RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 BICD2Q8TD16 824 aa14.39□□□□□ -0.11
PMS1-204ENST00000409823 USP28Q96RU2 1077 aa14.39□□□□□ -0.11
PMS1-204ENST00000409823 PORCNQ9H237 461 aa14.39□□□□□ -0.11
PMS1-204ENST00000409823 DDX49Q9Y6V7 483 aaKnown RBP14.39□□□□□ -0.11
PMS1-204ENST00000409823 GCOM1H8Y6P7 765 aaPredicted RBP14.39□□□□□ -0.11
PMS1-204ENST00000409823 POLR2MP0CAP2 368 aa14.39□□□□□ -0.11
PMS1-204ENST00000409823 VEGFBP49765 207 aa14.39□□□□□ -0.11
PMS1-204ENST00000409823 RPS6P62753 249 aaKnown RBP14.39□□□□□ -0.11
PMS1-204ENST00000409823 SREBF2Q12772 1141 aa14.39□□□□□ -0.11
PMS1-204ENST00000409823 NOGQ13253 232 aa14.39□□□□□ -0.11
PMS1-204ENST00000409823 GALNT17Q6IS24 598 aa14.39□□□□□ -0.11
PMS1-204ENST00000409823 SLC30A10Q6XR72 485 aa14.39□□□□□ -0.11
PMS1-204ENST00000409823 DAGLBQ8NCG7 672 aa14.39□□□□□ -0.11
PMS1-204ENST00000409823 EFCC1Q9HA90 598 aa14.39□□□□□ -0.11
PMS1-204ENST00000409823 COL20A1Q9P218 1284 aa14.39□□□□□ -0.11
PMS1-204ENST00000409823 ATP6V1DQ9Y5K8 247 aa14.39□□□□□ -0.11
PMS1-204ENST00000409823 CLIC4Q9Y696 253 aa14.39□□□□□ -0.11
PMS1-204ENST00000409823 OAZ1P54368 228 aa14.39□□□□□ -0.11
PMS1-204ENST00000409823 TBCKQ8TEA7 893 aa14.39□□□□□ -0.11
PMS1-204ENST00000409823 UIMC1Q96RL1 719 aa14.39□□□□□ -0.11
PMS1-204ENST00000409823 SLC45A1Q9Y2W3 748 aa14.39□□□□□ -0.11
PMS1-204ENST00000409823 RABGAP1Q9Y3P9 1069 aa14.39□□□□□ -0.11
PMS1-204ENST00000409823 PCDHB6Q9Y5E3 794 aa14.39□□□□□ -0.11
PMS1-204ENST00000409823 ATP2A1O14983 1001 aa14.38□□□□□ -0.11
PMS1-204ENST00000409823 CLK2P49760 499 aaKnown RBP14.38□□□□□ -0.11
PMS1-204ENST00000409823 BAATQ14032 418 aaPredicted RBP14.38□□□□□ -0.11
PMS1-204ENST00000409823 SPDYE3A6NKU9 549 aa14.38□□□□□ -0.11
PMS1-204ENST00000409823 INHBEP58166 350 aa14.38□□□□□ -0.11
PMS1-204ENST00000409823 TRAF1Q13077 416 aa14.38□□□□□ -0.11
PMS1-204ENST00000409823 CRHR2Q13324 411 aa14.38□□□□□ -0.11
PMS1-204ENST00000409823 LETM2Q2VYF4 491 aa14.38□□□□□ -0.11
PMS1-204ENST00000409823 RNF207Q6ZRF8 634 aa14.38□□□□□ -0.11
PMS1-204ENST00000409823 GPRC5AQ8NFJ5 357 aa14.38□□□□□ -0.11
PMS1-204ENST00000409823 ACAD9Q9H845 621 aa14.38□□□□□ -0.11
PMS1-204ENST00000409823 MRVI1Q9Y6F6 885 aa14.38□□□□□ -0.11
PMS1-204ENST00000409823 NONOQ15233 471 aaKnown RBP eCLIP14.37□□□□□ -0.11
PMS1-204ENST00000409823 ZNF174Q15697 407 aa14.37□□□□□ -0.11
PMS1-204ENST00000409823 RIOX2Q8IUF8 465 aa14.37□□□□□ -0.11
PMS1-204ENST00000409823 ANKRD35Q8N283 1001 aa14.37□□□□□ -0.11
PMS1-204ENST00000409823 A1CFQ9NQ94 594 aaKnown RBP14.37□□□□□ -0.11
PMS1-204ENST00000409823 MCM7P33993 719 aa14.37□□□□□ -0.11
PMS1-204ENST00000409823 TM4SF4P48230 202 aa14.37□□□□□ -0.11
PMS1-204ENST00000409823 CCAR1Q8IX12 1150 aaKnown RBP14.37□□□□□ -0.11
PMS1-204ENST00000409823 ANO3Q9BYT9 981 aa14.37□□□□□ -0.11
PMS1-204ENST00000409823 PGK2P07205 417 aa14.36□□□□□ -0.11
PMS1-204ENST00000409823 KRT85P78386 507 aa14.36□□□□□ -0.11
PMS1-204ENST00000409823 SF3A1Q15459 793 aaKnown RBP14.36□□□□□ -0.11
PMS1-204ENST00000409823 KRT25Q7Z3Z0 450 aa14.36□□□□□ -0.11
PMS1-204ENST00000409823 MCF2L2Q86YR7 1114 aa14.36□□□□□ -0.11
PMS1-204ENST00000409823 CCNT1O60563 726 aaKnown RBP14.36□□□□□ -0.11
PMS1-204ENST00000409823 RGS22Q8NE09 1264 aa14.36□□□□□ -0.11
PMS1-204ENST00000409823 SYTL5Q8TDW5 730 aaPredicted RBP14.36□□□□□ -0.11
PMS1-204ENST00000409823 TAAR1Q96RJ0 339 aa14.36□□□□□ -0.11
PMS1-204ENST00000409823 PIK3CDO00329 1044 aa14.35□□□□□ -0.11
PMS1-204ENST00000409823 MARCKSP29966 332 aaPredicted RBP14.35□□□□□ -0.11
PMS1-204ENST00000409823 GCLCP48506 637 aaPredicted RBP14.35□□□□□ -0.11
PMS1-204ENST00000409823 HSD17B4P51659 736 aa14.35□□□□□ -0.11
PMS1-204ENST00000409823 CNTN2Q02246 1040 aa14.35□□□□□ -0.11
PMS1-204ENST00000409823 RILPL1Q5EBL4 403 aa14.35□□□□□ -0.11
PMS1-204ENST00000409823 GBP4Q96PP9 640 aa14.35□□□□□ -0.11
PMS1-204ENST00000409823 CYP39A1Q9NYL5 469 aa14.35□□□□□ -0.11
PMS1-204ENST00000409823 EDIL3O43854 480 aa14.35□□□□□ -0.11
PMS1-204ENST00000409823 TBC1D8O95759 1140 aa14.35□□□□□ -0.11
PMS1-204ENST00000409823 EIF2AK2P19525 551 aaKnown RBP14.35□□□□□ -0.11
PMS1-204ENST00000409823 TTC38Q5R3I4 469 aa14.35□□□□□ -0.11
PMS1-204ENST00000409823 FAM177A1Q8N128 213 aaPredicted RBP14.35□□□□□ -0.11
PMS1-204ENST00000409823 GLT8D2Q9H1C3 349 aa14.35□□□□□ -0.11
PMS1-204ENST00000409823 TLR2O60603 784 aa14.34□□□□□ -0.11
PMS1-204ENST00000409823 PRPF40AO75400 957 aaKnown RBP14.34□□□□□ -0.11
PMS1-204ENST00000409823 TRPA1O75762 1119 aa14.34□□□□□ -0.11
PMS1-204ENST00000409823 TDP2O95551 362 aa14.34□□□□□ -0.11
PMS1-204ENST00000409823 ANO1Q5XXA6 986 aa14.34□□□□□ -0.11
PMS1-204ENST00000409823 SPATA32Q96LK8 384 aa14.34□□□□□ -0.11
PMS1-204ENST00000409823 ZNF396Q96N95 335 aaPredicted RBP14.34□□□□□ -0.11
PMS1-204ENST00000409823 NOL7Q9UMY1 257 aaKnown RBP14.34□□□□□ -0.11
PMS1-204ENST00000409823 TCHHQ07283 1943 aa14.34□□□□□ -0.11
PMS1-204ENST00000409823 NEK8Q86SG6 692 aa14.34□□□□□ -0.11
PMS1-204ENST00000409823 CHST13Q8NET6 341 aa14.34□□□□□ -0.11
PMS1-204ENST00000409823 IL31RAQ8NI17 732 aa14.34□□□□□ -0.11
PMS1-204ENST00000409823 CYP2W1Q8TAV3 490 aa14.34□□□□□ -0.11
PMS1-204ENST00000409823 GJA10Q969M2 543 aa14.34□□□□□ -0.11
PMS1-204ENST00000409823 RMDN3Q96TC7 470 aa14.34□□□□□ -0.11
PMS1-204ENST00000409823 ZFYVE28Q9HCC9 887 aa14.34□□□□□ -0.11
PMS1-204ENST00000409823 ARHGAP4P98171 946 aa14.34□□□□□ -0.11
PMS1-204ENST00000409823 FAM110CQ1W6H9 321 aa14.34□□□□□ -0.11
PMS1-204ENST00000409823 LEO1Q8WVC0 666 aaPredicted RBP14.34□□□□□ -0.11
PMS1-204ENST00000409823 CFAP45Q9UL16 551 aa14.34□□□□□ -0.11
PMS1-204ENST00000409823 PNMA2Q9UL42 364 aa14.34□□□□□ -0.11
PMS1-204ENST00000409823 A0A0G2JMZ2 1700 aa14.33□□□□□ -0.11
PMS1-204ENST00000409823 SLC25A27O95847 323 aa14.33□□□□□ -0.12
PMS1-204ENST00000409823 AP3B2Q13367 1082 aa14.33□□□□□ -0.12
PMS1-204ENST00000409823 STK38Q15208 465 aa14.33□□□□□ -0.12
PMS1-204ENST00000409823 RTEL1Q9NZ71 1219 aa14.33□□□□□ -0.12
PMS1-204ENST00000409823 DNAH12Q6ZR08 3092 aa14.33□□□□□ -0.12
PMS1-204ENST00000409823 C1QTNF8P60827 252 aa14.33□□□□□ -0.12
PMS1-204ENST00000409823 CCNA1P78396 465 aa14.33□□□□□ -0.12
PMS1-204ENST00000409823 NFKBIBQ15653 356 aa14.33□□□□□ -0.12
PMS1-204ENST00000409823 TKFCQ3LXA3 575 aa14.33□□□□□ -0.12
PMS1-204ENST00000409823 GTF3C2Q8WUA4 911 aaPredicted RBP14.33□□□□□ -0.12
PMS1-204ENST00000409823 MMP19Q99542 508 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms