RNA–Protein interactions for RNA: ENST00000403538.1

TPT1P4-201, Transcript of tumor protein, translationally-controlled 1 pseudogene 4, humanhuman

BASIC

Gene TPT1P4, Length 519 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1P4-201ENST00000403538 MYL5Q02045 173 aa10.53□□□□□ -0.72
TPT1P4-201ENST00000403538 CCDC93Q567U6 631 aa10.53□□□□□ -0.72
TPT1P4-201ENST00000403538 CCDC82Q8N4S0 544 aa10.53□□□□□ -0.72
TPT1P4-201ENST00000403538 DCAF4Q8WV16 495 aa10.53□□□□□ -0.72
TPT1P4-201ENST00000403538 SMARCE1Q969G3 411 aa10.53□□□□□ -0.72
TPT1P4-201ENST00000403538 CEP95Q96GE4 821 aa10.53□□□□□ -0.72
TPT1P4-201ENST00000403538 SPTLC3Q9NUV7 552 aa10.53□□□□□ -0.72
TPT1P4-201ENST00000403538 RMND1Q9NWS8 449 aa10.53□□□□□ -0.72
TPT1P4-201ENST00000403538 HDAC9Q9UKV0 1011 aa10.53□□□□□ -0.72
TPT1P4-201ENST00000403538 ZNF646O15015 1829 aaPredicted RBP10.53□□□□□ -0.72
TPT1P4-201ENST00000403538 PNMA6FA0A0J9YX94 578 aa10.52□□□□□ -0.73
TPT1P4-201ENST00000403538 STXBP3O00186 592 aa10.52□□□□□ -0.73
TPT1P4-201ENST00000403538 PPFIA3O75145 1194 aa10.52□□□□□ -0.73
TPT1P4-201ENST00000403538 PDHBP11177 359 aa10.52□□□□□ -0.73
TPT1P4-201ENST00000403538 GCFC2P16383 781 aaKnown RBP10.52□□□□□ -0.73
TPT1P4-201ENST00000403538 MORC3Q14149 939 aa10.52□□□□□ -0.73
TPT1P4-201ENST00000403538 NONOQ15233 471 aaKnown RBP eCLIP10.52□□□□□ -0.73
TPT1P4-201ENST00000403538 LONRF3Q496Y0 759 aa10.52□□□□□ -0.73
TPT1P4-201ENST00000403538 BRICD5Q6PL45 260 aa10.52□□□□□ -0.73
TPT1P4-201ENST00000403538 DTHD1Q6ZMT9 781 aa10.52□□□□□ -0.73
TPT1P4-201ENST00000403538 TMEM179Q6ZVK1 233 aa10.52□□□□□ -0.73
TPT1P4-201ENST00000403538 NPAS3Q8IXF0 933 aa10.52□□□□□ -0.73
TPT1P4-201ENST00000403538 C4orf32Q8N8J7 132 aa10.52□□□□□ -0.73
TPT1P4-201ENST00000403538 GMCL1P1Q8NEA9 526 aa10.52□□□□□ -0.73
TPT1P4-201ENST00000403538 AGBL3Q8NEM8 1001 aa10.52□□□□□ -0.73
TPT1P4-201ENST00000403538 RAB34Q9BZG1 259 aa10.52□□□□□ -0.73
TPT1P4-201ENST00000403538 CSRNP2Q9H175 543 aa10.52□□□□□ -0.73
TPT1P4-201ENST00000403538 TMOD2Q9NZR1 351 aa10.52□□□□□ -0.73
TPT1P4-201ENST00000403538 JAG2Q9Y219 1238 aa10.52□□□□□ -0.73
TPT1P4-201ENST00000403538 PCDHA5Q9Y5H7 936 aa10.52□□□□□ -0.73
TPT1P4-201ENST00000403538 SMIM22K7EJ46 135 aa10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 POLR2DO15514 142 aaKnown RBP10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 CYTH3O43739 400 aa10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 VIL1P09327 827 aaKnown RBP10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 SHMT1P34896 483 aa10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 MRPL12P52815 198 aaKnown RBP10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 ZNF543Q08ER8 600 aa10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 PDIA5Q14554 519 aa10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 MSS51Q4VC12 460 aa10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 WWC2Q6AWC2 1192 aa10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 FOXR2Q6PJQ5 311 aa10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 MOXD1Q6UVY6 613 aa10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 PIK3AP1Q6ZUJ8 805 aa10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 C11orf57Q6ZUT1 292 aaPredicted RBP10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 CMTR1Q8N1G2 835 aaKnown RBP10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 STAG2Q8N3U4 1231 aa10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 ZSCAN1Q8NBB4 408 aa10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 CCDC150Q8NCX0 1101 aa10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 KIAA1524Q8TCG1 905 aa10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 SHISA4Q96DD7 197 aa10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 CLIC6Q96NY7 704 aa10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 GPR101Q96P66 508 aaPredicted RBP10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 CTAGE1Q96RT6 745 aa10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 LRRC27Q9C0I9 530 aa10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 CLIP2Q9UDT6 1046 aa10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 SAP30BPQ9UHR5 308 aaKnown RBP10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 PCDHA6Q9UN73 950 aa10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 SLC27A5Q9Y2P5 690 aa10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 PCDHA8Q9Y5H6 950 aa10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.51□□□□□ -0.73
TPT1P4-201ENST00000403538 MYH4Q9Y623 1939 aa10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 UBE2Q2LH0YL09 131 aa10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 J3QL48 77 aa10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 KIF2AO00139 706 aaPredicted RBP10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 CCP110O43303 1012 aa10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 PLA2G6O60733 806 aa10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 NAPAP54920 295 aa10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 AMPD3Q01432 767 aa10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 KCNB1Q14721 858 aa10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 NCAPHQ15003 741 aa10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 DPCR1Q3MIW9 517 aa10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 PPP4R3AQ6IN85 833 aa10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 NEK8Q86SG6 692 aa10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 FAM83AQ86UY5 434 aa10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 REXO1Q8N1G1 1221 aaKnown RBP10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 SLC44A5Q8NCS7 719 aa10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 GMCL1Q96IK5 515 aa10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 MRGPRX2Q96LB1 330 aa10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 PRIMPOLQ96LW4 560 aa10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 TRIM34Q9BYJ4 488 aa10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 RIC8AQ9NPQ8 531 aa10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 NXF1Q9UBU9 619 aaKnown RBP10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 RGS17Q9UGC6 210 aaPredicted RBP10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 PNMA2Q9UL42 364 aa10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 SCN9AQ15858 1988 aa10.5□□□□□ -0.73
TPT1P4-201ENST00000403538 SMCO2A6NFE2 343 aa10.49□□□□□ -0.73
TPT1P4-201ENST00000403538 ZBTB5O15062 677 aa10.49□□□□□ -0.73
TPT1P4-201ENST00000403538 FOSP01100 380 aaPredicted RBP10.49□□□□□ -0.73
TPT1P4-201ENST00000403538 USP11P51784 963 aa10.49□□□□□ -0.73
TPT1P4-201ENST00000403538 SPAG1Q07617 926 aa10.49□□□□□ -0.73
TPT1P4-201ENST00000403538 NOLC1Q14978 699 aaKnown RBP eCLIP10.49□□□□□ -0.73
TPT1P4-201ENST00000403538 CERKLQ49MI3 558 aaPredicted RBP10.49□□□□□ -0.73
TPT1P4-201ENST00000403538 COBLL1Q53SF7 1204 aa10.49□□□□□ -0.73
TPT1P4-201ENST00000403538 CNNM4Q6P4Q7 775 aa10.49□□□□□ -0.73
TPT1P4-201ENST00000403538 RSBN1LQ6PCB5 846 aaPredicted RBP10.49□□□□□ -0.73
TPT1P4-201ENST00000403538 BTNL9Q6UXG8 535 aa10.49□□□□□ -0.73
TPT1P4-201ENST00000403538 HEATR3Q7Z4Q2 680 aa10.49□□□□□ -0.73
TPT1P4-201ENST00000403538 DRC7Q8IY82 874 aa10.49□□□□□ -0.73
TPT1P4-201ENST00000403538 OGFOD1Q8N543 542 aa10.49□□□□□ -0.73
TPT1P4-201ENST00000403538 CCDC112Q8NEF3 446 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms