RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 P2RX5Q93086 422 aa8.58□□□□□ -1.04
HDAC9-201ENST00000401921 TSG101Q99816 390 aa8.58□□□□□ -1.04
HDAC9-201ENST00000401921 SH3GLB2Q9NR46 395 aa8.58□□□□□ -1.04
HDAC9-201ENST00000401921 USP40Q9NVE5 1235 aa8.58□□□□□ -1.04
HDAC9-201ENST00000401921 LIMA1Q9UHB6 759 aaKnown RBP8.58□□□□□ -1.04
HDAC9-201ENST00000401921 MYO6Q9UM54 1294 aa8.58□□□□□ -1.04
HDAC9-201ENST00000401921 CNTNAP4Q9C0A0 1308 aa8.58□□□□□ -1.04
HDAC9-201ENST00000401921 RNF225M0QZC1 329 aaPredicted RBP8.58□□□□□ -1.04
HDAC9-201ENST00000401921 TRAF5O00463 557 aa8.58□□□□□ -1.04
HDAC9-201ENST00000401921 USO1O60763 962 aaKnown RBP8.58□□□□□ -1.04
HDAC9-201ENST00000401921 SRGAP2O75044 1071 aa8.58□□□□□ -1.04
HDAC9-201ENST00000401921 EIF3JO75822 258 aaKnown RBP8.58□□□□□ -1.04
HDAC9-201ENST00000401921 HLA-DOAP06340 250 aa8.58□□□□□ -1.04
HDAC9-201ENST00000401921 LONRF2Q1L5Z9 754 aa8.58□□□□□ -1.04
HDAC9-201ENST00000401921 GALNT17Q6IS24 598 aa8.58□□□□□ -1.04
HDAC9-201ENST00000401921 CC2D1AQ6P1N0 951 aaPredicted RBP8.58□□□□□ -1.04
HDAC9-201ENST00000401921 C2CD5Q86YS7 1000 aa8.58□□□□□ -1.04
HDAC9-201ENST00000401921 ADSSL1Q8N142 457 aa8.58□□□□□ -1.04
HDAC9-201ENST00000401921 ANKRD13CQ8N6S4 541 aa8.58□□□□□ -1.04
HDAC9-201ENST00000401921 GJA10Q969M2 543 aa8.58□□□□□ -1.04
HDAC9-201ENST00000401921 NLRC4Q9NPP4 1024 aa8.58□□□□□ -1.04
HDAC9-201ENST00000401921 AGPAT5Q9NUQ2 364 aa8.58□□□□□ -1.04
HDAC9-201ENST00000401921 FAM196BA6NMK8 535 aa8.57□□□□□ -1.04
HDAC9-201ENST00000401921 ZMYND10O75800 440 aa8.57□□□□□ -1.04
HDAC9-201ENST00000401921 KLK7P49862 253 aa8.57□□□□□ -1.04
HDAC9-201ENST00000401921 CACNB1Q02641 598 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-201ENST00000401921 ANKRD40Q6AI12 368 aa8.57□□□□□ -1.04
HDAC9-201ENST00000401921 PRR5LQ6MZQ0 368 aa8.57□□□□□ -1.04
HDAC9-201ENST00000401921 BANK1Q8NDB2 785 aa8.57□□□□□ -1.04
HDAC9-201ENST00000401921 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.57□□□□□ -1.04
HDAC9-201ENST00000401921 MXD3Q9BW11 206 aa8.57□□□□□ -1.04
HDAC9-201ENST00000401921 VPS18Q9P253 973 aa8.57□□□□□ -1.04
HDAC9-201ENST00000401921 HDAC6Q9UBN7 1215 aa8.57□□□□□ -1.04
HDAC9-201ENST00000401921 FANCGO15287 622 aa8.57□□□□□ -1.04
HDAC9-201ENST00000401921 TDP2O95551 362 aa8.57□□□□□ -1.04
HDAC9-201ENST00000401921 CCNE1P24864 410 aa8.57□□□□□ -1.04
HDAC9-201ENST00000401921 EEF1GP26641 437 aaKnown RBP8.57□□□□□ -1.04
HDAC9-201ENST00000401921 CACNB3P54284 484 aa8.57□□□□□ -1.04
HDAC9-201ENST00000401921 RC3H1Q5TC82 1133 aaKnown RBP8.57□□□□□ -1.04
HDAC9-201ENST00000401921 GPATCH11Q8N954 259 aa8.57□□□□□ -1.04
HDAC9-201ENST00000401921 NEK11Q8NG66 645 aa8.57□□□□□ -1.04
HDAC9-201ENST00000401921 NOC3LQ8WTT2 800 aaKnown RBP8.57□□□□□ -1.04
HDAC9-201ENST00000401921 CRACR2AQ9BSW2 395 aa8.57□□□□□ -1.04
HDAC9-201ENST00000401921 ACBD3Q9H3P7 528 aa8.57□□□□□ -1.04
HDAC9-201ENST00000401921 ATF5Q9Y2D1 282 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-201ENST00000401921 FHOD1Q9Y613 1164 aa8.57□□□□□ -1.04
HDAC9-201ENST00000401921 MYH14Q7Z406 1995 aaKnown RBP8.57□□□□□ -1.04
HDAC9-201ENST00000401921 SLIT2O94813 1529 aa8.57□□□□□ -1.04
HDAC9-201ENST00000401921 C4AP0C0L4 1744 aa8.57□□□□□ -1.04
HDAC9-201ENST00000401921 C4BP0C0L5 1744 aa8.57□□□□□ -1.04
HDAC9-201ENST00000401921 MYH13Q9UKX3 1938 aa8.57□□□□□ -1.04
HDAC9-201ENST00000401921 LGALS16A8MUM7 142 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 FGFR1OPO95684 399 aaKnown RBP8.56□□□□□ -1.04
HDAC9-201ENST00000401921 FGRP09769 529 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 ZNF76P36508 570 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 RRAGAQ7L523 313 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 NEDD1Q8NHV4 660 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 TRIM9Q9C026 710 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 GBP3Q9H0R5 595 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 RASSF4Q9H2L5 321 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 FLT1P17948 1338 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 FAM170AA1A519 330 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 POTEB2H3BUK9 544 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 MRPL12P52815 198 aaKnown RBP8.56□□□□□ -1.04
HDAC9-201ENST00000401921 TTBK2Q6IQ55 1244 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 TRMT1LQ7Z2T5 733 aaKnown RBP8.56□□□□□ -1.04
HDAC9-201ENST00000401921 KIAA0825Q8IV33 1275 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 TBC1D22AQ8WUA7 517 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 LARP4BQ92615 738 aaKnown RBP8.56□□□□□ -1.04
HDAC9-201ENST00000401921 DHTKD1Q96HY7 919 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-201ENST00000401921 HAUS4Q9H6D7 363 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 SAR1BQ9Y6B6 198 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 NID2Q14112 1375 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 PALM3A6NDB9 673 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-201ENST00000401921 LAD1O00515 517 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 SLURP2P0DP57 97 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 AKR1B1P15121 316 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 TM4SF1P30408 202 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 PLA2G4AP47712 749 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 HNRNPH2P55795 449 aaKnown RBP8.56□□□□□ -1.04
HDAC9-201ENST00000401921 NAALADL2Q58DX5 795 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 TCERG1LQ5VWI1 586 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 KRT26Q7Z3Y9 468 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 MYCBPQ99417 103 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-201ENST00000401921 CCSER1Q9C0I3 900 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 THAP9Q9H5L6 903 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 SUGCTQ9HAC7 445 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 PDE11AQ9HCR9 933 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 PCDHA12Q9UN75 941 aa8.56□□□□□ -1.04
HDAC9-201ENST00000401921 SNAP25P60880 206 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 MRPS25P82663 173 aaKnown RBP8.55□□□□□ -1.04
HDAC9-201ENST00000401921 USH1GQ495M9 461 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 HERC4Q5GLZ8 1057 aaPredicted RBP8.55□□□□□ -1.04
HDAC9-201ENST00000401921 APTXQ7Z2E3 356 aaKnown RBP8.55□□□□□ -1.04
HDAC9-201ENST00000401921 HDXQ7Z353 690 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 KIFC2Q96AC6 838 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 AK8Q96MA6 479 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 NUP58Q9BVL2 599 aa8.55□□□□□ -1.04
HDAC9-201ENST00000401921 RTFDC1Q9BY42 306 aaPredicted RBP8.55□□□□□ -1.04
HDAC9-201ENST00000401921 PLEKHA4Q9H4M7 779 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms