 764 aa17.46■□□□□ 0.39
LSM5-207ENST00000410044 FOSP01100 380 aaPredicted RBP17.46■□□□□ 0.39
LSM5-207ENST00000410044 GNRH1P01148 92 aa17.46■□□□□ 0.39
LSM5-207ENST00000410044 DDIT3P35638 169 aa17.46■□□□□ 0.39
LSM5-207ENST00000410044 PSMC4P43686 418 aa17.46■□□□□ 0.39
LSM5-207ENST00000410044 FCGRTP55899 365 aa17.46■□□□□ 0.39
LSM5-207ENST00000410044 KCTD2Q14681 263 aa17.46■□□□□ 0.39
LSM5-207ENST00000410044 KIF22Q14807 665 aa17.46■□□□□ 0.39
LSM5-207ENST00000410044 NSMFQ6X4W1 530 aa17.46■□□□□ 0.39
LSM5-207ENST00000410044 ANKRD35Q8N283 1001 aa17.46■□□□□ 0.39
LSM5-207ENST00000410044 FAM133AQ8N9E0 248 aa17.46■□□□□ 0.39
LSM5-207ENST00000410044 SPRYD3Q8NCJ5 442 aa17.46■□□□□ 0.39
LSM5-207ENST00000410044 SYTL5Q8TDW5 730 aaPredicted RBP17.46■□□□□ 0.39
LSM5-207ENST00000410044 ZNF296Q8WUU4 475 aaPredicted RBP17.46■□□□□ 0.39
LSM5-207ENST00000410044 ERO1AQ96HE7 468 aa17.46■□□□□ 0.39
LSM5-207ENST00000410044 DAXXQ9UER7 740 aaPredicted RBP17.46■□□□□ 0.39
LSM5-207ENST00000410044 IVNS1ABPQ9Y6Y0 642 aa17.46■□□□□ 0.39
LSM5-207ENST00000410044 ADAMTS3O15072 1205 aa17.45■□□□□ 0.38
LSM5-207ENST00000410044 AP3B2Q13367 1082 aa17.45■□□□□ 0.38
LSM5-207ENST00000410044 ARHGEF6Q15052 776 aa17.45■□□□□ 0.38
LSM5-207ENST00000410044 USP17L6PQ6QN14 398 aa17.45■□□□□ 0.38
LSM5-207ENST00000410044 TRIM47Q96LD4 638 aa17.45■□□□□ 0.38
LSM5-207ENST00000410044 DIS3Q9Y2L1 958 aaKnown RBP17.45■□□□□ 0.38
LSM5-207ENST00000410044 LOC102724159A0A0B4J2E5 919 aa17.44■□□□□ 0.38
LSM5-207ENST00000410044 TNPO2O14787 897 aaKnown RBP17.44■□□□□ 0.38
LSM5-207ENST00000410044 HOXC6P09630 235 aa17.44■□□□□ 0.38
LSM5-207ENST00000410044 U2AF2P26368 475 aaKnown RBP eCLIP17.44■□□□□ 0.38
LSM5-207ENST00000410044 KRT2P35908 639 aa17.44■□□□□ 0.38
LSM5-207ENST00000410044 CAP1Q01518 475 aa17.44■□□□□ 0.38
LSM5-207ENST00000410044 PWP2Q15269 919 aaKnown RBP17.44■□□□□ 0.38
LSM5-207ENST00000410044 SAFBQ15424 915 aaKnown RBP eCLIP17.44■□□□□ 0.38
LSM5-207ENST00000410044 ZNF792Q3KQV3 632 aa17.44■□□□□ 0.38
LSM5-207ENST00000410044 WDR78Q5VTH9 848 aa17.44■□□□□ 0.38
LSM5-207ENST00000410044 REXO1Q8N1G1 1221 aaKnown RBP17.44■□□□□ 0.38
LSM5-207ENST00000410044 DNERQ8NFT8 737 aa17.44■□□□□ 0.38
LSM5-207ENST00000410044 TNFRSF25Q93038 417 aa17.44■□□□□ 0.38
LSM5-207ENST00000410044 NUDT12Q9BQG2 462 aa17.44■□□□□ 0.38
LSM5-207ENST00000410044 FOXP1Q9H334 677 aaPredicted RBP17.44■□□□□ 0.38
LSM5-207ENST00000410044 COL20A1Q9P218 1284 aa17.44■□□□□ 0.38
LSM5-207ENST00000410044 PCDHA6Q9UN73 950 aa17.44■□□□□ 0.38
LSM5-207ENST00000410044 PCDHA8Q9Y5H6 950 aa17.44■□□□□ 0.38
LSM5-207ENST00000410044 LCTP09848 1927 aa17.44■□□□□ 0.38
LSM5-207ENST00000410044 BTBD18B2RXH4 712 aa17.43■□□□□ 0.38
LSM5-207ENST00000410044 H3BQV1 296 aa17.43■□□□□ 0.38
LSM5-207ENST00000410044 STX6O43752 255 aa17.43■□□□□ 0.38
LSM5-207ENST00000410044 COBLO75128 1261 aa17.43■□□□□ 0.38
LSM5-207ENST00000410044 HOXD10P28358 340 aa17.43■□□□□ 0.38
LSM5-207ENST00000410044 ADORA2AP29274 412 aa17.43■□□□□ 0.38
LSM5-207ENST00000410044 HOXA13P31271 388 aaPredicted RBP17.43■□□□□ 0.38
LSM5-207ENST00000410044 GUCY1B3Q02153 619 aa17.43■□□□□ 0.38
LSM5-207ENST00000410044 MAP2K5Q13163 448 aa17.43■□□□□ 0.38
LSM5-207ENST00000410044 IFFO2Q5TF58 517 aa17.43■□□□□ 0.38
LSM5-207ENST00000410044 SLC30A10Q6XR72 485 aa17.43■□□□□ 0.38
LSM5-207ENST00000410044 ZNF467Q7Z7K2 595 aaPredicted RBP17.43■□□□□ 0.38
LSM5-207ENST00000410044 DIS3L2Q8IYB7 885 aaKnown RBP17.43■□□□□ 0.38
LSM5-207ENST00000410044 CD99L2Q8TCZ2 262 aa17.43■□□□□ 0.38
LSM5-207ENST00000410044 OXER1Q8TDS5 423 aa17.43■□□□□ 0.38
LSM5-207ENST00000410044 SOCS4Q8WXH5 440 aa17.43■□□□□ 0.38
LSM5-207ENST00000410044 TAAR1Q96RJ0 339 aa17.43■□□□□ 0.38
LSM5-207ENST00000410044 ARHGAP39Q9C0H5 1083 aa17.43■□□□□ 0.38
LSM5-207ENST00000410044 BRMS1Q9HCU9 246 aa17.43■□□□□ 0.38
LSM5-207ENST00000410044 BIN2Q9UBW5 565 aaPredicted RBP17.43■□□□□ 0.38
LSM5-207ENST00000410044 MTMR6Q9Y217 621 aa17.43■□□□□ 0.38
LSM5-207ENST00000410044 PLXNA1Q9UIW2 1896 aa17.43■□□□□ 0.38
LSM5-207ENST00000410044 FRMPD4Q14CM0 1322 aa17.43■□□□□ 0.38
LSM5-207ENST00000410044 POTEB2H3BUK9 544 aa17.42■□□□□ 0.38
LSM5-207ENST00000410044 FOXN1O15353 648 aa17.42■□□□□ 0.38
LSM5-207ENST00000410044 HSPA8P11142 646 aaKnown RBP17.42■□□□□ 0.38
LSM5-207ENST00000410044 FOSBP53539 338 aa17.42■□□□□ 0.38
LSM5-207ENST00000410044 UBE2SQ16763 222 aa17.42■□□□□ 0.38
LSM5-207ENST00000410044 CRYGNQ8WXF5 182 aa17.42■□□□□ 0.38
LSM5-207ENST00000410044 FGD4Q96M96 766 aa17.42■□□□□ 0.38
LSM5-207ENST00000410044 SLC5A4Q9NY91 659 aa17.42■□□□□ 0.38
LSM5-207ENST00000410044 ADD3Q9UEY8 706 aaKnown RBP17.42■□□□□ 0.38
LSM5-207ENST00000410044 TSKSQ9UJT2 592 aa17.42■□□□□ 0.38
LSM5-207ENST00000410044 RPTORQ8N122 1335 aa17.42■□□□□ 0.38
LSM5-207ENST00000410044 ZSWIM8A7E2V4 1837 aa17.42■□□□□ 0.38
LSM5-207ENST00000410044 SOWAHBA6NEL2 793 aa17.41■□□□□ 0.38
LSM5-207ENST00000410044 IGHA2P01877 340 aa17.41■□□□□ 0.38
LSM5-207ENST00000410044 HSPA1AP0DMV8 641 aaKnown RBP17.41■□□□□ 0.38
LSM5-207ENST00000410044 HSPA1BP0DMV9 641 aaKnown RBP17.41■□□□□ 0.38
LSM5-207ENST00000410044 XRCC5P13010 732 aaKnown RBP17.41■□□□□ 0.38
LSM5-207ENST00000410044 PRMT2P55345 433 aa17.41■□□□□ 0.38
LSM5-207ENST00000410044 CNTN2Q02246 1040 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms