RNA–Protein interactions for RNA: ENST00000409681.1

POLR1A-203, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5 BASIC

Gene POLR1A, Length 6,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-203ENST00000409681 GOLGA6L10A6NI86 522 aa11.22□□□□□ -0.61
POLR1A-203ENST00000409681 K7ENM7 598 aa11.22□□□□□ -0.61
POLR1A-203ENST00000409681 PTGDRQ13258 359 aa11.22□□□□□ -0.61
POLR1A-203ENST00000409681 DNAJC25Q9H1X3 360 aa11.22□□□□□ -0.61
POLR1A-203ENST00000409681 RRAGCQ9HB90 399 aa11.22□□□□□ -0.61
POLR1A-203ENST00000409681 ROBO1Q9Y6N7 1651 aa11.22□□□□□ -0.61
POLR1A-203ENST00000409681 MMP1P03956 469 aa11.22□□□□□ -0.61
POLR1A-203ENST00000409681 PDXDC2PQ6P474 469 aa11.22□□□□□ -0.61
POLR1A-203ENST00000409681 C16orf86Q6ZW13 317 aa11.22□□□□□ -0.61
POLR1A-203ENST00000409681 ELMSAN1Q6PJG2 1045 aa11.21□□□□□ -0.61
POLR1A-203ENST00000409681 XRN1Q8IZH2 1706 aaKnown RBP11.21□□□□□ -0.61
POLR1A-203ENST00000409681 NSUN7Q8NE18 718 aaKnown RBP11.21□□□□□ -0.61
POLR1A-203ENST00000409681 MXD3Q9BW11 206 aa11.21□□□□□ -0.61
POLR1A-203ENST00000409681 CTNND2Q9UQB3 1225 aa11.21□□□□□ -0.61
POLR1A-203ENST00000409681 NEDD4P46934 1319 aa11.21□□□□□ -0.61
POLR1A-203ENST00000409681 TM4SF1P30408 202 aa11.21□□□□□ -0.61
POLR1A-203ENST00000409681 ENAHQ8N8S7 591 aaPredicted RBP11.21□□□□□ -0.61
POLR1A-203ENST00000409681 INO80BQ9C086 356 aaPredicted RBP11.21□□□□□ -0.61
POLR1A-203ENST00000409681 VCPKMTQ9H867 229 aa11.21□□□□□ -0.61
POLR1A-203ENST00000409681 ORC2Q13416 577 aaPredicted RBP11.21□□□□□ -0.61
POLR1A-203ENST00000409681 TCP11Q8WWU5 503 aa11.21□□□□□ -0.61
POLR1A-203ENST00000409681 CEP170P1Q96L14 293 aa11.21□□□□□ -0.61
POLR1A-203ENST00000409681 TMEM39BQ9GZU3 492 aa11.21□□□□□ -0.61
POLR1A-203ENST00000409681 MTMR4Q9NYA4 1195 aa11.21□□□□□ -0.61
POLR1A-203ENST00000409681 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.21□□□□□ -0.61
POLR1A-203ENST00000409681 N4BP1O75113 896 aaKnown RBP11.21□□□□□ -0.62
POLR1A-203ENST00000409681 KRT19P08727 400 aa11.21□□□□□ -0.62
POLR1A-203ENST00000409681 KRT5P13647 590 aa11.21□□□□□ -0.62
POLR1A-203ENST00000409681 KRT76Q01546 638 aa11.21□□□□□ -0.62
POLR1A-203ENST00000409681 SEPT7Q16181 437 aaKnown RBP11.21□□□□□ -0.62
POLR1A-203ENST00000409681 FAM83AQ86UY5 434 aa11.21□□□□□ -0.62
POLR1A-203ENST00000409681 MYOCDQ8IZQ8 938 aa11.21□□□□□ -0.62
POLR1A-203ENST00000409681 SMC1BQ8NDV3 1235 aa11.21□□□□□ -0.62
POLR1A-203ENST00000409681 GPRC5AQ8NFJ5 357 aa11.21□□□□□ -0.62
POLR1A-203ENST00000409681 STK36Q9NRP7 1315 aa11.21□□□□□ -0.62
POLR1A-203ENST00000409681 DDNO94850 711 aaPredicted RBP11.2□□□□□ -0.62
POLR1A-203ENST00000409681 TNNI1P19237 187 aa11.2□□□□□ -0.62
POLR1A-203ENST00000409681 KRT83P78385 493 aa11.2□□□□□ -0.62
POLR1A-203ENST00000409681 HOOK3Q86VS8 718 aa11.2□□□□□ -0.62
POLR1A-203ENST00000409681 ZNF354CQ86Y25 554 aa11.2□□□□□ -0.62
POLR1A-203ENST00000409681 CCDC155Q8N6L0 562 aa11.2□□□□□ -0.62
POLR1A-203ENST00000409681 CLSTN2Q9H4D0 955 aa11.2□□□□□ -0.62
POLR1A-203ENST00000409681 PCDHA6Q9UN73 950 aa11.2□□□□□ -0.62
POLR1A-203ENST00000409681 PCDHA8Q9Y5H6 950 aa11.2□□□□□ -0.62
POLR1A-203ENST00000409681 FCGRTP55899 365 aa11.2□□□□□ -0.62
POLR1A-203ENST00000409681 RAD51AP2Q09MP3 1159 aa11.2□□□□□ -0.62
POLR1A-203ENST00000409681 FAM205AQ6ZU69 1335 aa11.2□□□□□ -0.62
POLR1A-203ENST00000409681 HOXA13P31271 388 aaPredicted RBP11.2□□□□□ -0.62
POLR1A-203ENST00000409681 MTMR1Q13613 665 aa11.2□□□□□ -0.62
POLR1A-203ENST00000409681 TRIM14Q14142 442 aa11.2□□□□□ -0.62
POLR1A-203ENST00000409681 SPECC1Q5M775 1068 aa11.2□□□□□ -0.62
POLR1A-203ENST00000409681 PANK4Q9NVE7 773 aa11.2□□□□□ -0.62
POLR1A-203ENST00000409681 STK17AQ9UEE5 414 aa11.2□□□□□ -0.62
POLR1A-203ENST00000409681 CYP4A11Q02928 519 aa11.2□□□□□ -0.62
POLR1A-203ENST00000409681 PFKFB3Q16875 520 aaPredicted RBP11.2□□□□□ -0.62
POLR1A-203ENST00000409681 NAA15Q9BXJ9 866 aaKnown RBP11.2□□□□□ -0.62
POLR1A-203ENST00000409681 KIAA1024Q9UPX6 916 aa11.2□□□□□ -0.62
POLR1A-203ENST00000409681 SALL1Q9NSC2 1324 aa11.2□□□□□ -0.62
POLR1A-203ENST00000409681 GCLCP48506 637 aaPredicted RBP11.2□□□□□ -0.62
POLR1A-203ENST00000409681 SMC1AQ14683 1233 aaKnown RBP11.2□□□□□ -0.62
POLR1A-203ENST00000409681 CCDC42Q96M95 316 aa11.2□□□□□ -0.62
POLR1A-203ENST00000409681 LUC7L2Q9Y383 392 aaKnown RBP11.2□□□□□ -0.62
POLR1A-203ENST00000409681 MYCP01106 439 aaPredicted RBP11.19□□□□□ -0.62
POLR1A-203ENST00000409681 CMA1P23946 247 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 RAPGEF1Q13905 1077 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 IQCDQ96DY2 449 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 SYNRGQ9UMZ2 1314 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 SFNP31947 248 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 LUZP1Q86V48 1076 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 MB21D2Q8IYB1 491 aaPredicted RBP11.19□□□□□ -0.62
POLR1A-203ENST00000409681 TTC16Q8NEE8 873 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 NEK9Q8TD19 979 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.19□□□□□ -0.62
POLR1A-203ENST00000409681 TBC1D7Q9P0N9 293 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 TLR3O15455 904 aaKnown RBP11.19□□□□□ -0.62
POLR1A-203ENST00000409681 GTPBP6O43824 516 aaPredicted RBP11.19□□□□□ -0.62
POLR1A-203ENST00000409681 BRD1O95696 1058 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 BCRP11274 1271 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 NEFHP12036 1026 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 GBP2P32456 591 aaPredicted RBP11.19□□□□□ -0.62
POLR1A-203ENST00000409681 PTPN14Q15678 1187 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 UBE2SQ16763 222 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 ATRNO75882 1429 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 QRICH1Q2TAL8 776 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 NBPF11Q86T75 865 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 LDHDQ86WU2 507 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 CHST13Q8NET6 341 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 PFASO15067 1338 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 TNNT1P13805 278 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 CASQ1P31415 396 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 LIN9Q5TKA1 542 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 NELFCDQ8IXH7 590 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 NLRP7Q8WX94 980 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 CAMKK2Q96RR4 588 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 ZSWIM4Q9H7M6 989 aa11.19□□□□□ -0.62
POLR1A-203ENST00000409681 MANSC4A6NHS7 340 aaPredicted RBP11.18□□□□□ -0.62
POLR1A-203ENST00000409681 WDR64B1ANS9 1081 aa11.18□□□□□ -0.62
POLR1A-203ENST00000409681 INO80B-WBP1J3KQ70 363 aa11.18□□□□□ -0.62
POLR1A-203ENST00000409681 PPP6R2O75170 966 aa11.18□□□□□ -0.62
POLR1A-203ENST00000409681 ADCY5O95622 1261 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms