RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 AMNQ9BXJ7 453 aa16.22■□□□□ 0.19
SEC13-204ENST00000397099 KATNBL1Q9H079 304 aa16.22■□□□□ 0.19
SEC13-204ENST00000397099 JMJD4Q9H9V9 463 aa16.22■□□□□ 0.19
SEC13-204ENST00000397099 MAD2L2Q9UI95 211 aa16.22■□□□□ 0.19
SEC13-204ENST00000397099 ELP1O95163 1332 aa16.21■□□□□ 0.19
SEC13-204ENST00000397099 SLC27A2O14975 620 aa16.21■□□□□ 0.19
SEC13-204ENST00000397099 ZBTB5O15062 677 aa16.21■□□□□ 0.19
SEC13-204ENST00000397099 ZEB2O60315 1214 aa16.21■□□□□ 0.19
SEC13-204ENST00000397099 DDAH1O94760 285 aa16.21■□□□□ 0.19
SEC13-204ENST00000397099 CALM1P0DP23 149 aa16.21■□□□□ 0.19
SEC13-204ENST00000397099 CALM2P0DP24 149 aa16.21■□□□□ 0.19
SEC13-204ENST00000397099 CALM3P0DP25 149 aa16.21■□□□□ 0.19
SEC13-204ENST00000397099 CALML3P27482 149 aa16.21■□□□□ 0.19
SEC13-204ENST00000397099 SMARCA1P28370 1054 aa16.21■□□□□ 0.19
SEC13-204ENST00000397099 GNAQP50148 359 aa16.21■□□□□ 0.19
SEC13-204ENST00000397099 RPS6P62753 249 aaKnown RBP16.21■□□□□ 0.19
SEC13-204ENST00000397099 TROAPQ12815 778 aa16.21■□□□□ 0.19
SEC13-204ENST00000397099 KRT32Q14532 448 aa16.21■□□□□ 0.19
SEC13-204ENST00000397099 USH1GQ495M9 461 aa16.21■□□□□ 0.19
SEC13-204ENST00000397099 CREB3L3Q68CJ9 461 aa16.21■□□□□ 0.19
SEC13-204ENST00000397099 MTMR8Q96EF0 704 aa16.21■□□□□ 0.19
SEC13-204ENST00000397099 LZTS2Q9BRK4 669 aa16.21■□□□□ 0.19
SEC13-204ENST00000397099 LRRC37A2A6NM11 1700 aa16.21■□□□□ 0.19
SEC13-204ENST00000397099 MROH7Q68CQ1 1323 aa16.2■□□□□ 0.18
SEC13-204ENST00000397099 A0A1W2PQ45 241 aaPredicted RBP16.2■□□□□ 0.18
SEC13-204ENST00000397099 A0A1W2PQY0 241 aa16.2■□□□□ 0.18
SEC13-204ENST00000397099 NKRFO15226 690 aaKnown RBP eCLIP16.2■□□□□ 0.18
SEC13-204ENST00000397099 CABYRO75952 493 aa16.2■□□□□ 0.18
SEC13-204ENST00000397099 CENPBP07199 599 aaPredicted RBP16.2■□□□□ 0.18
SEC13-204ENST00000397099 C6orf222P0C671 652 aaPredicted RBP16.2■□□□□ 0.18
SEC13-204ENST00000397099 LIFRP42702 1097 aa16.2■□□□□ 0.18
SEC13-204ENST00000397099 ACLYP53396 1101 aa16.2■□□□□ 0.18
SEC13-204ENST00000397099 QRICH1Q2TAL8 776 aa16.2■□□□□ 0.18
SEC13-204ENST00000397099 STOX1Q6ZVD7 989 aa16.2■□□□□ 0.18
SEC13-204ENST00000397099 NOL8Q76FK4 1167 aaKnown RBP16.2■□□□□ 0.18
SEC13-204ENST00000397099 GLT1D1Q96MS3 346 aa16.2■□□□□ 0.18
SEC13-204ENST00000397099 IWS1Q96ST2 819 aa16.2■□□□□ 0.18
SEC13-204ENST00000397099 AP5M1Q9H0R1 490 aa16.2■□□□□ 0.18
SEC13-204ENST00000397099 RIOX1Q9H6W3 641 aa16.2■□□□□ 0.18
SEC13-204ENST00000397099 PRC1O43663 620 aa16.19■□□□□ 0.18
SEC13-204ENST00000397099 HMGB1P09429 215 aaKnown RBP16.19■□□□□ 0.18
SEC13-204ENST00000397099 EDNRBP24530 442 aa16.19■□□□□ 0.18
SEC13-204ENST00000397099 PDE4DQ08499 809 aa16.19■□□□□ 0.18
SEC13-204ENST00000397099 KCNA10Q16322 511 aa16.19■□□□□ 0.18
SEC13-204ENST00000397099 LRIT3Q3SXY7 679 aa16.19■□□□□ 0.18
SEC13-204ENST00000397099 TSGA10IPQ3SY00 556 aa16.19■□□□□ 0.18
SEC13-204ENST00000397099 BRDTQ58F21 947 aaPredicted RBP16.19■□□□□ 0.18
SEC13-204ENST00000397099 GNASQ5JWF2 1037 aa16.19■□□□□ 0.18
SEC13-204ENST00000397099 STAG2Q8N3U4 1231 aa16.19■□□□□ 0.18
SEC13-204ENST00000397099 CTCFLQ8NI51 663 aaPredicted RBP16.19■□□□□ 0.18
SEC13-204ENST00000397099 NSUN6Q8TEA1 469 aaKnown RBP16.19■□□□□ 0.18
SEC13-204ENST00000397099 TOX2Q96NM4 488 aa16.19■□□□□ 0.18
SEC13-204ENST00000397099 VAT1LQ9HCJ6 419 aa16.19■□□□□ 0.18
SEC13-204ENST00000397099 STARD7Q9NQZ5 370 aa16.19■□□□□ 0.18
SEC13-204ENST00000397099 GNEQ9Y223 722 aaKnown RBP16.19■□□□□ 0.18
SEC13-204ENST00000397099 LAMA2P24043 3122 aaKnown RBP16.19■□□□□ 0.18
SEC13-204ENST00000397099 LAMA3Q16787 3333 aa16.19■□□□□ 0.18
SEC13-204ENST00000397099 ASTN1O14525 1302 aa16.19■□□□□ 0.18
SEC13-204ENST00000397099 RBM47A0AV96 593 aaKnown RBP16.18■□□□□ 0.18
SEC13-204ENST00000397099 CCDC69A6NI79 296 aa16.18■□□□□ 0.18
SEC13-204ENST00000397099 EPB41L2O43491 1005 aaKnown RBP16.18■□□□□ 0.18
SEC13-204ENST00000397099 ANTXR2P58335 489 aa16.18■□□□□ 0.18
SEC13-204ENST00000397099 GHRHRQ02643 423 aa16.18■□□□□ 0.18
SEC13-204ENST00000397099 DUSP28Q4G0W2 176 aa16.18■□□□□ 0.18
SEC13-204ENST00000397099 CCSAPQ6IQ19 270 aaPredicted RBP16.18■□□□□ 0.18
SEC13-204ENST00000397099 TAPT1Q6NXT6 567 aa16.18■□□□□ 0.18
SEC13-204ENST00000397099 SLC30A10Q6XR72 485 aa16.18■□□□□ 0.18
SEC13-204ENST00000397099 TLK2Q86UE8 772 aa16.18■□□□□ 0.18
SEC13-204ENST00000397099 SCFD2Q8WU76 684 aa16.18■□□□□ 0.18
SEC13-204ENST00000397099 CPVLQ9H3G5 476 aa16.18■□□□□ 0.18
SEC13-204ENST00000397099 LY9Q9HBG7 655 aa16.18■□□□□ 0.18
SEC13-204ENST00000397099 PCDHA1Q9Y5I3 950 aa16.18■□□□□ 0.18
SEC13-204ENST00000397099 TAF6LQ9Y6J9 622 aa16.18■□□□□ 0.18
SEC13-204ENST00000397099 PNMA6FA0A0J9YX94 578 aa16.17■□□□□ 0.18
SEC13-204ENST00000397099 PQBP1O60828 265 aaKnown RBP16.17■□□□□ 0.18
SEC13-204ENST00000397099 REC8O95072 547 aa16.17■□□□□ 0.18
SEC13-204ENST00000397099 ASGR1P07306 291 aa16.17■□□□□ 0.18
SEC13-204ENST00000397099 TLE2Q04725 743 aa16.17■□□□□ 0.18
SEC13-204ENST00000397099 SYNE3Q6ZMZ3 975 aa16.17■□□□□ 0.18
SEC13-204ENST00000397099 NFXL1Q6ZNB6 911 aa16.17■□□□□ 0.18
SEC13-204ENST00000397099 CHST3Q7LGC8 479 aa16.17■□□□□ 0.18
SEC13-204ENST00000397099 ANKRD33Q7Z3H0 272 aa16.17■□□□□ 0.18
SEC13-204ENST00000397099 SGMS1Q86VZ5 419 aa16.17■□□□□ 0.18
SEC13-204ENST00000397099 ZNF654Q8IZM8 581 aa16.17■□□□□ 0.18
SEC13-204ENST00000397099 NEK1Q96PY6 1258 aa16.17■□□□□ 0.18
SEC13-204ENST00000397099 SPZ1Q9BXG8 430 aa16.17■□□□□ 0.18
SEC13-204ENST00000397099 DCDC2CA8MYV0 355 aa16.16■□□□□ 0.18
SEC13-204ENST00000397099 SH2B2O14492 632 aaPredicted RBP16.16■□□□□ 0.18
SEC13-204ENST00000397099 CPT1AP50416 773 aa16.16■□□□□ 0.18
SEC13-204ENST00000397099 PPP2R5BQ15173 497 aa16.16■□□□□ 0.18
SEC13-204ENST00000397099 FSCN1Q16658 493 aaKnown RBP16.16■□□□□ 0.18
SEC13-204ENST00000397099 FBXO16Q8IX29 292 aaPredicted RBP16.16■□□□□ 0.18
SEC13-204ENST00000397099 DEFB123Q8N688 67 aa16.16■□□□□ 0.18
SEC13-204ENST00000397099 SYTL5Q8TDW5 730 aaPredicted RBP16.16■□□□□ 0.18
SEC13-204ENST00000397099 BADQ92934 168 aa16.16■□□□□ 0.18
SEC13-204ENST00000397099 VTI1AQ96AJ9 217 aa16.16■□□□□ 0.18
SEC13-204ENST00000397099 RMDN3Q96TC7 470 aa16.16■□□□□ 0.18
SEC13-204ENST00000397099 WDR11Q9BZH6 1224 aa16.16■□□□□ 0.18
SEC13-204ENST00000397099 PDLIM7Q9NR12 457 aa16.16■□□□□ 0.18
SEC13-204ENST00000397099 PPP4R2Q9NY27 417 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms