RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 PAGR1Q9BTK6 254 aa17.03■□□□□ 0.32
CAPN3-207ENST00000397200 GOLPH3LQ9H4A5 285 aa17.03■□□□□ 0.32
CAPN3-207ENST00000397200 CTAGE5O15320 804 aa17.02■□□□□ 0.31
CAPN3-207ENST00000397200 CEBPZQ03701 1054 aaKnown RBP17.02■□□□□ 0.31
CAPN3-207ENST00000397200 TYRO3Q06418 890 aa17.02■□□□□ 0.31
CAPN3-207ENST00000397200 PLS1Q14651 629 aa17.02■□□□□ 0.31
CAPN3-207ENST00000397200 PPP1R18Q6NYC8 613 aa17.02■□□□□ 0.31
CAPN3-207ENST00000397200 CCAR1Q8IX12 1150 aaKnown RBP17.02■□□□□ 0.31
CAPN3-207ENST00000397200 FAM177A1Q8N128 213 aaPredicted RBP17.02■□□□□ 0.31
CAPN3-207ENST00000397200 TEX13BQ9BXU2 312 aa17.02■□□□□ 0.31
CAPN3-207ENST00000397200 PCDHA7Q9UN72 937 aa17.02■□□□□ 0.31
CAPN3-207ENST00000397200 RABGAP1Q9Y3P9 1069 aa17.02■□□□□ 0.31
CAPN3-207ENST00000397200 CLIC4Q9Y696 253 aa17.02■□□□□ 0.31
CAPN3-207ENST00000397200 SMCHD1A6NHR9 2005 aa17.01■□□□□ 0.31
CAPN3-207ENST00000397200 ATP2A1O14983 1001 aa17.01■□□□□ 0.31
CAPN3-207ENST00000397200 MAP2K2P36507 400 aa17.01■□□□□ 0.31
CAPN3-207ENST00000397200 GCLCP48506 637 aaPredicted RBP17.01■□□□□ 0.31
CAPN3-207ENST00000397200 FAM160A1Q05DH4 1040 aa17.01■□□□□ 0.31
CAPN3-207ENST00000397200 ANO1Q5XXA6 986 aa17.01■□□□□ 0.31
CAPN3-207ENST00000397200 SNRNP48Q6IEG0 339 aaKnown RBP17.01■□□□□ 0.31
CAPN3-207ENST00000397200 BTBD7Q9P203 1132 aa17.01■□□□□ 0.31
CAPN3-207ENST00000397200 ZNF214Q9UL59 606 aaPredicted RBP17.01■□□□□ 0.31
CAPN3-207ENST00000397200 MRVI1Q9Y6F6 885 aa17.01■□□□□ 0.31
CAPN3-207ENST00000397200 ABCB11O95342 1321 aa17.01■□□□□ 0.31
CAPN3-207ENST00000397200 ESPNB1AK53 854 aa17■□□□□ 0.31
CAPN3-207ENST00000397200 ALDH1A1P00352 501 aa17■□□□□ 0.31
CAPN3-207ENST00000397200 ALAS1P13196 640 aa17■□□□□ 0.31
CAPN3-207ENST00000397200 TAL1P17542 331 aaPredicted RBP17■□□□□ 0.31
CAPN3-207ENST00000397200 STAT3P40763 770 aa17■□□□□ 0.31
CAPN3-207ENST00000397200 NLRP5P59047 1200 aa17■□□□□ 0.31
CAPN3-207ENST00000397200 TYW1BQ6NUM6 668 aa17■□□□□ 0.31
CAPN3-207ENST00000397200 POTEEQ6S8J3 1075 aa17■□□□□ 0.31
CAPN3-207ENST00000397200 CCDC73Q6ZRK6 1079 aa17■□□□□ 0.31
CAPN3-207ENST00000397200 MRPS27Q92552 414 aaKnown RBP17■□□□□ 0.31
CAPN3-207ENST00000397200 RBPJLQ9UBG7 517 aa17■□□□□ 0.31
CAPN3-207ENST00000397200 KCNJ14Q9UNX9 436 aa17■□□□□ 0.31
CAPN3-207ENST00000397200 MRPL11Q9Y3B7 192 aaKnown RBP17■□□□□ 0.31
CAPN3-207ENST00000397200 THSD7BQ9C0I4 1608 aa17■□□□□ 0.31
CAPN3-207ENST00000397200 SPTLC2O15270 562 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 CNMDO75829 334 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 MMP1P03956 469 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 ME1P48163 572 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 STK38Q15208 465 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 FMR1NBQ8N0W7 255 aaPredicted RBP16.99■□□□□ 0.31
CAPN3-207ENST00000397200 FAM200AQ8TCP9 573 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 SHISA4Q96DD7 197 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 PHF20Q9BVI0 1012 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 SPATC1LQ9H0A9 340 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 ZFYVE28Q9HCC9 887 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 C6orf50Q9HD87 102 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 TXNRD2Q9NNW7 524 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 ESYT2A0FGR8 921 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 SMCO2A6NFE2 343 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 CALML3P27482 149 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 SLC39A14Q15043 492 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 PTPAQ15257 358 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 SAFBQ15424 915 aaKnown RBP eCLIP16.99■□□□□ 0.31
CAPN3-207ENST00000397200 CAMK4Q16566 473 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 TKFCQ3LXA3 575 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 ANKRD13CQ8N6S4 541 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 FSIP1Q8NA03 581 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 ZMYND12Q9H0C1 365 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 BRMS1Q9HCU9 246 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 HOMER2Q9NSB8 354 aa16.99■□□□□ 0.31
CAPN3-207ENST00000397200 RBBP6Q7Z6E9 1792 aaKnown RBP16.98■□□□□ 0.31
CAPN3-207ENST00000397200 PEX10O60683 326 aa16.98■□□□□ 0.31
CAPN3-207ENST00000397200 PPP6R2O75170 966 aa16.98■□□□□ 0.31
CAPN3-207ENST00000397200 GNA11P29992 359 aa16.98■□□□□ 0.31
CAPN3-207ENST00000397200 CLCN1P35523 988 aa16.98■□□□□ 0.31
CAPN3-207ENST00000397200 ADCY7P51828 1080 aa16.98■□□□□ 0.31
CAPN3-207ENST00000397200 ERVK-9P63128 1117 aa16.98■□□□□ 0.31
CAPN3-207ENST00000397200 ERVK-24P63145 666 aa16.98■□□□□ 0.31
CAPN3-207ENST00000397200 AXDND1Q5T1B0 1012 aaPredicted RBP16.98■□□□□ 0.31
CAPN3-207ENST00000397200 GALNT17Q6IS24 598 aa16.98■□□□□ 0.31
CAPN3-207ENST00000397200 RIOX2Q8IUF8 465 aa16.98■□□□□ 0.31
CAPN3-207ENST00000397200 GPRC5AQ8NFJ5 357 aa16.98■□□□□ 0.31
CAPN3-207ENST00000397200 TRERF1Q96PN7 1200 aa16.98■□□□□ 0.31
CAPN3-207ENST00000397200 GLT8D2Q9H1C3 349 aa16.98■□□□□ 0.31
CAPN3-207ENST00000397200 FOXP1Q9H334 677 aaPredicted RBP16.98■□□□□ 0.31
CAPN3-207ENST00000397200 RNF146Q9NTX7 359 aa16.98■□□□□ 0.31
CAPN3-207ENST00000397200 ADGRA2Q96PE1 1338 aa16.97■□□□□ 0.31
CAPN3-207ENST00000397200 FAM237AA0A1B0GTK4 181 aa16.97■□□□□ 0.31
CAPN3-207ENST00000397200 CA12O43570 354 aa16.97■□□□□ 0.31
CAPN3-207ENST00000397200 CAVIN2O95810 425 aa16.97■□□□□ 0.31
CAPN3-207ENST00000397200 COPB2P35606 906 aa16.97■□□□□ 0.31
CAPN3-207ENST00000397200 CKAP2LQ8IYA6 745 aa16.97■□□□□ 0.31
CAPN3-207ENST00000397200 CUL5Q93034 780 aa16.97■□□□□ 0.31
CAPN3-207ENST00000397200 MOV10L1Q9BXT6 1211 aaKnown RBP16.97■□□□□ 0.31
CAPN3-207ENST00000397200 PSTPIP2Q9H939 334 aa16.97■□□□□ 0.31
CAPN3-207ENST00000397200 RIC8AQ9NPQ8 531 aa16.97■□□□□ 0.31
CAPN3-207ENST00000397200 RTN4Q9NQC3 1192 aaKnown RBP16.97■□□□□ 0.31
CAPN3-207ENST00000397200 MORF4L1Q9UBU8 362 aa16.97■□□□□ 0.31
CAPN3-207ENST00000397200 PCDHA4Q9UN74 947 aa16.97■□□□□ 0.31
CAPN3-207ENST00000397200 RIPK3Q9Y572 518 aa16.97■□□□□ 0.31
CAPN3-207ENST00000397200 MORC2Q9Y6X9 1032 aaPredicted RBP16.97■□□□□ 0.31
CAPN3-207ENST00000397200 TLR2O60603 784 aa16.96■□□□□ 0.31
CAPN3-207ENST00000397200 KINO60870 393 aaKnown RBP16.96■□□□□ 0.31
CAPN3-207ENST00000397200 SLC25A27O95847 323 aa16.96■□□□□ 0.31
CAPN3-207ENST00000397200 KRT2P35908 639 aa16.96■□□□□ 0.31
CAPN3-207ENST00000397200 MRPL12P52815 198 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms