RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 SLC23A3Q6PIS1 610 aa7.2□□□□□ -1.26
HMGB3P19-201ENST00000403971 CYP2R1Q6VVX0 501 aa7.2□□□□□ -1.26
HMGB3P19-201ENST00000403971 SLC7A14Q8TBB6 771 aa7.2□□□□□ -1.26
HMGB3P19-201ENST00000403971 DIO2Q92813 273 aa7.2□□□□□ -1.26
HMGB3P19-201ENST00000403971 JMJD8Q96S16 334 aa7.2□□□□□ -1.26
HMGB3P19-201ENST00000403971 FEZ1Q99689 392 aa7.2□□□□□ -1.26
HMGB3P19-201ENST00000403971 PHF20Q9BVI0 1012 aa7.2□□□□□ -1.26
HMGB3P19-201ENST00000403971 SLC52A2Q9HAB3 445 aa7.2□□□□□ -1.26
HMGB3P19-201ENST00000403971 NDOR1Q9UHB4 597 aa7.2□□□□□ -1.26
HMGB3P19-201ENST00000403971 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.2□□□□□ -1.26
HMGB3P19-201ENST00000403971 SBNO2Q9Y2G9 1366 aa7.2□□□□□ -1.26
HMGB3P19-201ENST00000403971 PLD2O14939 933 aa7.19□□□□□ -1.26
HMGB3P19-201ENST00000403971 MSCO60682 206 aa7.19□□□□□ -1.26
HMGB3P19-201ENST00000403971 TBC1D8O95759 1140 aa7.19□□□□□ -1.26
HMGB3P19-201ENST00000403971 DUSP4Q13115 394 aa7.19□□□□□ -1.26
HMGB3P19-201ENST00000403971 KIR3DS1Q14943 382 aa7.19□□□□□ -1.26
HMGB3P19-201ENST00000403971 E4F1Q66K89 784 aaPredicted RBP7.19□□□□□ -1.26
HMGB3P19-201ENST00000403971 CEP128Q6ZU80 1094 aa7.19□□□□□ -1.26
HMGB3P19-201ENST00000403971 RCBTB1Q8NDN9 531 aa7.19□□□□□ -1.26
HMGB3P19-201ENST00000403971 MMP19Q99542 508 aa7.19□□□□□ -1.26
HMGB3P19-201ENST00000403971 TNFRSF10DQ9UBN6 386 aa7.19□□□□□ -1.26
HMGB3P19-201ENST00000403971 SFMBT1Q9UHJ3 866 aa7.19□□□□□ -1.26
HMGB3P19-201ENST00000403971 NPFFR2Q9Y5X5 522 aa7.19□□□□□ -1.26
HMGB3P19-201ENST00000403971 CC2D2AQ9P2K1 1620 aa7.19□□□□□ -1.26
HMGB3P19-201ENST00000403971 ATAD2BQ9ULI0 1458 aa7.18□□□□□ -1.26
HMGB3P19-201ENST00000403971 C7orf72A4D263 438 aa7.18□□□□□ -1.26
HMGB3P19-201ENST00000403971 EFEMP2O95967 443 aa7.18□□□□□ -1.26
HMGB3P19-201ENST00000403971 TRHRP34981 398 aaPredicted RBP7.18□□□□□ -1.26
HMGB3P19-201ENST00000403971 LTBRP36941 435 aa7.18□□□□□ -1.26
HMGB3P19-201ENST00000403971 GYS2P54840 703 aa7.18□□□□□ -1.26
HMGB3P19-201ENST00000403971 PABPC4Q13310 644 aaKnown RBP eCLIP7.18□□□□□ -1.26
HMGB3P19-201ENST00000403971 ZNF792Q3KQV3 632 aa7.18□□□□□ -1.26
HMGB3P19-201ENST00000403971 DALRD3Q5D0E6 543 aaKnown RBP7.18□□□□□ -1.26
HMGB3P19-201ENST00000403971 HLA-DQA1Q5Y7H0 255 aa7.18□□□□□ -1.26
HMGB3P19-201ENST00000403971 STYK1Q6J9G0 422 aa7.18□□□□□ -1.26
HMGB3P19-201ENST00000403971 SLCO6A1Q86UG4 719 aa7.18□□□□□ -1.26
HMGB3P19-201ENST00000403971 ABI1Q8IZP0 508 aa7.18□□□□□ -1.26
HMGB3P19-201ENST00000403971 DCAF4Q8WV16 495 aa7.18□□□□□ -1.26
HMGB3P19-201ENST00000403971 PTPRN2Q92932 1015 aa7.18□□□□□ -1.26
HMGB3P19-201ENST00000403971 MRPL4Q9BYD3 311 aaKnown RBP7.18□□□□□ -1.26
HMGB3P19-201ENST00000403971 C19orf44Q9H6X5 657 aa7.18□□□□□ -1.26
HMGB3P19-201ENST00000403971 FBXL7Q9UJT9 491 aa7.18□□□□□ -1.26
HMGB3P19-201ENST00000403971 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P19-201ENST00000403971 NOTOA8MTQ0 251 aa7.17□□□□□ -1.26
HMGB3P19-201ENST00000403971 IRS4O14654 1257 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P19-201ENST00000403971 RTP1P59025 263 aa7.17□□□□□ -1.26
HMGB3P19-201ENST00000403971 GABREP78334 506 aa7.17□□□□□ -1.26
HMGB3P19-201ENST00000403971 KCNAB2Q13303 367 aa7.17□□□□□ -1.26
HMGB3P19-201ENST00000403971 TESK1Q15569 626 aa7.17□□□□□ -1.26
HMGB3P19-201ENST00000403971 HSF5Q4G112 596 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P19-201ENST00000403971 TIGD5Q53EQ6 642 aa7.17□□□□□ -1.26
HMGB3P19-201ENST00000403971 ARTNQ5T4W7 220 aa7.17□□□□□ -1.26
HMGB3P19-201ENST00000403971 BRAPQ7Z569 592 aa7.17□□□□□ -1.26
HMGB3P19-201ENST00000403971 FGD2Q7Z6J4 655 aa7.17□□□□□ -1.26
HMGB3P19-201ENST00000403971 JAMLQ86YT9 394 aa7.17□□□□□ -1.26
HMGB3P19-201ENST00000403971 DHX37Q8IY37 1157 aaKnown RBP7.17□□□□□ -1.26
HMGB3P19-201ENST00000403971 SYNPOQ8N3V7 929 aa7.17□□□□□ -1.26
HMGB3P19-201ENST00000403971 AGBL5Q8NDL9 886 aa7.17□□□□□ -1.26
HMGB3P19-201ENST00000403971 SP110Q9HB58 689 aa7.17□□□□□ -1.26
HMGB3P19-201ENST00000403971 HMGXB3Q12766 1538 aa7.17□□□□□ -1.26
HMGB3P19-201ENST00000403971 TRBV23OR9-2A0A075B6M9 112 aa7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 PPP1R11O60927 126 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 RASGRP1O95267 797 aa7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 SDSP20132 328 aa7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 KIR2DL1P43626 348 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 KIR2DL2P43627 348 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 GALK1P51570 392 aa7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 FNDC3BQ53EP0 1204 aaKnown RBP7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 TRIM61Q5EBN2 209 aa7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 MAMDC2Q7Z304 686 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 ANKS4BQ8N8V4 417 aa7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 GSTCDQ8NEC7 633 aa7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 PDZD8Q8NEN9 1154 aa7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 DPF3Q92784 378 aa7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 SCLYQ96I15 445 aa7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 PLCD4Q9BRC7 762 aa7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 RC3H2Q9HBD1 1191 aaKnown RBP7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 TRIM39Q9HCM9 518 aa7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 GPR27Q9NS67 375 aa7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 BTG4Q9NY30 223 aa7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 GULP1Q9UBP9 304 aa7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 PCDHA9Q9Y5H5 950 aa7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 PCDHA2Q9Y5H9 948 aa7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 NCAPD3P42695 1498 aa7.16□□□□□ -1.26
HMGB3P19-201ENST00000403971 A0A1W2PQ45 241 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P19-201ENST00000403971 A0A1W2PQY0 241 aa7.15□□□□□ -1.26
HMGB3P19-201ENST00000403971 PSPNO60542 156 aa7.15□□□□□ -1.26
HMGB3P19-201ENST00000403971 DNAJC8O75937 253 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P19-201ENST00000403971 CLSTN1O94985 981 aa7.15□□□□□ -1.26
HMGB3P19-201ENST00000403971 GDNFP39905 211 aa7.15□□□□□ -1.26
HMGB3P19-201ENST00000403971 BCL6P41182 706 aa7.15□□□□□ -1.26
HMGB3P19-201ENST00000403971 GP2P55259 537 aaKnown RBP7.15□□□□□ -1.26
HMGB3P19-201ENST00000403971 SLC14A2Q15849 920 aa7.15□□□□□ -1.26
HMGB3P19-201ENST00000403971 IQCEQ6IPM2 695 aa7.15□□□□□ -1.26
HMGB3P19-201ENST00000403971 NINJ1Q92982 152 aa7.15□□□□□ -1.26
HMGB3P19-201ENST00000403971 IMPACTQ9P2X3 320 aa7.15□□□□□ -1.26
HMGB3P19-201ENST00000403971 PPARGC1AQ9UBK2 798 aaKnown RBP7.15□□□□□ -1.26
HMGB3P19-201ENST00000403971 CTNND2Q9UQB3 1225 aa7.15□□□□□ -1.26
HMGB3P19-201ENST00000403971 PCDHA8Q9Y5H6 950 aa7.15□□□□□ -1.26
HMGB3P19-201ENST00000403971 TOP2AP11388 1531 aaKnown RBP7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms