RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 SMARCAL1Q9NZC9 954 aa10.19□□□□□ -0.78
CAPN3-206ENST00000397163 ODF2LQ9ULJ1 636 aa10.19□□□□□ -0.78
CAPN3-206ENST00000397163 CAPN6Q9Y6Q1 641 aa10.19□□□□□ -0.78
CAPN3-206ENST00000397163 ADAMTS3O15072 1205 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 DDAH1O94760 285 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 MOCS3O95396 460 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 RPSAP08865 295 aaKnown RBP10.18□□□□□ -0.78
CAPN3-206ENST00000397163 PDHBP11177 359 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 VEGFAP15692 232 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-206ENST00000397163 NEDD9Q14511 834 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 TYW1BQ6NUM6 668 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 POTEDQ86YR6 584 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 GPIHBP1Q8IV16 184 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 ARL8AQ96BM9 186 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 FAXDC2Q96IV6 333 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 PURBQ96QR8 312 aaKnown RBP10.18□□□□□ -0.78
CAPN3-206ENST00000397163 TTYH3Q9C0H2 523 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 ANAPC4Q9UJX5 808 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 TNS2Q63HR2 1409 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 RASSF10A6NK89 507 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 PLEKP08567 350 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-206ENST00000397163 PAFAH1B1P43034 410 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 EPHB4P54760 987 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 KCNB1Q14721 858 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 NAALADL2Q58DX5 795 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 CCDC178Q5BJE1 867 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 NFRKBQ6P4R8 1299 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 RASGRP4Q8TDF6 673 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 CCDC47Q96A33 483 aaKnown RBP10.18□□□□□ -0.78
CAPN3-206ENST00000397163 SCLT1Q96NL6 688 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 VEZTQ9HBM0 779 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 TIAM2Q8IVF5 1701 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 ZNF263O14978 683 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 ADAMTS2O95450 1211 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 C2CD5Q86YS7 1000 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 FAM114A1Q8IWE2 563 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 TSEN2Q8NCE0 465 aaKnown RBP10.18□□□□□ -0.78
CAPN3-206ENST00000397163 DHTKD1Q96HY7 919 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-206ENST00000397163 ALS2CR12Q96Q35 445 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 OSBPL9Q96SU4 736 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 EHD2Q9NZN4 543 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 MCM8Q9UJA3 840 aa10.18□□□□□ -0.78
CAPN3-206ENST00000397163 DISP2A7MBM2 1401 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 KLRC4O43908 158 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 AKR1B10O60218 316 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 NMT2O60551 498 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 ATP2C2O75185 946 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 RHOBTB3O94955 611 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 TCP1P17987 556 aaKnown RBP10.17□□□□□ -0.78
CAPN3-206ENST00000397163 DYNLL1P63167 89 aaKnown RBP10.17□□□□□ -0.78
CAPN3-206ENST00000397163 MEX3CQ5U5Q3 659 aaKnown RBP10.17□□□□□ -0.78
CAPN3-206ENST00000397163 ALS2CLQ60I27 953 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 EMBQ6PCB8 327 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 BLIDQ8IZY5 108 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 GIMAP8Q8ND71 665 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-206ENST00000397163 P2RX5Q93086 422 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 DUSP9Q99956 384 aaKnown RBP10.17□□□□□ -0.78
CAPN3-206ENST00000397163 SH3GL2Q99962 352 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 STIM2Q9P246 746 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 HYOU1Q9Y4L1 999 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 PCDHA13Q9Y5I0 950 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 BAZ2BQ9UIF8 2168 aaKnown RBP10.17□□□□□ -0.78
CAPN3-206ENST00000397163 CCDC194A0A1B0GVG4 234 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 BICDL2A1A5D9 508 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 IRF6O14896 467 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 CALML3P27482 149 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 NAP1L1P55209 391 aaKnown RBP10.17□□□□□ -0.78
CAPN3-206ENST00000397163 PDE4DQ08499 809 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 PFKFB3Q16875 520 aaPredicted RBP10.17□□□□□ -0.78
CAPN3-206ENST00000397163 FAM47AQ5JRC9 791 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 C8orf74Q6P047 294 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 B4GALNT4Q76KP1 1039 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 PIGBQ92521 554 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 SH2D4AQ9H788 454 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 ZBTB1Q9Y2K1 713 aa10.17□□□□□ -0.78
CAPN3-206ENST00000397163 PPP1R12BO60237 982 aaPredicted RBP10.16□□□□□ -0.78
CAPN3-206ENST00000397163 CCNE1P24864 410 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 PEX19P40855 299 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 FNTAP49354 379 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 APBA1Q02410 837 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 TTMPQ5BVD1 217 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 ANKRD40Q6AI12 368 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 SAMD1Q6SPF0 538 aaPredicted RBP10.16□□□□□ -0.78
CAPN3-206ENST00000397163 ANKRD13CQ8N6S4 541 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 C4orf32Q8N8J7 132 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 GPKOWQ92917 476 aaPredicted RBP eCLIP10.16□□□□□ -0.78
CAPN3-206ENST00000397163 PARP4Q9UKK3 1724 aaKnown RBP10.16□□□□□ -0.78
CAPN3-206ENST00000397163 USP17L12C9JPN9 530 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 USP17L21D6R901 530 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 NCK2O43639 380 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 IGHMBP2P38935 993 aaKnown RBP10.16□□□□□ -0.78
CAPN3-206ENST00000397163 KIF11P52732 1056 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 CLNS1AP54105 237 aaKnown RBP10.16□□□□□ -0.78
CAPN3-206ENST00000397163 ASIC1P78348 528 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 HAUS3Q68CZ6 603 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 DZIP3Q86Y13 1208 aaKnown RBP10.16□□□□□ -0.78
CAPN3-206ENST00000397163 RUBCNQ92622 972 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 TMEM60Q9H2L4 133 aa10.16□□□□□ -0.78
CAPN3-206ENST00000397163 FAM207AQ9NSI2 230 aaPredicted RBP10.16□□□□□ -0.78
CAPN3-206ENST00000397163 CHD4Q14839 1912 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms