RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 RIOX1Q9H6W3 641 aa9.65□□□□□ -0.86
GPC3-203ENST00000406757 FEM1BQ9UK73 627 aa9.65□□□□□ -0.86
GPC3-203ENST00000406757 SYNPO2Q9UMS6 1093 aa9.65□□□□□ -0.86
GPC3-203ENST00000406757 COL6A3P12111 3177 aa9.65□□□□□ -0.87
GPC3-203ENST00000406757 USP17L15C9J2P7 530 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 USP17L13C9JLJ4 530 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 USP17L11C9JVI0 530 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 USP17L18D6R9N7 530 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 USP17L22D6RA61 530 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 USP17L17D6RBQ6 530 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 USP17L19D6RCP7 530 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 USP17L20D6RJB6 530 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 RIOK3O14730 519 aaKnown RBP9.64□□□□□ -0.87
GPC3-203ENST00000406757 ADAMTS3O15072 1205 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 PPP1R11O60927 126 aaPredicted RBP9.64□□□□□ -0.87
GPC3-203ENST00000406757 STAT2P52630 851 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 USP17L24Q0WX57 530 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 TRIM32Q13049 653 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 PKP1Q13835 747 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 PPP2R5BQ15173 497 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 CDC37Q16543 378 aaPredicted RBP9.64□□□□□ -0.87
GPC3-203ENST00000406757 QRICH1Q2TAL8 776 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 BTNL9Q6UXG8 535 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 TRIM22Q8IYM9 498 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 DIS3LQ8TF46 1054 aaKnown RBP9.64□□□□□ -0.87
GPC3-203ENST00000406757 CHURC1Q8WUH1 139 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 RRP36Q96EU6 259 aaKnown RBP9.64□□□□□ -0.87
GPC3-203ENST00000406757 P2RX7Q99572 595 aaKnown RBP9.64□□□□□ -0.87
GPC3-203ENST00000406757 SLF1Q9BQI6 1058 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 SPZ1Q9BXG8 430 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 CRISPLD2Q9H0B8 497 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.64□□□□□ -0.87
GPC3-203ENST00000406757 ASCC2Q9H1I8 757 aaPredicted RBP9.64□□□□□ -0.87
GPC3-203ENST00000406757 VPS54Q9P1Q0 977 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 KCNJ14Q9UNX9 436 aa9.64□□□□□ -0.87
GPC3-203ENST00000406757 TRIOBPQ9H2D6 2365 aa9.63□□□□□ -0.87
GPC3-203ENST00000406757 FAM205CA6NFA0 338 aa9.63□□□□□ -0.87
GPC3-203ENST00000406757 SOX1O00570 391 aaPredicted RBP9.63□□□□□ -0.87
GPC3-203ENST00000406757 DEXIO95424 95 aa9.63□□□□□ -0.87
GPC3-203ENST00000406757 GCLCP48506 637 aaPredicted RBP9.63□□□□□ -0.87
GPC3-203ENST00000406757 PABPC4Q13310 644 aaKnown RBP eCLIP9.63□□□□□ -0.87
GPC3-203ENST00000406757 COG2Q14746 738 aa9.63□□□□□ -0.87
GPC3-203ENST00000406757 PFKFB3Q16875 520 aaPredicted RBP9.63□□□□□ -0.87
GPC3-203ENST00000406757 USH1GQ495M9 461 aa9.63□□□□□ -0.87
GPC3-203ENST00000406757 LARP1BQ659C4 914 aaKnown RBP9.63□□□□□ -0.87
GPC3-203ENST00000406757 WWC2Q6AWC2 1192 aa9.63□□□□□ -0.87
GPC3-203ENST00000406757 TYW1BQ6NUM6 668 aa9.63□□□□□ -0.87
GPC3-203ENST00000406757 POTEEQ6S8J3 1075 aa9.63□□□□□ -0.87
GPC3-203ENST00000406757 HEATR3Q7Z4Q2 680 aa9.63□□□□□ -0.87
GPC3-203ENST00000406757 NECAB2Q7Z6G3 386 aa9.63□□□□□ -0.87
GPC3-203ENST00000406757 FAM160B2Q86V87 743 aa9.63□□□□□ -0.87
GPC3-203ENST00000406757 CPXCR1Q8N123 301 aa9.63□□□□□ -0.87
GPC3-203ENST00000406757 AGBL1Q96MI9 1066 aa9.63□□□□□ -0.87
GPC3-203ENST00000406757 RNF26Q9BY78 433 aaPredicted RBP9.63□□□□□ -0.87
GPC3-203ENST00000406757 RAVER2Q9HCJ3 691 aaKnown RBP9.63□□□□□ -0.87
GPC3-203ENST00000406757 GJD2Q9UKL4 321 aa9.63□□□□□ -0.87
GPC3-203ENST00000406757 PPP1R9AQ9ULJ8 1098 aa9.63□□□□□ -0.87
GPC3-203ENST00000406757 CEP290O15078 2479 aa9.62□□□□□ -0.87
GPC3-203ENST00000406757 PNMA6FA0A0J9YX94 578 aa9.62□□□□□ -0.87
GPC3-203ENST00000406757 VPS37CA5D8V6 355 aaPredicted RBP9.62□□□□□ -0.87
GPC3-203ENST00000406757 SPDYE16A6NNV3 312 aaPredicted RBP9.62□□□□□ -0.87
GPC3-203ENST00000406757 ZBTB5O15062 677 aa9.62□□□□□ -0.87
GPC3-203ENST00000406757 ZBED4O75132 1171 aa9.62□□□□□ -0.87
GPC3-203ENST00000406757 HMGCRP04035 888 aa9.62□□□□□ -0.87
GPC3-203ENST00000406757 SCG2P13521 617 aa9.62□□□□□ -0.87
GPC3-203ENST00000406757 SYT1P21579 422 aa9.62□□□□□ -0.87
GPC3-203ENST00000406757 SMARCA1P28370 1054 aa9.62□□□□□ -0.87
GPC3-203ENST00000406757 IRX3P78415 501 aaPredicted RBP9.62□□□□□ -0.87
GPC3-203ENST00000406757 HMGN5P82970 282 aaKnown RBP9.62□□□□□ -0.87
GPC3-203ENST00000406757 C7orf61Q8IZ16 206 aa9.62□□□□□ -0.87
GPC3-203ENST00000406757 PRPF38AQ8NAV1 312 aaKnown RBP9.62□□□□□ -0.87
GPC3-203ENST00000406757 MTMR8Q96EF0 704 aa9.62□□□□□ -0.87
GPC3-203ENST00000406757 LRCH3Q96II8 777 aa9.62□□□□□ -0.87
GPC3-203ENST00000406757 C8orf76Q96K31 380 aa9.62□□□□□ -0.87
GPC3-203ENST00000406757 PAGR1Q9BTK6 254 aa9.62□□□□□ -0.87
GPC3-203ENST00000406757 RANBP17Q9H2T7 1088 aaKnown RBP9.62□□□□□ -0.87
GPC3-203ENST00000406757 HMX1Q9NP08 348 aaPredicted RBP9.62□□□□□ -0.87
GPC3-203ENST00000406757 SEC63Q9UGP8 760 aaKnown RBP9.62□□□□□ -0.87
GPC3-203ENST00000406757 CTDP1Q9Y5B0 961 aaPredicted RBP9.62□□□□□ -0.87
GPC3-203ENST00000406757 LOC285556D6RIA3 1793 aa9.62□□□□□ -0.87
GPC3-203ENST00000406757 ZNF536O15090 1300 aa9.61□□□□□ -0.87
GPC3-203ENST00000406757 RPTORQ8N122 1335 aa9.61□□□□□ -0.87
GPC3-203ENST00000406757 STK36Q9NRP7 1315 aa9.61□□□□□ -0.87
GPC3-203ENST00000406757 A0A1W2PPC1 479 aa9.61□□□□□ -0.87
GPC3-203ENST00000406757 H3BQV1 296 aa9.61□□□□□ -0.87
GPC3-203ENST00000406757 STXBP3O00186 592 aa9.61□□□□□ -0.87
GPC3-203ENST00000406757 VWA5AO00534 786 aa9.61□□□□□ -0.87
GPC3-203ENST00000406757 PLA2G6O60733 806 aa9.61□□□□□ -0.87
GPC3-203ENST00000406757 CAPN2P17655 700 aa9.61□□□□□ -0.87
GPC3-203ENST00000406757 CYP2B6P20813 491 aa9.61□□□□□ -0.87
GPC3-203ENST00000406757 HOXA7P31268 230 aaPredicted RBP9.61□□□□□ -0.87
GPC3-203ENST00000406757 DDIT3P35638 169 aa9.61□□□□□ -0.87
GPC3-203ENST00000406757 PLS1Q14651 629 aa9.61□□□□□ -0.87
GPC3-203ENST00000406757 FOXD4L6Q3SYB3 417 aaPredicted RBP9.61□□□□□ -0.87
GPC3-203ENST00000406757 KRT40Q6A162 431 aa9.61□□□□□ -0.87
GPC3-203ENST00000406757 FOXD4L3Q6VB84 417 aaPredicted RBP9.61□□□□□ -0.87
GPC3-203ENST00000406757 FERMT3Q86UX7 667 aa9.61□□□□□ -0.87
GPC3-203ENST00000406757 FBXO11Q86XK2 927 aa9.61□□□□□ -0.87
GPC3-203ENST00000406757 OXER1Q8TDS5 423 aa9.61□□□□□ -0.87
GPC3-203ENST00000406757 TRIB2Q92519 343 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms