RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 DEFB128Q7Z7B8 93 aa17.24■□□□□ 0.35
VAMP1-203ENST00000400911 FSD1Q9BTV5 496 aa17.24■□□□□ 0.35
VAMP1-203ENST00000400911 WDR11Q9BZH6 1224 aa17.24■□□□□ 0.35
VAMP1-203ENST00000400911 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.24■□□□□ 0.35
VAMP1-203ENST00000400911 RFXAPO00287 272 aa17.23■□□□□ 0.35
VAMP1-203ENST00000400911 ICAM1P05362 532 aa17.23■□□□□ 0.35
VAMP1-203ENST00000400911 MYL3P08590 195 aa17.23■□□□□ 0.35
VAMP1-203ENST00000400911 SUPT20HL2P0C7V6 817 aa17.23■□□□□ 0.35
VAMP1-203ENST00000400911 BMP1P13497 986 aa17.23■□□□□ 0.35
VAMP1-203ENST00000400911 SLC16A2P36021 539 aa17.23■□□□□ 0.35
VAMP1-203ENST00000400911 TFF2Q03403 129 aa17.23■□□□□ 0.35
VAMP1-203ENST00000400911 TTBK2Q6IQ55 1244 aa17.23■□□□□ 0.35
VAMP1-203ENST00000400911 ERC2O15083 957 aa17.22■□□□□ 0.35
VAMP1-203ENST00000400911 FOXP2O15409 715 aa17.22■□□□□ 0.35
VAMP1-203ENST00000400911 RANBP6O60518 1105 aaKnown RBP17.22■□□□□ 0.35
VAMP1-203ENST00000400911 PURAQ00577 322 aaKnown RBP17.22■□□□□ 0.35
VAMP1-203ENST00000400911 SKIV2LQ15477 1246 aaKnown RBP17.22■□□□□ 0.35
VAMP1-203ENST00000400911 CCDC96Q2M329 555 aa17.22■□□□□ 0.35
VAMP1-203ENST00000400911 TMEM67Q5HYA8 995 aa17.22■□□□□ 0.35
VAMP1-203ENST00000400911 PI4K2BQ8TCG2 481 aa17.22■□□□□ 0.35
VAMP1-203ENST00000400911 OTUD7AQ8TE49 926 aaPredicted RBP17.22■□□□□ 0.35
VAMP1-203ENST00000400911 PPP1R13LQ8WUF5 828 aa17.22■□□□□ 0.35
VAMP1-203ENST00000400911 RANBP17Q9H2T7 1088 aaKnown RBP17.22■□□□□ 0.35
VAMP1-203ENST00000400911 CERS4Q9HA82 394 aa17.22■□□□□ 0.35
VAMP1-203ENST00000400911 POLR3EQ9NVU0 708 aa17.22■□□□□ 0.35
VAMP1-203ENST00000400911 ADD3Q9UEY8 706 aaKnown RBP17.22■□□□□ 0.35
VAMP1-203ENST00000400911 TNKSO95271 1327 aa17.21■□□□□ 0.35
VAMP1-203ENST00000400911 TTC41PQ6P2S7 1318 aa17.21■□□□□ 0.35
VAMP1-203ENST00000400911 PTPDC1A2A3K4 754 aa17.21■□□□□ 0.35
VAMP1-203ENST00000400911 NFIBO00712 420 aa17.21■□□□□ 0.35
VAMP1-203ENST00000400911 CA3P07451 260 aa17.21■□□□□ 0.35
VAMP1-203ENST00000400911 PFKMP08237 780 aa17.21■□□□□ 0.35
VAMP1-203ENST00000400911 CPT1AP50416 773 aa17.21■□□□□ 0.35
VAMP1-203ENST00000400911 ALDH5A1P51649 535 aaPredicted RBP17.21■□□□□ 0.35
VAMP1-203ENST00000400911 DCAF4Q8WV16 495 aa17.21■□□□□ 0.35
VAMP1-203ENST00000400911 GPHNQ9NQX3 736 aaPredicted RBP17.21■□□□□ 0.35
VAMP1-203ENST00000400911 NOVP48745 357 aa17.2■□□□□ 0.34
VAMP1-203ENST00000400911 KCNQ1P51787 676 aa17.2■□□□□ 0.34
VAMP1-203ENST00000400911 NBPF20Q3BBV1 942 aa17.2■□□□□ 0.34
VAMP1-203ENST00000400911 FAM47CQ5HY64 1035 aa17.2■□□□□ 0.34
VAMP1-203ENST00000400911 SYDE2Q5VT97 1194 aa17.2■□□□□ 0.34
VAMP1-203ENST00000400911 OR6J1Q8NGC5 347 aa17.2■□□□□ 0.34
VAMP1-203ENST00000400911 MTG1Q9BT17 334 aaPredicted RBP17.2■□□□□ 0.34
VAMP1-203ENST00000400911 MTCH2Q9Y6C9 303 aa17.2■□□□□ 0.34
VAMP1-203ENST00000400911 RBM47A0AV96 593 aaKnown RBP17.19■□□□□ 0.34
VAMP1-203ENST00000400911 EPOPA6NHQ4 379 aa17.19■□□□□ 0.34
VAMP1-203ENST00000400911 CALML3P27482 149 aa17.19■□□□□ 0.34
VAMP1-203ENST00000400911 VPS53Q5VIR6 699 aa17.19■□□□□ 0.34
VAMP1-203ENST00000400911 DIEXFQ68CQ4 756 aaKnown RBP17.19■□□□□ 0.34
VAMP1-203ENST00000400911 BTNL9Q6UXG8 535 aa17.19■□□□□ 0.34
VAMP1-203ENST00000400911 CLEC4DQ8WXI8 215 aa17.19■□□□□ 0.34
VAMP1-203ENST00000400911 GPCPD1Q9NPB8 672 aa17.19■□□□□ 0.34
VAMP1-203ENST00000400911 FRMPD2Q68DX3 1309 aaPredicted RBP17.19■□□□□ 0.34
VAMP1-203ENST00000400911 GTPBP6O43824 516 aaPredicted RBP17.18■□□□□ 0.34
VAMP1-203ENST00000400911 ACTN1P12814 892 aa17.18■□□□□ 0.34
VAMP1-203ENST00000400911 POU3F3P20264 500 aaPredicted RBP17.18■□□□□ 0.34
VAMP1-203ENST00000400911 AAK1Q2M2I8 961 aa17.18■□□□□ 0.34
VAMP1-203ENST00000400911 KRT40Q6A162 431 aa17.18■□□□□ 0.34
VAMP1-203ENST00000400911 SLC30A10Q6XR72 485 aa17.18■□□□□ 0.34
VAMP1-203ENST00000400911 RETREG2Q8NC44 543 aa17.18■□□□□ 0.34
VAMP1-203ENST00000400911 FTOQ9C0B1 505 aaKnown RBP eCLIP17.18■□□□□ 0.34
VAMP1-203ENST00000400911 ANAPC4Q9UJX5 808 aa17.18■□□□□ 0.34
VAMP1-203ENST00000400911 LOC102724159A0A0B4J2E5 919 aa17.17■□□□□ 0.34
VAMP1-203ENST00000400911 ARHGEF15O94989 841 aa17.17■□□□□ 0.34
VAMP1-203ENST00000400911 IQCF3P0C7M6 154 aa17.17■□□□□ 0.34
VAMP1-203ENST00000400911 RFC2P35250 354 aa17.17■□□□□ 0.34
VAMP1-203ENST00000400911 PDE4DQ08499 809 aa17.17■□□□□ 0.34
VAMP1-203ENST00000400911 PWP2Q15269 919 aaKnown RBP17.17■□□□□ 0.34
VAMP1-203ENST00000400911 BRDTQ58F21 947 aaPredicted RBP17.17■□□□□ 0.34
VAMP1-203ENST00000400911 RNF207Q6ZRF8 634 aa17.17■□□□□ 0.34
VAMP1-203ENST00000400911 PHOSPHO2Q8TCD6 241 aa17.17■□□□□ 0.34
VAMP1-203ENST00000400911 ARNTL2Q8WYA1 636 aa17.17■□□□□ 0.34
VAMP1-203ENST00000400911 COPS5Q92905 334 aa17.17■□□□□ 0.34
VAMP1-203ENST00000400911 TMEM47Q9BQJ4 181 aa17.17■□□□□ 0.34
VAMP1-203ENST00000400911 TOMM22Q9NS69 142 aa17.17■□□□□ 0.34
VAMP1-203ENST00000400911 MYH7P12883 1935 aa17.16■□□□□ 0.34
VAMP1-203ENST00000400911 A6NJR5 290 aa17.16■□□□□ 0.34
VAMP1-203ENST00000400911 ORC4O43929 436 aa17.16■□□□□ 0.34
VAMP1-203ENST00000400911 FGRP09769 529 aa17.16■□□□□ 0.34
VAMP1-203ENST00000400911 TOP1P11387 765 aaKnown RBP17.16■□□□□ 0.34
VAMP1-203ENST00000400911 MX1P20591 662 aa17.16■□□□□ 0.34
VAMP1-203ENST00000400911 TAP1Q03518 808 aa17.16■□□□□ 0.34
VAMP1-203ENST00000400911 PPP2R5BQ15173 497 aa17.16■□□□□ 0.34
VAMP1-203ENST00000400911 RRP12Q5JTH9 1297 aaKnown RBP17.16■□□□□ 0.34
VAMP1-203ENST00000400911 NFRKBQ6P4R8 1299 aa17.16■□□□□ 0.34
VAMP1-203ENST00000400911 SLC9A7Q96T83 725 aa17.16■□□□□ 0.34
VAMP1-203ENST00000400911 MCM3APO60318 1980 aa17.15■□□□□ 0.34
VAMP1-203ENST00000400911 PITPNM1O00562 1244 aa17.15■□□□□ 0.34
VAMP1-203ENST00000400911 NKRFO15226 690 aaKnown RBP eCLIP17.15■□□□□ 0.34
VAMP1-203ENST00000400911 KPNA6O60684 536 aa17.15■□□□□ 0.34
VAMP1-203ENST00000400911 PLA2G5P39877 138 aa17.15■□□□□ 0.34
VAMP1-203ENST00000400911 CHMP4BP1P59074 171 aa17.15■□□□□ 0.34
VAMP1-203ENST00000400911 RPS6P62753 249 aaKnown RBP17.15■□□□□ 0.34
VAMP1-203ENST00000400911 HERC6Q8IVU3 1022 aa17.15■□□□□ 0.34
VAMP1-203ENST00000400911 SCFD2Q8WU76 684 aa17.15■□□□□ 0.34
VAMP1-203ENST00000400911 C1QTNF1Q9BXJ1 281 aa17.15■□□□□ 0.34
VAMP1-203ENST00000400911 PCDHB15Q9Y5E8 787 aa17.15■□□□□ 0.34
VAMP1-203ENST00000400911 RAD50Q92878 1312 aa17.15■□□□□ 0.34
VAMP1-203ENST00000400911 KIF28PB7ZC32 967 aa17.14■□□□□ 0.33
VAMP1-203ENST00000400911 FGAP02671 866 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms