RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 TMEM87BQ96K49 555 aa9.78□□□□□ -0.84
USP16-202ENST00000399973 TCEANC2Q96MN5 208 aa9.78□□□□□ -0.84
USP16-202ENST00000399973 PIGSQ96S52 555 aa9.78□□□□□ -0.84
USP16-202ENST00000399973 AMNQ9BXJ7 453 aa9.78□□□□□ -0.84
USP16-202ENST00000399973 KATNBL1Q9H079 304 aa9.78□□□□□ -0.84
USP16-202ENST00000399973 SPC25Q9HBM1 224 aa9.78□□□□□ -0.84
USP16-202ENST00000399973 PRDM5Q9NQX1 630 aaPredicted RBP9.78□□□□□ -0.84
USP16-202ENST00000399973 COLQQ9Y215 455 aaPredicted RBP9.78□□□□□ -0.84
USP16-202ENST00000399973 DOCK5Q9H7D0 1870 aa9.77□□□□□ -0.85
USP16-202ENST00000399973 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.77□□□□□ -0.85
USP16-202ENST00000399973 A0A1W2PQ45 241 aaPredicted RBP9.77□□□□□ -0.85
USP16-202ENST00000399973 A0A1W2PQY0 241 aa9.77□□□□□ -0.85
USP16-202ENST00000399973 PALM3A6NDB9 673 aaPredicted RBP9.77□□□□□ -0.85
USP16-202ENST00000399973 ZBTB5O15062 677 aa9.77□□□□□ -0.85
USP16-202ENST00000399973 PPP1R11O60927 126 aaPredicted RBP9.77□□□□□ -0.85
USP16-202ENST00000399973 ADAMTS4O75173 837 aa9.77□□□□□ -0.85
USP16-202ENST00000399973 DUSP11O75319 330 aaKnown RBP9.77□□□□□ -0.85
USP16-202ENST00000399973 CFBP00751 764 aa9.77□□□□□ -0.85
USP16-202ENST00000399973 PTGS1P23219 599 aa9.77□□□□□ -0.85
USP16-202ENST00000399973 KIF5BP33176 963 aa9.77□□□□□ -0.85
USP16-202ENST00000399973 IRX5P78411 483 aaPredicted RBP9.77□□□□□ -0.85
USP16-202ENST00000399973 TROAPQ12815 778 aa9.77□□□□□ -0.85
USP16-202ENST00000399973 TRIM60Q495X7 471 aa9.77□□□□□ -0.85
USP16-202ENST00000399973 TLK2Q86UE8 772 aa9.77□□□□□ -0.85
USP16-202ENST00000399973 MICU3Q86XE3 530 aa9.77□□□□□ -0.85
USP16-202ENST00000399973 IGDCC4Q8TDY8 1250 aa9.77□□□□□ -0.85
USP16-202ENST00000399973 NEK1Q96PY6 1258 aa9.77□□□□□ -0.85
USP16-202ENST00000399973 VTA1Q9NP79 307 aa9.77□□□□□ -0.85
USP16-202ENST00000399973 PDGFCQ9NRA1 345 aa9.77□□□□□ -0.85
USP16-202ENST00000399973 NAP1L2Q9ULW6 460 aaPredicted RBP9.77□□□□□ -0.85
USP16-202ENST00000399973 PHF24Q9UPV7 400 aa9.77□□□□□ -0.85
USP16-202ENST00000399973 MRPL11Q9Y3B7 192 aaKnown RBP9.77□□□□□ -0.85
USP16-202ENST00000399973 MYH7BA7E2Y1 1941 aa9.76□□□□□ -0.85
USP16-202ENST00000399973 REC8O95072 547 aa9.76□□□□□ -0.85
USP16-202ENST00000399973 PLEKHA8P1O95397 391 aa9.76□□□□□ -0.85
USP16-202ENST00000399973 ACLYP53396 1101 aa9.76□□□□□ -0.85
USP16-202ENST00000399973 FGD1P98174 961 aa9.76□□□□□ -0.85
USP16-202ENST00000399973 BEX3Q00994 111 aa9.76□□□□□ -0.85
USP16-202ENST00000399973 KRT32Q14532 448 aa9.76□□□□□ -0.85
USP16-202ENST00000399973 SLC35G1Q2M3R5 365 aa9.76□□□□□ -0.85
USP16-202ENST00000399973 ADCK5Q3MIX3 580 aa9.76□□□□□ -0.85
USP16-202ENST00000399973 MCF2L2Q86YR7 1114 aa9.76□□□□□ -0.85
USP16-202ENST00000399973 RASEFQ8IZ41 740 aa9.76□□□□□ -0.85
USP16-202ENST00000399973 SYTL5Q8TDW5 730 aaPredicted RBP9.76□□□□□ -0.85
USP16-202ENST00000399973 TBC1D5Q92609 795 aa9.76□□□□□ -0.85
USP16-202ENST00000399973 AP5M1Q9H0R1 490 aa9.76□□□□□ -0.85
USP16-202ENST00000399973 STARD7Q9NQZ5 370 aa9.76□□□□□ -0.85
USP16-202ENST00000399973 COL20A1Q9P218 1284 aa9.76□□□□□ -0.85
USP16-202ENST00000399973 PRKAG2Q9UGJ0 569 aa9.76□□□□□ -0.85
USP16-202ENST00000399973 SEC63Q9UGP8 760 aaKnown RBP9.76□□□□□ -0.85
USP16-202ENST00000399973 PCDHA1Q9Y5I3 950 aa9.76□□□□□ -0.85
USP16-202ENST00000399973 SLC12A7Q9Y666 1083 aa9.76□□□□□ -0.85
USP16-202ENST00000399973 TRIOBPQ9H2D6 2365 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 B4DLN1 442 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 CYTH3O43739 400 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 PQBP1O60828 265 aaKnown RBP9.75□□□□□ -0.85
USP16-202ENST00000399973 ASGR1P07306 291 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 CALM1P0DP23 149 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 CALM2P0DP24 149 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 CALM3P0DP25 149 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 SMPD1P17405 629 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 EIF2AK2P19525 551 aaKnown RBP9.75□□□□□ -0.85
USP16-202ENST00000399973 HOXA13P31271 388 aaPredicted RBP9.75□□□□□ -0.85
USP16-202ENST00000399973 MRPL12P52815 198 aaKnown RBP9.75□□□□□ -0.85
USP16-202ENST00000399973 PPP2R5BQ15173 497 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 KCNA10Q16322 511 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 HABP4Q5JVS0 413 aaKnown RBP9.75□□□□□ -0.85
USP16-202ENST00000399973 GNASQ5JWF2 1037 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 TMEM63BQ5T3F8 832 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 ARHGEF16Q5VV41 709 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 SLC39A5Q6ZMH5 540 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 SYNE3Q6ZMZ3 975 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 CMTR1Q8N1G2 835 aaKnown RBP9.75□□□□□ -0.85
USP16-202ENST00000399973 TMTC2Q8N394 836 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 DNERQ8NFT8 737 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 VTI1AQ96AJ9 217 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 RRP36Q96EU6 259 aaKnown RBP9.75□□□□□ -0.85
USP16-202ENST00000399973 GLT1D1Q96MS3 346 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 JAKMIP1Q96N16 626 aaKnown RBP9.75□□□□□ -0.85
USP16-202ENST00000399973 TAAR1Q96RJ0 339 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 RMDN3Q96TC7 470 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 MTA3Q9BTC8 594 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 UPF3AQ9H1J1 476 aaKnown RBP9.75□□□□□ -0.85
USP16-202ENST00000399973 RIOX1Q9H6W3 641 aa9.75□□□□□ -0.85
USP16-202ENST00000399973 LOC102724159A0A0B4J2E5 919 aa9.74□□□□□ -0.85
USP16-202ENST00000399973 PNMA6FA0A0J9YX94 578 aa9.74□□□□□ -0.85
USP16-202ENST00000399973 KLF18A0A0U1RQI7 1052 aa9.74□□□□□ -0.85
USP16-202ENST00000399973 hCG_1642624A0A1W2PR95 340 aa9.74□□□□□ -0.85
USP16-202ENST00000399973 MOXD2PA6NHM9 499 aa9.74□□□□□ -0.85
USP16-202ENST00000399973 OPLAHO14841 1288 aa9.74□□□□□ -0.85
USP16-202ENST00000399973 DYNC1LI2O43237 492 aaPredicted RBP9.74□□□□□ -0.85
USP16-202ENST00000399973 CPA1P15085 419 aa9.74□□□□□ -0.85
USP16-202ENST00000399973 CST5P28325 142 aaPredicted RBP9.74□□□□□ -0.85
USP16-202ENST00000399973 LIFRP42702 1097 aa9.74□□□□□ -0.85
USP16-202ENST00000399973 MAGEA10P43363 369 aaPredicted RBP9.74□□□□□ -0.85
USP16-202ENST00000399973 GNAQP50148 359 aa9.74□□□□□ -0.85
USP16-202ENST00000399973 GJA9P57773 515 aa9.74□□□□□ -0.85
USP16-202ENST00000399973 MDM2Q00987 491 aaPredicted RBP9.74□□□□□ -0.85
USP16-202ENST00000399973 TRAF1Q13077 416 aa9.74□□□□□ -0.85
USP16-202ENST00000399973 PWP2Q15269 919 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms