RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 FERMT3Q86UX7 667 aa16.19■□□□□ 0.18
CHRNA1-204ENST00000409323 ZNF713Q8N859 430 aaPredicted RBP16.19■□□□□ 0.18
CHRNA1-204ENST00000409323 FBXO18Q8NFZ0 1043 aa16.19■□□□□ 0.18
CHRNA1-204ENST00000409323 ZNF296Q8WUU4 475 aaPredicted RBP16.19■□□□□ 0.18
CHRNA1-204ENST00000409323 CUL5Q93034 780 aa16.19■□□□□ 0.18
CHRNA1-204ENST00000409323 ZMYND12Q9H0C1 365 aa16.19■□□□□ 0.18
CHRNA1-204ENST00000409323 C6orf50Q9HD87 102 aa16.19■□□□□ 0.18
CHRNA1-204ENST00000409323 RIC8AQ9NPQ8 531 aa16.19■□□□□ 0.18
CHRNA1-204ENST00000409323 SH3GLB2Q9NR46 395 aa16.19■□□□□ 0.18
CHRNA1-204ENST00000409323 KIF3AQ9Y496 699 aa16.19■□□□□ 0.18
CHRNA1-204ENST00000409323 CASP8AP2Q9UKL3 1982 aa16.19■□□□□ 0.18
CHRNA1-204ENST00000409323 KIF28PB7ZC32 967 aa16.18■□□□□ 0.18
CHRNA1-204ENST00000409323 GCOM1H8Y6P7 765 aaPredicted RBP16.18■□□□□ 0.18
CHRNA1-204ENST00000409323 TNPO2O14787 897 aaKnown RBP16.18■□□□□ 0.18
CHRNA1-204ENST00000409323 POLR2MP0CAP2 368 aa16.18■□□□□ 0.18
CHRNA1-204ENST00000409323 PPP1R18Q6NYC8 613 aa16.18■□□□□ 0.18
CHRNA1-204ENST00000409323 PLEKHH3Q7Z736 793 aa16.18■□□□□ 0.18
CHRNA1-204ENST00000409323 DIS3L2Q8IYB7 885 aaKnown RBP16.18■□□□□ 0.18
CHRNA1-204ENST00000409323 BLIDQ8IZY5 108 aa16.18■□□□□ 0.18
CHRNA1-204ENST00000409323 SHCBP1Q8NEM2 672 aa16.18■□□□□ 0.18
CHRNA1-204ENST00000409323 CCDC12Q8WUD4 166 aaPredicted RBP16.18■□□□□ 0.18
CHRNA1-204ENST00000409323 ZFP91Q96JP5 570 aaPredicted RBP16.18■□□□□ 0.18
CHRNA1-204ENST00000409323 TRIM47Q96LD4 638 aa16.18■□□□□ 0.18
CHRNA1-204ENST00000409323 CFHR5Q9BXR6 569 aa16.18■□□□□ 0.18
CHRNA1-204ENST00000409323 MROH8Q9H579 483 aa16.18■□□□□ 0.18
CHRNA1-204ENST00000409323 SAGE1Q9NXZ1 904 aa16.18■□□□□ 0.18
CHRNA1-204ENST00000409323 CYP39A1Q9NYL5 469 aa16.18■□□□□ 0.18
CHRNA1-204ENST00000409323 PCDHA4Q9UN74 947 aa16.18■□□□□ 0.18
CHRNA1-204ENST00000409323 IVNS1ABPQ9Y6Y0 642 aa16.18■□□□□ 0.18
CHRNA1-204ENST00000409323 FOXN1O15353 648 aa16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 FCER1AP12319 257 aa16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 ADORA2AP29274 412 aa16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 MAPK4P31152 587 aa16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 KCTD2Q14681 263 aa16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 EARS2Q5JPH6 523 aaKnown RBP16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 SYTL5Q8TDW5 730 aaPredicted RBP16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 TAAR1Q96RJ0 339 aa16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 STX6O43752 255 aa16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 COBLO75128 1261 aa16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 HSPA1AP0DMV8 641 aaKnown RBP16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 HSPA1BP0DMV9 641 aaKnown RBP16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 PTPREP23469 700 aa16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 KRT2P35908 639 aa16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 TRAF1Q13077 416 aa16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 FOXD4L6Q3SYB3 417 aaPredicted RBP16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 FOXD4L3Q6VB84 417 aaPredicted RBP16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 MCF2L2Q86YR7 1114 aa16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 JMYQ8N9B5 988 aa16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 FBXO40Q9UH90 709 aa16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 PNMA2Q9UL42 364 aa16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 PCDHA6Q9UN73 950 aa16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 GABRQQ9UN88 632 aa16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 MTMR6Q9Y217 621 aa16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 PCDHA8Q9Y5H6 950 aa16.17■□□□□ 0.18
CHRNA1-204ENST00000409323 PLXNA1Q9UIW2 1896 aa16.16■□□□□ 0.18
CHRNA1-204ENST00000409323 MCM3APO60318 1980 aa16.16■□□□□ 0.18
CHRNA1-204ENST00000409323 ESYT2A0FGR8 921 aa16.16■□□□□ 0.18
CHRNA1-204ENST00000409323 FKTNO75072 461 aa16.16■□□□□ 0.18
CHRNA1-204ENST00000409323 GNA11P29992 359 aa16.16■□□□□ 0.18
CHRNA1-204ENST00000409323 HSD17B4P51659 736 aa16.16■□□□□ 0.18
CHRNA1-204ENST00000409323 MRPL12P52815 198 aaKnown RBP16.16■□□□□ 0.18
CHRNA1-204ENST00000409323 FCGRTP55899 365 aa16.16■□□□□ 0.18
CHRNA1-204ENST00000409323 GNL2Q13823 731 aaKnown RBP16.16■□□□□ 0.18
CHRNA1-204ENST00000409323 REXO1Q8N1G1 1221 aaKnown RBP16.16■□□□□ 0.18
CHRNA1-204ENST00000409323 ASTN1O14525 1302 aa16.16■□□□□ 0.18
CHRNA1-204ENST00000409323 POTEB2H3BUK9 544 aa16.15■□□□□ 0.18
CHRNA1-204ENST00000409323 EIF2AK2P19525 551 aaKnown RBP16.15■□□□□ 0.18
CHRNA1-204ENST00000409323 CYP2B6P20813 491 aa16.15■□□□□ 0.18
CHRNA1-204ENST00000409323 PDCP20941 246 aa16.15■□□□□ 0.18
CHRNA1-204ENST00000409323 COPB2P35606 906 aa16.15■□□□□ 0.18
CHRNA1-204ENST00000409323 CLK2P49760 499 aaKnown RBP16.15■□□□□ 0.18
CHRNA1-204ENST00000409323 KIF22Q14807 665 aa16.15■□□□□ 0.18
CHRNA1-204ENST00000409323 PIK3AP1Q6ZUJ8 805 aa16.15■□□□□ 0.18
CHRNA1-204ENST00000409323 NPLOC4Q8TAT6 608 aa16.15■□□□□ 0.18
CHRNA1-204ENST00000409323 MYH7BA7E2Y1 1941 aa16.15■□□□□ 0.18
CHRNA1-204ENST00000409323 SOWAHBA6NEL2 793 aa16.14■□□□□ 0.17
CHRNA1-204ENST00000409323 M0R2N6 131 aa16.14■□□□□ 0.17
CHRNA1-204ENST00000409323 ATP2B1P20020 1258 aa16.14■□□□□ 0.17
CHRNA1-204ENST00000409323 PRKCZQ05513 592 aa16.14■□□□□ 0.17
CHRNA1-204ENST00000409323 GRB14Q14449 540 aa16.14■□□□□ 0.17
CHRNA1-204ENST00000409323 SAFBQ15424 915 aaKnown RBP eCLIP16.14■□□□□ 0.17
CHRNA1-204ENST00000409323 FAM173BQ6P4H8 233 aa16.14■□□□□ 0.17
CHRNA1-204ENST00000409323 DPP9Q86TI2 863 aa16.14■□□□□ 0.17
CHRNA1-204ENST00000409323 DAGLBQ8NCG7 672 aa16.14■□□□□ 0.17
CHRNA1-204ENST00000409323 IL31RAQ8NI17 732 aa16.14■□□□□ 0.17
CHRNA1-204ENST00000409323 CHAMP1Q96JM3 812 aa16.14■□□□□ 0.17
CHRNA1-204ENST00000409323 ANO3Q9BYT9 981 aa16.14■□□□□ 0.17
CHRNA1-204ENST00000409323 BRMS1Q9HCU9 246 aa16.14■□□□□ 0.17
CHRNA1-204ENST00000409323 PFASO15067 1338 aa16.14■□□□□ 0.17
CHRNA1-204ENST00000409323 SPDYE3A6NKU9 549 aa16.13■□□□□ 0.17
CHRNA1-204ENST00000409323 DDIT3P35638 169 aa16.13■□□□□ 0.17
CHRNA1-204ENST00000409323 LBX1P52954 281 aa16.13■□□□□ 0.17
CHRNA1-204ENST00000409323 MORN1Q5T089 497 aa16.13■□□□□ 0.17
CHRNA1-204ENST00000409323 TNFRSF25Q93038 417 aa16.13■□□□□ 0.17
CHRNA1-204ENST00000409323 FGD4Q96M96 766 aa16.13■□□□□ 0.17
CHRNA1-204ENST00000409323 RMDN3Q96TC7 470 aa16.13■□□□□ 0.17
CHRNA1-204ENST00000409323 ZDHHC9Q9Y397 364 aa16.13■□□□□ 0.17
CHRNA1-204ENST00000409323 DNAJC25-GNG10A0A024R161 153 aa16.13■□□□□ 0.17
CHRNA1-204ENST00000409323 SLC15A5A6NIM6 579 aa16.13■□□□□ 0.17
CHRNA1-204ENST00000409323 PIK3CDO00329 1044 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms