RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 MICU3Q86XE3 530 aa16.54■□□□□ 0.24
HDDC2-202ENST00000398153 TEX2Q8IWB9 1127 aa16.54■□□□□ 0.24
HDDC2-202ENST00000398153 HTATIP2Q9BUP3 242 aa16.54■□□□□ 0.24
HDDC2-202ENST00000398153 CYP46A1Q9Y6A2 500 aa16.54■□□□□ 0.24
HDDC2-202ENST00000398153 FRMPD3Q5JV73 1810 aa16.54■□□□□ 0.24
HDDC2-202ENST00000398153 KLF18A0A0U1RQI7 1052 aa16.53■□□□□ 0.24
HDDC2-202ENST00000398153 RARBP10826 455 aa16.53■□□□□ 0.24
HDDC2-202ENST00000398153 ALDH5A1P51649 535 aaPredicted RBP16.53■□□□□ 0.24
HDDC2-202ENST00000398153 PRAMEF19Q5SWL8 479 aa16.53■□□□□ 0.24
HDDC2-202ENST00000398153 TMTC3Q6ZXV5 915 aa16.53■□□□□ 0.24
HDDC2-202ENST00000398153 HOMER1Q86YM7 354 aa16.53■□□□□ 0.24
HDDC2-202ENST00000398153 SRBD1Q8N5C6 995 aaKnown RBP16.53■□□□□ 0.24
HDDC2-202ENST00000398153 IL17RAQ96F46 866 aa16.53■□□□□ 0.24
HDDC2-202ENST00000398153 TCEANC2Q96MN5 208 aa16.53■□□□□ 0.24
HDDC2-202ENST00000398153 VTA1Q9NP79 307 aa16.53■□□□□ 0.24
HDDC2-202ENST00000398153 BRPF3Q9ULD4 1205 aa16.53■□□□□ 0.24
HDDC2-202ENST00000398153 DNM1LO00429 736 aa16.52■□□□□ 0.24
HDDC2-202ENST00000398153 PPP1R11O60927 126 aaPredicted RBP16.52■□□□□ 0.24
HDDC2-202ENST00000398153 CALML3P27482 149 aa16.52■□□□□ 0.24
HDDC2-202ENST00000398153 HSD17B4P51659 736 aa16.52■□□□□ 0.24
HDDC2-202ENST00000398153 RTN1Q16799 776 aa16.52■□□□□ 0.24
HDDC2-202ENST00000398153 SLC30A10Q6XR72 485 aa16.52■□□□□ 0.24
HDDC2-202ENST00000398153 BRF1Q92994 677 aa16.52■□□□□ 0.24
HDDC2-202ENST00000398153 IWS1Q96ST2 819 aa16.52■□□□□ 0.24
HDDC2-202ENST00000398153 NID2Q14112 1375 aa16.51■□□□□ 0.23
HDDC2-202ENST00000398153 ASTN1O14525 1302 aa16.51■□□□□ 0.23
HDDC2-202ENST00000398153 LCTP09848 1927 aa16.51■□□□□ 0.23
HDDC2-202ENST00000398153 DUSP11O75319 330 aaKnown RBP16.51■□□□□ 0.23
HDDC2-202ENST00000398153 PLEKHA8P1O95397 391 aa16.51■□□□□ 0.23
HDDC2-202ENST00000398153 TAL1P17542 331 aaPredicted RBP16.51■□□□□ 0.23
HDDC2-202ENST00000398153 RXRAP19793 462 aa16.51■□□□□ 0.23
HDDC2-202ENST00000398153 EDNRBP24530 442 aa16.51■□□□□ 0.23
HDDC2-202ENST00000398153 IQSEC1Q6DN90 963 aa16.51■□□□□ 0.23
HDDC2-202ENST00000398153 SYTL5Q8TDW5 730 aaPredicted RBP16.51■□□□□ 0.23
HDDC2-202ENST00000398153 NSUN6Q8TEA1 469 aaKnown RBP16.51■□□□□ 0.23
HDDC2-202ENST00000398153 PAWRQ96IZ0 340 aaKnown RBP16.51■□□□□ 0.23
HDDC2-202ENST00000398153 KATNBL1Q9H079 304 aa16.51■□□□□ 0.23
HDDC2-202ENST00000398153 ALDH8A1Q9H2A2 487 aaPredicted RBP16.51■□□□□ 0.23
HDDC2-202ENST00000398153 ZHX1Q9UKY1 873 aaPredicted RBP16.51■□□□□ 0.23
HDDC2-202ENST00000398153 MKI67P46013 3256 aaKnown RBP16.5■□□□□ 0.23
HDDC2-202ENST00000398153 BAZ2BQ9UIF8 2168 aaKnown RBP16.5■□□□□ 0.23
HDDC2-202ENST00000398153 MCM3APO60318 1980 aa16.5■□□□□ 0.23
HDDC2-202ENST00000398153 GOLGA8AA7E2F4 631 aa16.5■□□□□ 0.23
HDDC2-202ENST00000398153 GOLGA8BA8MQT2 603 aa16.5■□□□□ 0.23
HDDC2-202ENST00000398153 hCG_1984214I3L0E3 225 aa16.5■□□□□ 0.23
HDDC2-202ENST00000398153 CFBP00751 764 aa16.5■□□□□ 0.23
HDDC2-202ENST00000398153 CPA1P15085 419 aa16.5■□□□□ 0.23
HDDC2-202ENST00000398153 MNX1P50219 401 aaPredicted RBP16.5■□□□□ 0.23
HDDC2-202ENST00000398153 METAP2P50579 478 aaKnown RBP eCLIP16.5■□□□□ 0.23
HDDC2-202ENST00000398153 CCDC144BQ3MJ40 725 aa16.5■□□□□ 0.23
HDDC2-202ENST00000398153 RNF180Q86T96 592 aa16.5■□□□□ 0.23
HDDC2-202ENST00000398153 ZNF713Q8N859 430 aaPredicted RBP16.5■□□□□ 0.23
HDDC2-202ENST00000398153 C11orf49Q9H6J7 331 aa16.5■□□□□ 0.23
HDDC2-202ENST00000398153 SPC25Q9HBM1 224 aa16.5■□□□□ 0.23
HDDC2-202ENST00000398153 XPNPEP3Q9NQH7 507 aa16.5■□□□□ 0.23
HDDC2-202ENST00000398153 RBM27Q9P2N5 1060 aaKnown RBP16.5■□□□□ 0.23
HDDC2-202ENST00000398153 Q9Y3F1 56 aa16.5■□□□□ 0.23
HDDC2-202ENST00000398153 KBTBD13C9JR72 458 aa16.49■□□□□ 0.23
HDDC2-202ENST00000398153 GCOM1H8Y6P7 765 aaPredicted RBP16.49■□□□□ 0.23
HDDC2-202ENST00000398153 OPLAHO14841 1288 aa16.49■□□□□ 0.23
HDDC2-202ENST00000398153 POLR2MP0CAP2 368 aa16.49■□□□□ 0.23
HDDC2-202ENST00000398153 COL6A1P12109 1028 aa16.49■□□□□ 0.23
HDDC2-202ENST00000398153 NKX3-2P78367 333 aa16.49■□□□□ 0.23
HDDC2-202ENST00000398153 PDE4DQ08499 809 aa16.49■□□□□ 0.23
HDDC2-202ENST00000398153 APOBRQ0VD83 1088 aa16.49■□□□□ 0.23
HDDC2-202ENST00000398153 ZNF274Q96GC6 653 aaPredicted RBP16.49■□□□□ 0.23
HDDC2-202ENST00000398153 RMDN3Q96TC7 470 aa16.49■□□□□ 0.23
HDDC2-202ENST00000398153 TSEN34Q9BSV6 310 aaKnown RBP16.49■□□□□ 0.23
HDDC2-202ENST00000398153 RBM47A0AV96 593 aaKnown RBP16.48■□□□□ 0.23
HDDC2-202ENST00000398153 PIK3CDO00329 1044 aa16.48■□□□□ 0.23
HDDC2-202ENST00000398153 TNFAIP2Q03169 654 aa16.48■□□□□ 0.23
HDDC2-202ENST00000398153 FUT2Q10981 343 aa16.48■□□□□ 0.23
HDDC2-202ENST00000398153 ANKRD1Q15327 319 aa16.48■□□□□ 0.23
HDDC2-202ENST00000398153 TAPT1Q6NXT6 567 aa16.48■□□□□ 0.23
HDDC2-202ENST00000398153 TBC1D5Q92609 795 aa16.48■□□□□ 0.23
HDDC2-202ENST00000398153 PURBQ96QR8 312 aaKnown RBP16.48■□□□□ 0.23
HDDC2-202ENST00000398153 FAM217BQ9NTX9 383 aaPredicted RBP16.48■□□□□ 0.23
HDDC2-202ENST00000398153 PDRG1Q9NUG6 133 aa16.48■□□□□ 0.23
HDDC2-202ENST00000398153 CST5P28325 142 aaPredicted RBP16.47■□□□□ 0.23
HDDC2-202ENST00000398153 GJA9P57773 515 aa16.47■□□□□ 0.23
HDDC2-202ENST00000398153 TOB2Q14106 344 aaPredicted RBP16.47■□□□□ 0.23
HDDC2-202ENST00000398153 LRRC41Q15345 812 aa16.47■□□□□ 0.23
HDDC2-202ENST00000398153 STXBP2Q15833 593 aa16.47■□□□□ 0.23
HDDC2-202ENST00000398153 ARHGEF16Q5VV41 709 aa16.47■□□□□ 0.23
HDDC2-202ENST00000398153 CMTR1Q8N1G2 835 aaKnown RBP16.47■□□□□ 0.23
HDDC2-202ENST00000398153 CCDC82Q8N4S0 544 aa16.47■□□□□ 0.23
HDDC2-202ENST00000398153 CUL5Q93034 780 aa16.47■□□□□ 0.23
HDDC2-202ENST00000398153 TAAR1Q96RJ0 339 aa16.47■□□□□ 0.23
HDDC2-202ENST00000398153 GLT8D2Q9H1C3 349 aa16.47■□□□□ 0.23
HDDC2-202ENST00000398153 UPF3AQ9H1J1 476 aaKnown RBP16.47■□□□□ 0.23
HDDC2-202ENST00000398153 NAP1L2Q9ULW6 460 aaPredicted RBP16.47■□□□□ 0.23
HDDC2-202ENST00000398153 LRRC37A2A6NM11 1700 aa16.47■□□□□ 0.23
HDDC2-202ENST00000398153 CNTNAP5Q8WYK1 1306 aa16.46■□□□□ 0.23
HDDC2-202ENST00000398153 NKRFO15226 690 aaKnown RBP eCLIP16.46■□□□□ 0.23
HDDC2-202ENST00000398153 ADAMTS4O75173 837 aa16.46■□□□□ 0.23
HDDC2-202ENST00000398153 EIF3JO75822 258 aaKnown RBP16.46■□□□□ 0.23
HDDC2-202ENST00000398153 PDIA3P30101 505 aaKnown RBP16.46■□□□□ 0.23
HDDC2-202ENST00000398153 CDC27P30260 824 aa16.46■□□□□ 0.23
HDDC2-202ENST00000398153 ADD1P35611 737 aaKnown RBP16.46■□□□□ 0.23
HDDC2-202ENST00000398153 C8orf34Q49A92 452 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms