RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 LHX6Q9UPM6 363 aa8.71□□□□□ -1.02
UBE2F-204ENST00000409953 ZNFX1Q9P2E3 1918 aaKnown RBP8.71□□□□□ -1.02
UBE2F-204ENST00000409953 MROH7-TTC4A0A0A0MT08 1334 aa8.71□□□□□ -1.02
UBE2F-204ENST00000409953 ATG2AQ2TAZ0 1938 aa8.7□□□□□ -1.02
UBE2F-204ENST00000409953 SMG1Q96Q15 3661 aaKnown RBP8.7□□□□□ -1.02
UBE2F-204ENST00000409953 SNPHO15079 494 aa8.7□□□□□ -1.02
UBE2F-204ENST00000409953 GH2P01242 217 aa8.7□□□□□ -1.02
UBE2F-204ENST00000409953 NKX3-2P78367 333 aa8.7□□□□□ -1.02
UBE2F-204ENST00000409953 MTMR3Q13615 1198 aa8.7□□□□□ -1.02
UBE2F-204ENST00000409953 ACVR2BQ13705 512 aa8.7□□□□□ -1.02
UBE2F-204ENST00000409953 NEUROD2Q15784 382 aa8.7□□□□□ -1.02
UBE2F-204ENST00000409953 LRRC24Q50LG9 513 aa8.7□□□□□ -1.02
UBE2F-204ENST00000409953 CWF19L1Q69YN2 538 aaKnown RBP8.7□□□□□ -1.02
UBE2F-204ENST00000409953 SLF2Q8IX21 1173 aa8.7□□□□□ -1.02
UBE2F-204ENST00000409953 UBALD2Q8IYN6 164 aa8.7□□□□□ -1.02
UBE2F-204ENST00000409953 MSL3Q8N5Y2 521 aaKnown RBP8.7□□□□□ -1.02
UBE2F-204ENST00000409953 DTWD2Q8NBA8 298 aa8.7□□□□□ -1.02
UBE2F-204ENST00000409953 FLCNQ8NFG4 579 aa8.7□□□□□ -1.02
UBE2F-204ENST00000409953 LINS1Q8NG48 757 aa8.7□□□□□ -1.02
UBE2F-204ENST00000409953 FAM163AQ96GL9 167 aaPredicted RBP8.7□□□□□ -1.02
UBE2F-204ENST00000409953 INSL6Q9Y581 213 aa8.7□□□□□ -1.02
UBE2F-204ENST00000409953 PCDHGA4Q9Y5G9 962 aa8.7□□□□□ -1.02
UBE2F-204ENST00000409953 IGF2RP11717 2491 aa8.7□□□□□ -1.02
UBE2F-204ENST00000409953 GPR75-ASB3A0A0A6YYF3 556 aa8.69□□□□□ -1.02
UBE2F-204ENST00000409953 PI15O43692 258 aa8.69□□□□□ -1.02
UBE2F-204ENST00000409953 CSPG5O95196 566 aa8.69□□□□□ -1.02
UBE2F-204ENST00000409953 BRD1O95696 1058 aa8.69□□□□□ -1.02
UBE2F-204ENST00000409953 SLC25A27O95847 323 aa8.69□□□□□ -1.02
UBE2F-204ENST00000409953 ARP10275 920 aa8.69□□□□□ -1.02
UBE2F-204ENST00000409953 ZNF200P98182 395 aaPredicted RBP8.69□□□□□ -1.02
UBE2F-204ENST00000409953 RING1Q06587 406 aa8.69□□□□□ -1.02
UBE2F-204ENST00000409953 COASYQ13057 564 aa8.69□□□□□ -1.02
UBE2F-204ENST00000409953 ADAM15Q13444 863 aa8.69□□□□□ -1.02
UBE2F-204ENST00000409953 PUM3Q15397 648 aaKnown RBP8.69□□□□□ -1.02
UBE2F-204ENST00000409953 ZC3H14Q6PJT7 736 aaKnown RBP8.69□□□□□ -1.02
UBE2F-204ENST00000409953 PRR23BQ6ZRT6 265 aa8.69□□□□□ -1.02
UBE2F-204ENST00000409953 FBXO11Q86XK2 927 aa8.69□□□□□ -1.02
UBE2F-204ENST00000409953 ACER1Q8TDN7 264 aa8.69□□□□□ -1.02
UBE2F-204ENST00000409953 TANGO6Q9C0B7 1094 aa8.69□□□□□ -1.02
UBE2F-204ENST00000409953 NCDNQ9UBB6 729 aa8.69□□□□□ -1.02
UBE2F-204ENST00000409953 ASTN1O14525 1302 aa8.69□□□□□ -1.02
UBE2F-204ENST00000409953 TAF4O00268 1085 aa8.68□□□□□ -1.02
UBE2F-204ENST00000409953 ZEB2O60315 1214 aa8.68□□□□□ -1.02
UBE2F-204ENST00000409953 AOC1P19801 751 aa8.68□□□□□ -1.02
UBE2F-204ENST00000409953 FGFR2P21802 821 aa8.68□□□□□ -1.02
UBE2F-204ENST00000409953 PMLP29590 882 aa8.68□□□□□ -1.02
UBE2F-204ENST00000409953 FSCN1Q16658 493 aaKnown RBP8.68□□□□□ -1.02
UBE2F-204ENST00000409953 CNKSR3Q6P9H4 555 aa8.68□□□□□ -1.02
UBE2F-204ENST00000409953 MAMDC4Q6UXC1 1216 aa8.68□□□□□ -1.02
UBE2F-204ENST00000409953 NOL8Q76FK4 1167 aaKnown RBP8.68□□□□□ -1.02
UBE2F-204ENST00000409953 TMEM192Q8IY95 271 aa8.68□□□□□ -1.02
UBE2F-204ENST00000409953 GPR161Q8N6U8 529 aaKnown RBP8.68□□□□□ -1.02
UBE2F-204ENST00000409953 ATG4CQ96DT6 458 aa8.68□□□□□ -1.02
UBE2F-204ENST00000409953 SMOC2Q9H3U7 446 aa8.68□□□□□ -1.02
UBE2F-204ENST00000409953 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.68□□□□□ -1.02
UBE2F-204ENST00000409953 CLEC1BQ9P126 229 aa8.68□□□□□ -1.02
UBE2F-204ENST00000409953 SORCS3Q9UPU3 1222 aa8.68□□□□□ -1.02
UBE2F-204ENST00000409953 USP9XQ93008 2570 aaPredicted RBP8.67□□□□□ -1.02
UBE2F-204ENST00000409953 SP100P23497 879 aaPredicted RBP8.67□□□□□ -1.02
UBE2F-204ENST00000409953 SHC2P98077 582 aa8.67□□□□□ -1.02
UBE2F-204ENST00000409953 COL4A3Q01955 1670 aa8.67□□□□□ -1.02
UBE2F-204ENST00000409953 RAB3GAP1Q15042 981 aa8.67□□□□□ -1.02
UBE2F-204ENST00000409953 TCTN1Q2MV58 587 aa8.67□□□□□ -1.02
UBE2F-204ENST00000409953 G2E3Q7L622 706 aa8.67□□□□□ -1.02
UBE2F-204ENST00000409953 TLK2Q86UE8 772 aa8.67□□□□□ -1.02
UBE2F-204ENST00000409953 DHX37Q8IY37 1157 aaKnown RBP8.67□□□□□ -1.02
UBE2F-204ENST00000409953 ZGPATQ8N5A5 531 aaKnown RBP8.67□□□□□ -1.02
UBE2F-204ENST00000409953 SUMF1Q8NBK3 374 aa8.67□□□□□ -1.02
UBE2F-204ENST00000409953 DNAAF4Q8WXU2 420 aa8.67□□□□□ -1.02
UBE2F-204ENST00000409953 RIN2Q8WYP3 895 aaPredicted RBP8.67□□□□□ -1.02
UBE2F-204ENST00000409953 DHX36Q9H2U1 1008 aaKnown RBP8.67□□□□□ -1.02
UBE2F-204ENST00000409953 ABCF2Q9UG63 623 aa8.67□□□□□ -1.02
UBE2F-204ENST00000409953 DENND2AQ9ULE3 1009 aa8.67□□□□□ -1.02
UBE2F-204ENST00000409953 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.66□□□□□ -1.02
UBE2F-204ENST00000409953 ABHD14A-ACY1A0A1B0GW23 586 aa8.66□□□□□ -1.02
UBE2F-204ENST00000409953 ATF7P17544 494 aaPredicted RBP8.66□□□□□ -1.02
UBE2F-204ENST00000409953 HTRA4P83105 476 aaPredicted RBP8.66□□□□□ -1.02
UBE2F-204ENST00000409953 BFSP2Q13515 415 aa8.66□□□□□ -1.02
UBE2F-204ENST00000409953 TMEM132BQ14DG7 1078 aa8.66□□□□□ -1.02
UBE2F-204ENST00000409953 LRRFIP1Q32MZ4 808 aaKnown RBP8.66□□□□□ -1.02
UBE2F-204ENST00000409953 VARS2Q5ST30 1063 aaKnown RBP8.66□□□□□ -1.02
UBE2F-204ENST00000409953 TEX11Q8IYF3 940 aa8.66□□□□□ -1.02
UBE2F-204ENST00000409953 C8orf58Q8NAV2 365 aa8.66□□□□□ -1.02
UBE2F-204ENST00000409953 LMAN2LQ9H0V9 348 aa8.66□□□□□ -1.02
UBE2F-204ENST00000409953 ABHD16BQ9H3Z7 469 aa8.66□□□□□ -1.02
UBE2F-204ENST00000409953 GNL3LQ9NVN8 582 aaKnown RBP8.66□□□□□ -1.02
UBE2F-204ENST00000409953 BARX2Q9UMQ3 279 aaPredicted RBP8.66□□□□□ -1.02
UBE2F-204ENST00000409953 C1QTNF9BB2RNN3 333 aa8.65□□□□□ -1.02
UBE2F-204ENST00000409953 GRM6O15303 877 aa8.65□□□□□ -1.02
UBE2F-204ENST00000409953 EFCAB14O75071 495 aa8.65□□□□□ -1.02
UBE2F-204ENST00000409953 FLOT1O75955 427 aa8.65□□□□□ -1.02
UBE2F-204ENST00000409953 MAP4K4O95819 1239 aaPredicted RBP8.65□□□□□ -1.02
UBE2F-204ENST00000409953 C1QTNF9P0C862 333 aa8.65□□□□□ -1.02
UBE2F-204ENST00000409953 PTGS1P23219 599 aa8.65□□□□□ -1.02
UBE2F-204ENST00000409953 MLLT3P42568 568 aaPredicted RBP8.65□□□□□ -1.02
UBE2F-204ENST00000409953 TNFAIP2Q03169 654 aa8.65□□□□□ -1.02
UBE2F-204ENST00000409953 GPNMBQ14956 572 aa8.65□□□□□ -1.02
UBE2F-204ENST00000409953 FAM47CQ5HY64 1035 aa8.65□□□□□ -1.02
UBE2F-204ENST00000409953 UNQ6494/PRO21346Q6UXR6 183 aa8.65□□□□□ -1.02
UBE2F-204ENST00000409953 METTL16Q86W50 562 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms