RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 DDAH1O94760 285 aa15.55■□□□□ 0.08
APOB-202ENST00000399256 RHOBTB3O94955 611 aa15.55■□□□□ 0.08
APOB-202ENST00000399256 DDB1Q16531 1140 aa15.55■□□□□ 0.08
APOB-202ENST00000399256 CCDC178Q5BJE1 867 aa15.55■□□□□ 0.08
APOB-202ENST00000399256 FAM47AQ5JRC9 791 aa15.55■□□□□ 0.08
APOB-202ENST00000399256 DTHD1Q6ZMT9 781 aa15.55■□□□□ 0.08
APOB-202ENST00000399256 RETREG2Q8NC44 543 aa15.55■□□□□ 0.08
APOB-202ENST00000399256 CEP89Q96ST8 783 aa15.55■□□□□ 0.08
APOB-202ENST00000399256 TMEM60Q9H2L4 133 aa15.55■□□□□ 0.08
APOB-202ENST00000399256 UBA7P41226 1012 aa15.55■□□□□ 0.08
APOB-202ENST00000399256 MIIPQ5JXC2 388 aa15.55■□□□□ 0.08
APOB-202ENST00000399256 C8orf74Q6P047 294 aa15.55■□□□□ 0.08
APOB-202ENST00000399256 P2RX5Q93086 422 aa15.55■□□□□ 0.08
APOB-202ENST00000399256 ARHGAP20Q9P2F6 1191 aa15.55■□□□□ 0.08
APOB-202ENST00000399256 HYOU1Q9Y4L1 999 aa15.55■□□□□ 0.08
APOB-202ENST00000399256 DOT1LQ8TEK3 1739 aa15.55■□□□□ 0.08
APOB-202ENST00000399256 MYO1FO00160 1098 aa15.54■□□□□ 0.08
APOB-202ENST00000399256 KIF11P52732 1056 aa15.54■□□□□ 0.08
APOB-202ENST00000399256 SKOR1P84550 965 aa15.54■□□□□ 0.08
APOB-202ENST00000399256 PFKFB3Q16875 520 aaPredicted RBP15.54■□□□□ 0.08
APOB-202ENST00000399256 EMBQ6PCB8 327 aa15.54■□□□□ 0.08
APOB-202ENST00000399256 CCDC91Q7Z6B0 441 aa15.54■□□□□ 0.08
APOB-202ENST00000399256 NOC3LQ8WTT2 800 aaKnown RBP15.54■□□□□ 0.08
APOB-202ENST00000399256 PIGBQ92521 554 aa15.54■□□□□ 0.08
APOB-202ENST00000399256 RBM12Q9NTZ6 932 aaKnown RBP15.54■□□□□ 0.08
APOB-202ENST00000399256 USP21Q9UK80 565 aa15.54■□□□□ 0.08
APOB-202ENST00000399256 DUOX1Q9NRD9 1551 aa15.54■□□□□ 0.08
APOB-202ENST00000399256 EPHB6O15197 1021 aa15.54■□□□□ 0.08
APOB-202ENST00000399256 EPB41P11171 864 aaKnown RBP15.54■□□□□ 0.08
APOB-202ENST00000399256 EIF4A3P38919 411 aaKnown RBP15.54■□□□□ 0.08
APOB-202ENST00000399256 NNTQ13423 1086 aa15.54■□□□□ 0.08
APOB-202ENST00000399256 ALS2CLQ60I27 953 aa15.54■□□□□ 0.08
APOB-202ENST00000399256 ZNF572Q7Z3I7 529 aaPredicted RBP15.54■□□□□ 0.08
APOB-202ENST00000399256 BLIDQ8IZY5 108 aa15.54■□□□□ 0.08
APOB-202ENST00000399256 MS4A14Q96JA4 679 aa15.54■□□□□ 0.08
APOB-202ENST00000399256 FAM207AQ9NSI2 230 aaPredicted RBP15.54■□□□□ 0.08
APOB-202ENST00000399256 ARAP2Q8WZ64 1704 aa15.54■□□□□ 0.08
APOB-202ENST00000399256 KIAA0754O94854 1291 aa15.54■□□□□ 0.08
APOB-202ENST00000399256 DNA2P51530 1060 aa15.54■□□□□ 0.08
APOB-202ENST00000399256 APBA1Q02410 837 aa15.54■□□□□ 0.08
APOB-202ENST00000399256 PDE4DQ08499 809 aa15.54■□□□□ 0.08
APOB-202ENST00000399256 MEX3CQ5U5Q3 659 aaKnown RBP15.54■□□□□ 0.08
APOB-202ENST00000399256 HPS3Q969F9 1004 aa15.54■□□□□ 0.08
APOB-202ENST00000399256 CCDC43Q96MW1 224 aaKnown RBP15.54■□□□□ 0.08
APOB-202ENST00000399256 ZBTB1Q9Y2K1 713 aa15.54■□□□□ 0.08
APOB-202ENST00000399256 ESYT3A0FGR9 886 aa15.53■□□□□ 0.08
APOB-202ENST00000399256 H0YHG0 523 aa15.53■□□□□ 0.08
APOB-202ENST00000399256 FCER1AP12319 257 aa15.53■□□□□ 0.08
APOB-202ENST00000399256 CCNE1P24864 410 aa15.53■□□□□ 0.08
APOB-202ENST00000399256 STK4Q13043 487 aa15.53■□□□□ 0.08
APOB-202ENST00000399256 OTUD6BQ8N6M0 293 aa15.53■□□□□ 0.08
APOB-202ENST00000399256 DHTKD1Q96HY7 919 aaPredicted RBP15.53■□□□□ 0.08
APOB-202ENST00000399256 ALS2CR12Q96Q35 445 aa15.53■□□□□ 0.08
APOB-202ENST00000399256 ZSCAN5CA6NGD5 496 aaPredicted RBP15.53■□□□□ 0.08
APOB-202ENST00000399256 AKR1B10O60218 316 aa15.53■□□□□ 0.08
APOB-202ENST00000399256 FAM153BP0C7A2 387 aa15.53■□□□□ 0.08
APOB-202ENST00000399256 TCP1P17987 556 aaKnown RBP15.53■□□□□ 0.08
APOB-202ENST00000399256 PAFAH1B1P43034 410 aa15.53■□□□□ 0.08
APOB-202ENST00000399256 GUCY1A3Q02108 690 aa15.53■□□□□ 0.08
APOB-202ENST00000399256 FAM153CQ494X1 144 aa15.53■□□□□ 0.08
APOB-202ENST00000399256 CNPY4Q8N129 248 aa15.53■□□□□ 0.08
APOB-202ENST00000399256 RNPC3Q96LT9 517 aaKnown RBP15.53■□□□□ 0.08
APOB-202ENST00000399256 RIOK1Q9BRS2 568 aaKnown RBP15.53■□□□□ 0.08
APOB-202ENST00000399256 KBTBD4Q9NVX7 518 aa15.53■□□□□ 0.08
APOB-202ENST00000399256 FAM153AQ9UHL3 310 aa15.53■□□□□ 0.08
APOB-202ENST00000399256 SALL4Q9UJQ4 1053 aa15.53■□□□□ 0.08
APOB-202ENST00000399256 BAZ2AQ9UIF9 1905 aaKnown RBP15.52■□□□□ 0.08
APOB-202ENST00000399256 BUB1O43683 1085 aa15.52■□□□□ 0.08
APOB-202ENST00000399256 ITIH3Q06033 890 aa15.52■□□□□ 0.08
APOB-202ENST00000399256 FAM98CQ17RN3 349 aaKnown RBP15.52■□□□□ 0.08
APOB-202ENST00000399256 IFT81Q8WYA0 676 aa15.52■□□□□ 0.08
APOB-202ENST00000399256 CAVIN3Q969G5 261 aa15.52■□□□□ 0.08
APOB-202ENST00000399256 NFU1Q9UMS0 254 aa15.52■□□□□ 0.08
APOB-202ENST00000399256 USP17L12C9JPN9 530 aa15.52■□□□□ 0.08
APOB-202ENST00000399256 USP17L21D6R901 530 aa15.52■□□□□ 0.08
APOB-202ENST00000399256 ZPR1O75312 459 aa15.52■□□□□ 0.08
APOB-202ENST00000399256 ERCC3P19447 782 aa15.52■□□□□ 0.08
APOB-202ENST00000399256 CARSP49589 748 aaKnown RBP15.52■□□□□ 0.08
APOB-202ENST00000399256 CDK17Q00537 523 aa15.52■□□□□ 0.08
APOB-202ENST00000399256 PPARDQ03181 441 aa15.52■□□□□ 0.08
APOB-202ENST00000399256 B4GALNT4Q76KP1 1039 aa15.52■□□□□ 0.08
APOB-202ENST00000399256 FAM114A1Q8IWE2 563 aa15.52■□□□□ 0.08
APOB-202ENST00000399256 RUBCNQ92622 972 aa15.52■□□□□ 0.08
APOB-202ENST00000399256 LRP5O75197 1615 aa15.52■□□□□ 0.07
APOB-202ENST00000399256 A0A1W2PQJ5 194 aa15.52■□□□□ 0.07
APOB-202ENST00000399256 BICDL2A1A5D9 508 aa15.52■□□□□ 0.07
APOB-202ENST00000399256 PRLRP16471 622 aa15.52■□□□□ 0.07
APOB-202ENST00000399256 GUCY2FP51841 1108 aa15.52■□□□□ 0.07
APOB-202ENST00000399256 NAP1L1P55209 391 aaKnown RBP15.52■□□□□ 0.07
APOB-202ENST00000399256 ASIC1P78348 528 aa15.52■□□□□ 0.07
APOB-202ENST00000399256 ATP2B2Q01814 1243 aa15.52■□□□□ 0.07
APOB-202ENST00000399256 INF2Q27J81 1249 aa15.52■□□□□ 0.07
APOB-202ENST00000399256 SLC4A8Q2Y0W8 1093 aa15.52■□□□□ 0.07
APOB-202ENST00000399256 MARCH10Q8NA82 808 aaPredicted RBP15.52■□□□□ 0.07
APOB-202ENST00000399256 PRPF38AQ8NAV1 312 aaKnown RBP15.52■□□□□ 0.07
APOB-202ENST00000399256 ERGIC2Q96RQ1 377 aa15.52■□□□□ 0.07
APOB-202ENST00000399256 MMRN2Q9H8L6 949 aa15.52■□□□□ 0.07
APOB-202ENST00000399256 BCL9O00512 1426 aa15.51■□□□□ 0.07
APOB-202ENST00000399256 CCDC194A0A1B0GVG4 234 aa15.51■□□□□ 0.07
APOB-202ENST00000399256 GLI1P08151 1106 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms