RNA–Protein interactions for RNA: ENST00000397108.8

FGFR1-208, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 2,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-208ENST00000397108 RBM5P52756 815 aaKnown RBP eCLIP13.16□□□□□ -0.3
FGFR1-208ENST00000397108 AMPD2Q01433 879 aa13.16□□□□□ -0.3
FGFR1-208ENST00000397108 PPFIA1Q13136 1202 aa13.16□□□□□ -0.3
FGFR1-208ENST00000397108 MAP9Q49MG5 647 aa13.16□□□□□ -0.3
FGFR1-208ENST00000397108 RNF187Q5TA31 235 aaPredicted RBP13.16□□□□□ -0.3
FGFR1-208ENST00000397108 HHIPL2Q6UWX4 724 aa13.16□□□□□ -0.3
FGFR1-208ENST00000397108 SULF1Q8IWU6 871 aa13.16□□□□□ -0.3
FGFR1-208ENST00000397108 SMYD4Q8IYR2 804 aaPredicted RBP13.16□□□□□ -0.3
FGFR1-208ENST00000397108 ZKSCAN4Q969J2 545 aaPredicted RBP13.16□□□□□ -0.3
FGFR1-208ENST00000397108 GRIN2DO15399 1336 aa13.16□□□□□ -0.3
FGFR1-208ENST00000397108 ZNF185O15231 689 aa13.16□□□□□ -0.3
FGFR1-208ENST00000397108 MYO1BO43795 1136 aa13.16□□□□□ -0.3
FGFR1-208ENST00000397108 GYPCP04921 128 aa13.16□□□□□ -0.3
FGFR1-208ENST00000397108 ATP1A1P05023 1023 aaKnown RBP13.16□□□□□ -0.3
FGFR1-208ENST00000397108 PAX7P23759 505 aa13.16□□□□□ -0.3
FGFR1-208ENST00000397108 PRMT6Q96LA8 375 aaPredicted RBP13.16□□□□□ -0.3
FGFR1-208ENST00000397108 ZDHHC15Q96MV8 337 aa13.16□□□□□ -0.3
FGFR1-208ENST00000397108 ALG1Q9BT22 464 aa13.16□□□□□ -0.3
FGFR1-208ENST00000397108 PRC1O43663 620 aa13.15□□□□□ -0.3
FGFR1-208ENST00000397108 NEBLO76041 1014 aa13.15□□□□□ -0.3
FGFR1-208ENST00000397108 KIAA0754O94854 1291 aa13.15□□□□□ -0.3
FGFR1-208ENST00000397108 MDM2Q00987 491 aaPredicted RBP13.15□□□□□ -0.3
FGFR1-208ENST00000397108 TUBB2AQ13885 445 aa13.15□□□□□ -0.3
FGFR1-208ENST00000397108 KCTD16Q68DU8 428 aa13.15□□□□□ -0.3
FGFR1-208ENST00000397108 SND1Q7KZF4 910 aaKnown RBP eCLIP13.15□□□□□ -0.3
FGFR1-208ENST00000397108 APOBEC3FQ8IUX4 373 aaKnown RBP13.15□□□□□ -0.3
FGFR1-208ENST00000397108 JMYQ8N9B5 988 aa13.15□□□□□ -0.3
FGFR1-208ENST00000397108 TUBB2BQ9BVA1 445 aa13.15□□□□□ -0.3
FGFR1-208ENST00000397108 ADM5C9JUS6 153 aa13.15□□□□□ -0.3
FGFR1-208ENST00000397108 SSBP05455 408 aaKnown RBP eCLIP13.15□□□□□ -0.3
FGFR1-208ENST00000397108 ELF1P32519 619 aa13.15□□□□□ -0.3
FGFR1-208ENST00000397108 FNTAP49354 379 aa13.15□□□□□ -0.3
FGFR1-208ENST00000397108 TUBB4BP68371 445 aa13.15□□□□□ -0.3
FGFR1-208ENST00000397108 KRT40Q6A162 431 aa13.15□□□□□ -0.3
FGFR1-208ENST00000397108 CAGE1Q8TC20 777 aa13.15□□□□□ -0.3
FGFR1-208ENST00000397108 ABCF2Q9UG63 623 aa13.15□□□□□ -0.3
FGFR1-208ENST00000397108 TUBBP07437 444 aa13.14□□□□□ -0.31
FGFR1-208ENST00000397108 LRCH2Q5VUJ6 765 aa13.14□□□□□ -0.31
FGFR1-208ENST00000397108 CEP57Q86XR8 500 aa13.14□□□□□ -0.31
FGFR1-208ENST00000397108 SH2D3CQ8N5H7 860 aa13.14□□□□□ -0.31
FGFR1-208ENST00000397108 KBTBD3Q8NAB2 608 aa13.14□□□□□ -0.31
FGFR1-208ENST00000397108 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.14□□□□□ -0.31
FGFR1-208ENST00000397108 NUP88Q99567 741 aaPredicted RBP13.14□□□□□ -0.31
FGFR1-208ENST00000397108 CHP1Q99653 195 aa13.14□□□□□ -0.31
FGFR1-208ENST00000397108 MYH15Q9Y2K3 1946 aa13.14□□□□□ -0.31
FGFR1-208ENST00000397108 C2orf54Q08AI8 447 aa13.14□□□□□ -0.31
FGFR1-208ENST00000397108 SPDYE2Q495Y8 402 aa13.14□□□□□ -0.31
FGFR1-208ENST00000397108 DZIP1Q86YF9 867 aaKnown RBP13.14□□□□□ -0.31
FGFR1-208ENST00000397108 ARL8AQ96BM9 186 aa13.14□□□□□ -0.31
FGFR1-208ENST00000397108 MIEF2Q96C03 454 aa13.14□□□□□ -0.31
FGFR1-208ENST00000397108 MAP3K14Q99558 947 aa13.14□□□□□ -0.31
FGFR1-208ENST00000397108 HAUS7Q99871 368 aa13.14□□□□□ -0.31
FGFR1-208ENST00000397108 NAA15Q9BXJ9 866 aaKnown RBP13.14□□□□□ -0.31
FGFR1-208ENST00000397108 CREBZFQ9NS37 354 aa13.14□□□□□ -0.31
FGFR1-208ENST00000397108 TMEM88BA6NKF7 163 aa13.14□□□□□ -0.31
FGFR1-208ENST00000397108 PPP6R2O75170 966 aa13.14□□□□□ -0.31
FGFR1-208ENST00000397108 NF2P35240 595 aa13.14□□□□□ -0.31
FGFR1-208ENST00000397108 ZAP70P43403 619 aa13.14□□□□□ -0.31
FGFR1-208ENST00000397108 AFMP43652 599 aa13.14□□□□□ -0.31
FGFR1-208ENST00000397108 NEDD9Q14511 834 aa13.14□□□□□ -0.31
FGFR1-208ENST00000397108 USP49Q70CQ1 688 aa13.14□□□□□ -0.31
FGFR1-208ENST00000397108 APTXQ7Z2E3 356 aaKnown RBP13.14□□□□□ -0.31
FGFR1-208ENST00000397108 MLKLQ8NB16 471 aa13.14□□□□□ -0.31
FGFR1-208ENST00000397108 DIXDC1Q155Q3 683 aa13.13□□□□□ -0.31
FGFR1-208ENST00000397108 APOBEC3HQ6NTF7 200 aaKnown RBP13.13□□□□□ -0.31
FGFR1-208ENST00000397108 CCNI2Q6ZMN8 369 aaPredicted RBP13.13□□□□□ -0.31
FGFR1-208ENST00000397108 SLF2Q8IX21 1173 aa13.13□□□□□ -0.31
FGFR1-208ENST00000397108 ZNF70Q9UC06 446 aaPredicted RBP13.13□□□□□ -0.31
FGFR1-208ENST00000397108 DAGLAQ9Y4D2 1042 aa13.13□□□□□ -0.31
FGFR1-208ENST00000397108 CD44P16070 742 aaKnown RBP13.13□□□□□ -0.31
FGFR1-208ENST00000397108 MATR3P43243 847 aaKnown RBP eCLIP13.13□□□□□ -0.31
FGFR1-208ENST00000397108 MECOMQ03112 1051 aa13.13□□□□□ -0.31
FGFR1-208ENST00000397108 MORC3Q14149 939 aa13.13□□□□□ -0.31
FGFR1-208ENST00000397108 TRAPPC11Q7Z392 1133 aa13.13□□□□□ -0.31
FGFR1-208ENST00000397108 HDAC7Q8WUI4 952 aa13.13□□□□□ -0.31
FGFR1-208ENST00000397108 DSCC1Q9BVC3 393 aa13.13□□□□□ -0.31
FGFR1-208ENST00000397108 VPS16Q9H269 839 aa13.13□□□□□ -0.31
FGFR1-208ENST00000397108 ODF2LQ9ULJ1 636 aa13.13□□□□□ -0.31
FGFR1-208ENST00000397108 GAKO14976 1311 aa13.13□□□□□ -0.31
FGFR1-208ENST00000397108 CLRN2A0PK11 232 aa13.12□□□□□ -0.31
FGFR1-208ENST00000397108 M0R2C6 588 aa13.12□□□□□ -0.31
FGFR1-208ENST00000397108 CST9Q5W186 159 aa13.12□□□□□ -0.31
FGFR1-208ENST00000397108 CDCA5Q96FF9 252 aa13.12□□□□□ -0.31
FGFR1-208ENST00000397108 FAM163AQ96GL9 167 aaPredicted RBP13.12□□□□□ -0.31
FGFR1-208ENST00000397108 TDRD3Q9H7E2 651 aaKnown RBP13.12□□□□□ -0.31
FGFR1-208ENST00000397108 VEZTQ9HBM0 779 aa13.12□□□□□ -0.31
FGFR1-208ENST00000397108 LRP2BPQ9P2M1 347 aa13.12□□□□□ -0.31
FGFR1-208ENST00000397108 ADD3Q9UEY8 706 aaKnown RBP13.12□□□□□ -0.31
FGFR1-208ENST00000397108 MCM8Q9UJA3 840 aa13.12□□□□□ -0.31
FGFR1-208ENST00000397108 SAR1BQ9Y6B6 198 aa13.12□□□□□ -0.31
FGFR1-208ENST00000397108 PDE2AO00408 941 aaPredicted RBP13.12□□□□□ -0.31
FGFR1-208ENST00000397108 SLC7A5Q01650 507 aa13.12□□□□□ -0.31
FGFR1-208ENST00000397108 TRDNQ13061 729 aa13.12□□□□□ -0.31
FGFR1-208ENST00000397108 NAIF1Q69YI7 327 aaPredicted RBP13.12□□□□□ -0.31
FGFR1-208ENST00000397108 DLK2Q6UY11 383 aa13.12□□□□□ -0.31
FGFR1-208ENST00000397108 ZNF384Q8TF68 577 aa13.12□□□□□ -0.31
FGFR1-208ENST00000397108 NSUN4Q96CB9 384 aaKnown RBP13.12□□□□□ -0.31
FGFR1-208ENST00000397108 PAG1Q9NWQ8 432 aa13.12□□□□□ -0.31
FGFR1-208ENST00000397108 DACH1Q9UI36 760 aa13.12□□□□□ -0.31
FGFR1-208ENST00000397108 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms