RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 U2SURPO15042 1029 aaKnown RBP7.14□□□□□ -1.27
HMGB1P13-201ENST00000406019 PPP1R11O60927 126 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P13-201ENST00000406019 JAG1P78504 1218 aa7.14□□□□□ -1.27
HMGB1P13-201ENST00000406019 LAPTM5Q13571 262 aa7.14□□□□□ -1.27
HMGB1P13-201ENST00000406019 CBX2Q14781 532 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P13-201ENST00000406019 ADGRF1Q5T601 910 aa7.14□□□□□ -1.27
HMGB1P13-201ENST00000406019 MBLAC2Q68D91 279 aa7.14□□□□□ -1.27
HMGB1P13-201ENST00000406019 NAT16Q8N8M0 369 aa7.14□□□□□ -1.27
HMGB1P13-201ENST00000406019 NUP43Q8NFH3 380 aa7.14□□□□□ -1.27
HMGB1P13-201ENST00000406019 NPLOC4Q8TAT6 608 aa7.14□□□□□ -1.27
HMGB1P13-201ENST00000406019 CCDC113Q9H0I3 377 aa7.14□□□□□ -1.27
HMGB1P13-201ENST00000406019 KLHL14Q9P2G3 628 aa7.14□□□□□ -1.27
HMGB1P13-201ENST00000406019 SUGT1Q9Y2Z0 365 aa7.14□□□□□ -1.27
HMGB1P13-201ENST00000406019 OR14I1A6ND48 311 aa7.13□□□□□ -1.27
HMGB1P13-201ENST00000406019 DDAH1O94760 285 aa7.13□□□□□ -1.27
HMGB1P13-201ENST00000406019 SCG5P05408 212 aa7.13□□□□□ -1.27
HMGB1P13-201ENST00000406019 YBX3P16989 372 aaKnown RBP eCLIP7.13□□□□□ -1.27
HMGB1P13-201ENST00000406019 GLDCP23378 1020 aa7.13□□□□□ -1.27
HMGB1P13-201ENST00000406019 TESK1Q15569 626 aa7.13□□□□□ -1.27
HMGB1P13-201ENST00000406019 POMZP3Q6PJE2 187 aa7.13□□□□□ -1.27
HMGB1P13-201ENST00000406019 ZNF605Q86T29 641 aa7.13□□□□□ -1.27
HMGB1P13-201ENST00000406019 KSR1Q8IVT5 923 aa7.13□□□□□ -1.27
HMGB1P13-201ENST00000406019 BTN2A2Q8WVV5 523 aa7.13□□□□□ -1.27
HMGB1P13-201ENST00000406019 C1orf159Q96HA4 380 aa7.13□□□□□ -1.27
HMGB1P13-201ENST00000406019 SLC26A8Q96RN1 970 aa7.13□□□□□ -1.27
HMGB1P13-201ENST00000406019 MTA3Q9BTC8 594 aa7.13□□□□□ -1.27
HMGB1P13-201ENST00000406019 CYP26B1Q9NR63 512 aa7.13□□□□□ -1.27
HMGB1P13-201ENST00000406019 TEX51A0A1B0GUA7 166 aa7.12□□□□□ -1.27
HMGB1P13-201ENST00000406019 ETV2O00321 342 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P13-201ENST00000406019 SRGAP3O43295 1099 aa7.12□□□□□ -1.27
HMGB1P13-201ENST00000406019 THBDP07204 575 aa7.12□□□□□ -1.27
HMGB1P13-201ENST00000406019 C1QTNF9P0C862 333 aa7.12□□□□□ -1.27
HMGB1P13-201ENST00000406019 PDE6BP35913 854 aa7.12□□□□□ -1.27
HMGB1P13-201ENST00000406019 CYP4F8P98187 520 aa7.12□□□□□ -1.27
HMGB1P13-201ENST00000406019 SCRN1Q12765 414 aa7.12□□□□□ -1.27
HMGB1P13-201ENST00000406019 C1QL4Q86Z23 238 aa7.12□□□□□ -1.27
HMGB1P13-201ENST00000406019 KREMEN2Q8NCW0 462 aa7.12□□□□□ -1.27
HMGB1P13-201ENST00000406019 FRS2Q8WU20 508 aa7.12□□□□□ -1.27
HMGB1P13-201ENST00000406019 GPATCH3Q96I76 525 aa7.12□□□□□ -1.27
HMGB1P13-201ENST00000406019 EPN3Q9H201 632 aa7.12□□□□□ -1.27
HMGB1P13-201ENST00000406019 MBD1Q9UIS9 605 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P13-201ENST00000406019 R3HCC1Q9Y3T6 440 aaKnown RBP7.12□□□□□ -1.27
HMGB1P13-201ENST00000406019 SEMA7AO75326 666 aa7.11□□□□□ -1.27
HMGB1P13-201ENST00000406019 TBC1D8O95759 1140 aa7.11□□□□□ -1.27
HMGB1P13-201ENST00000406019 L1CAMP32004 1257 aa7.11□□□□□ -1.27
HMGB1P13-201ENST00000406019 VIPR1P32241 457 aa7.11□□□□□ -1.27
HMGB1P13-201ENST00000406019 SF1Q15637 639 aaKnown RBP7.11□□□□□ -1.27
HMGB1P13-201ENST00000406019 PLEKHG4Q58EX7 1191 aa7.11□□□□□ -1.27
HMGB1P13-201ENST00000406019 DENND5AQ6IQ26 1287 aa7.11□□□□□ -1.27
HMGB1P13-201ENST00000406019 CRACR2BQ8N4Y2 399 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P13-201ENST00000406019 PPP1R16BQ96T49 567 aa7.11□□□□□ -1.27
HMGB1P13-201ENST00000406019 MMP19Q99542 508 aa7.11□□□□□ -1.27
HMGB1P13-201ENST00000406019 PDLIM7Q9NR12 457 aa7.11□□□□□ -1.27
HMGB1P13-201ENST00000406019 ST7Q9NRC1 585 aa7.11□□□□□ -1.27
HMGB1P13-201ENST00000406019 A0A1W2PQU0 124 aa7.1□□□□□ -1.27
HMGB1P13-201ENST00000406019 DBHP09172 617 aa7.1□□□□□ -1.27
HMGB1P13-201ENST00000406019 GLI4P10075 376 aa7.1□□□□□ -1.27
HMGB1P13-201ENST00000406019 PLS3P13797 630 aa7.1□□□□□ -1.27
HMGB1P13-201ENST00000406019 FBLN1P23142 703 aa7.1□□□□□ -1.27
HMGB1P13-201ENST00000406019 SEPHS1P49903 392 aa7.1□□□□□ -1.27
HMGB1P13-201ENST00000406019 DLG4P78352 724 aa7.1□□□□□ -1.27
HMGB1P13-201ENST00000406019 RPTNQ6XPR3 784 aa7.1□□□□□ -1.27
HMGB1P13-201ENST00000406019 EEPD1Q7L9B9 569 aa7.1□□□□□ -1.27
HMGB1P13-201ENST00000406019 CCDC103Q8IW40 242 aa7.1□□□□□ -1.27
HMGB1P13-201ENST00000406019 DPF3Q92784 378 aa7.1□□□□□ -1.27
HMGB1P13-201ENST00000406019 SLC38A3Q99624 504 aa7.1□□□□□ -1.27
HMGB1P13-201ENST00000406019 KRTAP9-9Q9BYP9 154 aa7.1□□□□□ -1.27
HMGB1P13-201ENST00000406019 KRTAP9-4Q9BYQ2 154 aa7.1□□□□□ -1.27
HMGB1P13-201ENST00000406019 BRINP2Q9C0B6 783 aa7.1□□□□□ -1.27
HMGB1P13-201ENST00000406019 CNTD2Q9H8S5 307 aa7.1□□□□□ -1.27
HMGB1P13-201ENST00000406019 GPRC5CQ9NQ84 441 aa7.1□□□□□ -1.27
HMGB1P13-201ENST00000406019 CLEC1BQ9P126 229 aa7.1□□□□□ -1.27
HMGB1P13-201ENST00000406019 TMEFF2Q9UIK5 374 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P13-201ENST00000406019 C7orf72A4D263 438 aa7.09□□□□□ -1.27
HMGB1P13-201ENST00000406019 DBX1A6NMT0 343 aa7.09□□□□□ -1.27
HMGB1P13-201ENST00000406019 NOP56O00567 594 aaKnown RBP7.09□□□□□ -1.27
HMGB1P13-201ENST00000406019 CLSTN1O94985 981 aa7.09□□□□□ -1.27
HMGB1P13-201ENST00000406019 GRIA2P42262 883 aa7.09□□□□□ -1.27
HMGB1P13-201ENST00000406019 GFRA1P56159 465 aa7.09□□□□□ -1.27
HMGB1P13-201ENST00000406019 INF2Q27J81 1249 aa7.09□□□□□ -1.27
HMGB1P13-201ENST00000406019 PLEKHN1Q494U1 663 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P13-201ENST00000406019 SV2CQ496J9 727 aa7.09□□□□□ -1.27
HMGB1P13-201ENST00000406019 CPNE8Q86YQ8 564 aa7.09□□□□□ -1.27
HMGB1P13-201ENST00000406019 JAMLQ86YT9 394 aa7.09□□□□□ -1.27
HMGB1P13-201ENST00000406019 LILRB2Q8N423 598 aa7.09□□□□□ -1.27
HMGB1P13-201ENST00000406019 NPHP3-ACAD11A0A0J9YXS1 232 aa7.08□□□□□ -1.28
HMGB1P13-201ENST00000406019 PAMP19021 973 aa7.08□□□□□ -1.28
HMGB1P13-201ENST00000406019 ARL4AP40617 200 aa7.08□□□□□ -1.28
HMGB1P13-201ENST00000406019 RASGRF1Q13972 1273 aa7.08□□□□□ -1.28
HMGB1P13-201ENST00000406019 PTPROQ16827 1216 aa7.08□□□□□ -1.28
HMGB1P13-201ENST00000406019 SLC35F1Q5T1Q4 408 aa7.08□□□□□ -1.28
HMGB1P13-201ENST00000406019 SH3TC2Q8TF17 1288 aa7.08□□□□□ -1.28
HMGB1P13-201ENST00000406019 SGPP1Q9BX95 441 aa7.08□□□□□ -1.28
HMGB1P13-201ENST00000406019 KANSL2Q9H9L4 492 aa7.08□□□□□ -1.28
HMGB1P13-201ENST00000406019 PLA2G2DQ9UNK4 145 aa7.08□□□□□ -1.28
HMGB1P13-201ENST00000406019 HCFC2Q9Y5Z7 792 aa7.08□□□□□ -1.28
HMGB1P13-201ENST00000406019 TRBV23OR9-2A0A075B6M9 112 aa7.07□□□□□ -1.28
HMGB1P13-201ENST00000406019 IRS4O14654 1257 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P13-201ENST00000406019 CYBBP04839 570 aa7.07□□□□□ -1.28
HMGB1P13-201ENST00000406019 MPOP05164 745 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms