RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 ATP8A2Q9NTI2 1148 aa15.05■□□□□ -0
VAPA-202ENST00000400000 LOC102724428A0A0B4J2F2 783 aa15.04■□□□□ -0
VAPA-202ENST00000400000 HNRNPDLO14979 420 aaKnown RBP15.04■□□□□ -0
VAPA-202ENST00000400000 HOXA13P31271 388 aaPredicted RBP15.04■□□□□ -0
VAPA-202ENST00000400000 CXCR5P32302 372 aa15.04■□□□□ -0
VAPA-202ENST00000400000 PPP1R2P41236 205 aa15.04■□□□□ -0
VAPA-202ENST00000400000 SIK1P57059 783 aa15.04■□□□□ -0
VAPA-202ENST00000400000 MYL7Q01449 175 aa15.04■□□□□ -0
VAPA-202ENST00000400000 BFSP1Q12934 665 aa15.04■□□□□ -0
VAPA-202ENST00000400000 ODR4Q5SWX8 454 aa15.04■□□□□ -0
VAPA-202ENST00000400000 ZNF804BA4D1E1 1349 aa15.04■□□□□ -0
VAPA-202ENST00000400000 OPHN1O60890 802 aa15.04■□□□□ -0
VAPA-202ENST00000400000 OSBPP22059 807 aa15.04■□□□□ -0
VAPA-202ENST00000400000 PAK2Q13177 524 aa15.04■□□□□ -0
VAPA-202ENST00000400000 PTGDRQ13258 359 aa15.04■□□□□ -0
VAPA-202ENST00000400000 KCTD16Q68DU8 428 aa15.04■□□□□ -0
VAPA-202ENST00000400000 ERO1AQ96HE7 468 aa15.04■□□□□ -0
VAPA-202ENST00000400000 FTOQ9C0B1 505 aaKnown RBP eCLIP15.04■□□□□ -08e-8■□□□□ 8.7
VAPA-202ENST00000400000 LZTS2Q9BRK4 669 aa15.04■□□□□ -0
VAPA-202ENST00000400000 KDM3AQ9Y4C1 1321 aa15.04■□□□□ -0
VAPA-202ENST00000400000 CDO1Q16878 200 aa15.04■□□□□ -0
VAPA-202ENST00000400000 TMTC1Q8IUR5 882 aa15.04■□□□□ -0
VAPA-202ENST00000400000 OGFRQ9NZT2 677 aa15.04■□□□□ -0
VAPA-202ENST00000400000 TPCN1Q9ULQ1 816 aa15.04■□□□□ -0
VAPA-202ENST00000400000 GOLGA8IPA6NC78 632 aa15.04■□□□□ -0
VAPA-202ENST00000400000 GOLGA8JA6NMD2 632 aa15.04■□□□□ -0
VAPA-202ENST00000400000 C21orf2O43822 256 aa15.04■□□□□ -0
VAPA-202ENST00000400000 PDE6AP16499 860 aa15.04■□□□□ -0
VAPA-202ENST00000400000 DYNLL2Q96FJ2 89 aa15.04■□□□□ -0
VAPA-202ENST00000400000 CFAP36Q96G28 342 aa15.04■□□□□ -0
VAPA-202ENST00000400000 GLT8D2Q9H1C3 349 aa15.04■□□□□ -0
VAPA-202ENST00000400000 PRAG1Q86YV5 1406 aa15.04■□□□□ -0
VAPA-202ENST00000400000 RPN1P04843 607 aaKnown RBP15.03■□□□□ -0
VAPA-202ENST00000400000 OR52Z1P0C646 297 aa15.03■□□□□ -0
VAPA-202ENST00000400000 ACTN1P12814 892 aa15.03■□□□□ -0
VAPA-202ENST00000400000 SERPINB6P35237 376 aa15.03■□□□□ -0
VAPA-202ENST00000400000 NDUFA8P51970 172 aa15.03■□□□□ -0
VAPA-202ENST00000400000 NEK8Q86SG6 692 aa15.03■□□□□ -0
VAPA-202ENST00000400000 SERPINB2P05120 415 aa15.03■□□□□ -0
VAPA-202ENST00000400000 YWHAEP62258 255 aaKnown RBP15.03■□□□□ -0
VAPA-202ENST00000400000 NT5C3AQ9H0P0 336 aa15.03■□□□□ -0
VAPA-202ENST00000400000 FGAP02671 866 aa15.03■□□□□ -0
VAPA-202ENST00000400000 ZBTB41Q5SVQ8 909 aa15.03■□□□□ -0
VAPA-202ENST00000400000 B4GALNT4Q76KP1 1039 aa15.03■□□□□ -0
VAPA-202ENST00000400000 DNAJC17Q9NVM6 304 aaKnown RBP15.03■□□□□ -0
VAPA-202ENST00000400000 SFI1A8K8P3 1242 aa15.03■□□□□ -0
VAPA-202ENST00000400000 PRKAB2O43741 272 aa15.03■□□□□ -0
VAPA-202ENST00000400000 PHKG2P15735 406 aa15.03■□□□□ -0
VAPA-202ENST00000400000 MUM1L1Q5H9M0 696 aa15.03■□□□□ -0
VAPA-202ENST00000400000 POLD4Q9HCU8 107 aa15.03■□□□□ -0
VAPA-202ENST00000400000 RIC8AQ9NPQ8 531 aa15.03■□□□□ -0
VAPA-202ENST00000400000 IFNAR2P48551 515 aa15.03■□□□□ -0
VAPA-202ENST00000400000 CEP128Q6ZU80 1094 aa15.03■□□□□ -0
VAPA-202ENST00000400000 CXorf38Q8TB03 319 aa15.03■□□□□ -0
VAPA-202ENST00000400000 USP28Q96RU2 1077 aa15.03■□□□□ -0
VAPA-202ENST00000400000 SNX25Q9H3E2 840 aa15.03■□□□□ -0
VAPA-202ENST00000400000 ARMCX3Q9UH62 379 aaPredicted RBP15.03■□□□□ -0
VAPA-202ENST00000400000 SFMBT1Q9UHJ3 866 aa15.03■□□□□ -0
VAPA-202ENST00000400000 PKP1Q13835 747 aa15.03■□□□□ -0
VAPA-202ENST00000400000 LMNTD2Q8IXW0 634 aa15.03■□□□□ -0
VAPA-202ENST00000400000 FAM49AQ9H0Q0 323 aaPredicted RBP15.03■□□□□ -0
VAPA-202ENST00000400000 SLC38A10Q9HBR0 1119 aa15.03■□□□□ -0
VAPA-202ENST00000400000 PLCB1Q9NQ66 1216 aa15.03■□□□□ -0
VAPA-202ENST00000400000 ITSN2Q9NZM3 1697 aa15.03■□□□□ -0
VAPA-202ENST00000400000 WDR91A4D1P6 747 aa15.02■□□□□ -0
VAPA-202ENST00000400000 DDIT3P35638 169 aa15.02■□□□□ -0
VAPA-202ENST00000400000 EHHADHQ08426 723 aa15.02■□□□□ -0
VAPA-202ENST00000400000 PROSER3Q2NL68 480 aa15.02■□□□□ -0
VAPA-202ENST00000400000 FANCBQ8NB91 859 aa15.02■□□□□ -0
VAPA-202ENST00000400000 HSPD1P10809 573 aaKnown RBP15.02■□□□□ -0
VAPA-202ENST00000400000 SZRD1Q7Z422 152 aa15.02■□□□□ -0
VAPA-202ENST00000400000 HACD3Q9P035 362 aa15.02■□□□□ -0
VAPA-202ENST00000400000 ATF2P15336 505 aa15.02□□□□□ -0.01
VAPA-202ENST00000400000 SSTR3P32745 418 aaPredicted RBP15.02□□□□□ -0.01
VAPA-202ENST00000400000 IRX4P78413 519 aa15.02□□□□□ -0.01
VAPA-202ENST00000400000 KRT33BQ14525 404 aa15.02□□□□□ -0.01
VAPA-202ENST00000400000 MARCH10Q8NA82 808 aaPredicted RBP15.02□□□□□ -0.01
VAPA-202ENST00000400000 FANCLQ9NW38 375 aa15.02□□□□□ -0.01
VAPA-202ENST00000400000 TBK1Q9UHD2 729 aa15.02□□□□□ -0.01
VAPA-202ENST00000400000 NOC2LQ9Y3T9 749 aaKnown RBP15.02□□□□□ -0.01
VAPA-202ENST00000400000 PI16Q6UXB8 463 aa15.02□□□□□ -0.01
VAPA-202ENST00000400000 NOSTRINQ8IVI9 506 aa15.02□□□□□ -0.01
VAPA-202ENST00000400000 NLRP4Q96MN2 994 aa15.02□□□□□ -0.01
VAPA-202ENST00000400000 SAR1BQ9Y6B6 198 aa15.02□□□□□ -0.01
VAPA-202ENST00000400000 FAM160B1Q5W0V3 765 aa15.02□□□□□ -0.01
VAPA-202ENST00000400000 RNF10Q8N5U6 811 aaKnown RBP15.02□□□□□ -0.01
VAPA-202ENST00000400000 GIGYF1O75420 1035 aaPredicted RBP15.01□□□□□ -0.01
VAPA-202ENST00000400000 SCG2P13521 617 aa15.01□□□□□ -0.01
VAPA-202ENST00000400000 PLEKHG3A1L390 1219 aa15.01□□□□□ -0.01
VAPA-202ENST00000400000 NVLO15381 856 aaKnown RBP15.01□□□□□ -0.01
VAPA-202ENST00000400000 MUM1Q2TAK8 710 aa15.01□□□□□ -0.01
VAPA-202ENST00000400000 ATL3Q6DD88 541 aa15.01□□□□□ -0.01
VAPA-202ENST00000400000 USP17L2Q6R6M4 530 aa15.01□□□□□ -0.01
VAPA-202ENST00000400000 KRT27Q7Z3Y8 459 aa15.01□□□□□ -0.01
VAPA-202ENST00000400000 SLFN12Q8IYM2 578 aa15.01□□□□□ -0.01
VAPA-202ENST00000400000 NRBP2Q9NSY0 501 aa15.01□□□□□ -0.01
VAPA-202ENST00000400000 SPECC1L-ADORA2AF8WAN1 911 aa15.01□□□□□ -0.01
VAPA-202ENST00000400000 S100BP04271 92 aaPredicted RBP15.01□□□□□ -0.01
VAPA-202ENST00000400000 GNGT1P63211 74 aa15.01□□□□□ -0.01
VAPA-202ENST00000400000 RINT1Q6NUQ1 792 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms