RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 SPP2Q13103 211 aa13.3□□□□□ -0.28
ATN1-202ENST00000396684 GADL1Q6ZQY3 521 aa13.3□□□□□ -0.28
ATN1-202ENST00000396684 GPBP1Q86WP2 473 aa13.3□□□□□ -0.28
ATN1-202ENST00000396684 SCAF8Q9UPN6 1271 aaKnown RBP13.3□□□□□ -0.28
ATN1-202ENST00000396684 ANKRD36CQ5JPF3 1778 aa13.3□□□□□ -0.28
ATN1-202ENST00000396684 TESPA1A2RU30 521 aaPredicted RBP13.3□□□□□ -0.28
ATN1-202ENST00000396684 KIAA1024Q9UPX6 916 aa13.3□□□□□ -0.28
ATN1-202ENST00000396684 LRCH2Q5VUJ6 765 aa13.3□□□□□ -0.28
ATN1-202ENST00000396684 SPATA1Q5VX52 437 aa13.3□□□□□ -0.28
ATN1-202ENST00000396684 SLF1Q9BQI6 1058 aa13.3□□□□□ -0.28
ATN1-202ENST00000396684 CYP4A11Q02928 519 aa13.29□□□□□ -0.28
ATN1-202ENST00000396684 CETN1Q12798 172 aa13.29□□□□□ -0.28
ATN1-202ENST00000396684 PTPAQ15257 358 aa13.29□□□□□ -0.28
ATN1-202ENST00000396684 TDRD12Q587J7 1177 aaKnown RBP13.29□□□□□ -0.28
ATN1-202ENST00000396684 ZHX2Q9Y6X8 837 aa13.29□□□□□ -0.28
ATN1-202ENST00000396684 SHANK3Q9BYB0 1731 aa13.29□□□□□ -0.28
ATN1-202ENST00000396684 ESYT2A0FGR8 921 aa13.29□□□□□ -0.28
ATN1-202ENST00000396684 ZFPM1Q8IX07 1006 aa13.29□□□□□ -0.28
ATN1-202ENST00000396684 PRPF38AQ8NAV1 312 aaKnown RBP13.29□□□□□ -0.28
ATN1-202ENST00000396684 TEKT3Q9BXF9 490 aa13.29□□□□□ -0.28
ATN1-202ENST00000396684 TBC1D7Q9P0N9 293 aa13.29□□□□□ -0.28
ATN1-202ENST00000396684 GOLGA6L9A6NEM1 432 aa13.29□□□□□ -0.28
ATN1-202ENST00000396684 ARHGAP4P98171 946 aa13.29□□□□□ -0.28
ATN1-202ENST00000396684 PAXIP1Q6ZW49 1069 aaPredicted RBP13.29□□□□□ -0.28
ATN1-202ENST00000396684 NLRX1Q86UT6 975 aa13.29□□□□□ -0.28
ATN1-202ENST00000396684 IGSF22Q8N9C0 903 aa13.29□□□□□ -0.28
ATN1-202ENST00000396684 PAGR1Q9BTK6 254 aa13.29□□□□□ -0.28
ATN1-202ENST00000396684 DEFB129Q9H1M3 183 aa13.29□□□□□ -0.28
ATN1-202ENST00000396684 VCPKMTQ9H867 229 aa13.29□□□□□ -0.28
ATN1-202ENST00000396684 MMRN2Q9H8L6 949 aa13.29□□□□□ -0.28
ATN1-202ENST00000396684 NHSQ6T4R5 1651 aa13.29□□□□□ -0.28
ATN1-202ENST00000396684 RPL13P26373 211 aaKnown RBP13.28□□□□□ -0.28
ATN1-202ENST00000396684 IREB2P48200 963 aaKnown RBP13.28□□□□□ -0.28
ATN1-202ENST00000396684 SNW1Q13573 536 aaKnown RBP13.28□□□□□ -0.28
ATN1-202ENST00000396684 ANGEL2Q5VTE6 544 aaKnown RBP13.28□□□□□ -0.28
ATN1-202ENST00000396684 MIER3Q7Z3K6 550 aa13.28□□□□□ -0.28
ATN1-202ENST00000396684 ILDR1Q86SU0 546 aaPredicted RBP13.28□□□□□ -0.28
ATN1-202ENST00000396684 POTEDQ86YR6 584 aa13.28□□□□□ -0.28
ATN1-202ENST00000396684 SMYD4Q8IYR2 804 aaPredicted RBP13.28□□□□□ -0.28
ATN1-202ENST00000396684 NOC4LQ9BVI4 516 aaKnown RBP13.28□□□□□ -0.28
ATN1-202ENST00000396684 TAB2Q9NYJ8 693 aa13.28□□□□□ -0.28
ATN1-202ENST00000396684 TDP2O95551 362 aa13.28□□□□□ -0.28
ATN1-202ENST00000396684 MMP14P50281 582 aa13.28□□□□□ -0.28
ATN1-202ENST00000396684 NBPF9Q3BBW0 867 aa13.28□□□□□ -0.28
ATN1-202ENST00000396684 ENGASEQ8NFI3 743 aa13.28□□□□□ -0.28
ATN1-202ENST00000396684 RABGAP1Q9Y3P9 1069 aa13.28□□□□□ -0.28
ATN1-202ENST00000396684 KIF5CO60282 957 aa13.28□□□□□ -0.28
ATN1-202ENST00000396684 DKC1O60832 514 aaKnown RBP eCLIP13.28□□□□□ -0.28
ATN1-202ENST00000396684 VIL1P09327 827 aaKnown RBP13.28□□□□□ -0.28
ATN1-202ENST00000396684 PRPHP41219 470 aa13.28□□□□□ -0.28
ATN1-202ENST00000396684 RASSF7Q02833 373 aa13.28□□□□□ -0.28
ATN1-202ENST00000396684 TBC1D8BQ0IIM8 1120 aa13.28□□□□□ -0.28
ATN1-202ENST00000396684 MORC3Q14149 939 aa13.28□□□□□ -0.28
ATN1-202ENST00000396684 SPDYE2Q495Y8 402 aa13.28□□□□□ -0.28
ATN1-202ENST00000396684 CNGA4Q8IV77 575 aa13.28□□□□□ -0.28
ATN1-202ENST00000396684 ANKRD35Q8N283 1001 aa13.28□□□□□ -0.28
ATN1-202ENST00000396684 DAGLBQ8NCG7 672 aa13.28□□□□□ -0.28
ATN1-202ENST00000396684 SRRTQ9BXP5 876 aaKnown RBP13.28□□□□□ -0.28
ATN1-202ENST00000396684 FAM198AQ9UFP1 575 aa13.28□□□□□ -0.28
ATN1-202ENST00000396684 TOB1P50616 345 aaPredicted RBP13.27□□□□□ -0.28
ATN1-202ENST00000396684 CHMP4BP1P59074 171 aa13.27□□□□□ -0.28
ATN1-202ENST00000396684 ENOX2Q16206 610 aaKnown RBP13.27□□□□□ -0.28
ATN1-202ENST00000396684 GNPTABQ3T906 1256 aa13.27□□□□□ -0.28
ATN1-202ENST00000396684 FAM83AQ86UY5 434 aa13.27□□□□□ -0.28
ATN1-202ENST00000396684 ZNF577Q9BSK1 485 aa13.27□□□□□ -0.28
ATN1-202ENST00000396684 PRR12Q9ULL5 1215 aa13.27□□□□□ -0.28
ATN1-202ENST00000396684 PCDHAC2Q9Y5I4 1007 aa13.27□□□□□ -0.28
ATN1-202ENST00000396684 AKR1B15C9JRZ8 316 aaPredicted RBP13.27□□□□□ -0.28
ATN1-202ENST00000396684 PABPC4Q13310 644 aaKnown RBP eCLIP13.27□□□□□ -0.28
ATN1-202ENST00000396684 CAGE1Q8TC20 777 aa13.27□□□□□ -0.28
ATN1-202ENST00000396684 POTEMA6NI47 508 aa13.27□□□□□ -0.29
ATN1-202ENST00000396684 LMNB1P20700 586 aa13.27□□□□□ -0.29
ATN1-202ENST00000396684 ZNF658Q5TYW1 1059 aaPredicted RBP13.27□□□□□ -0.29
ATN1-202ENST00000396684 BICD1Q96G01 975 aa13.27□□□□□ -0.29
ATN1-202ENST00000396684 WDR11Q9BZH6 1224 aa13.27□□□□□ -0.29
ATN1-202ENST00000396684 SLC39A2Q9NP94 309 aa13.27□□□□□ -0.29
ATN1-202ENST00000396684 GGA3Q9NZ52 723 aa13.27□□□□□ -0.29
ATN1-202ENST00000396684 HACL1Q9UJ83 578 aa13.27□□□□□ -0.29
ATN1-202ENST00000396684 LUC7L2Q9Y383 392 aaKnown RBP13.27□□□□□ -0.29
ATN1-202ENST00000396684 ABCB11O95342 1321 aa13.27□□□□□ -0.29
ATN1-202ENST00000396684 PP2D1A8MPX8 630 aa13.27□□□□□ -0.29
ATN1-202ENST00000396684 CETN3O15182 167 aa13.27□□□□□ -0.29
ATN1-202ENST00000396684 USP49Q70CQ1 688 aa13.27□□□□□ -0.29
ATN1-202ENST00000396684 NELFCDQ8IXH7 590 aa13.27□□□□□ -0.29
ATN1-202ENST00000396684 MYOCDQ8IZQ8 938 aa13.27□□□□□ -0.29
ATN1-202ENST00000396684 ENOX1Q8TC92 643 aaKnown RBP13.27□□□□□ -0.29
ATN1-202ENST00000396684 SMCR8Q8TEV9 937 aaPredicted RBP13.27□□□□□ -0.29
ATN1-202ENST00000396684 LPAR1Q92633 364 aa13.27□□□□□ -0.29
ATN1-202ENST00000396684 PDGFDQ9GZP0 370 aaPredicted RBP13.27□□□□□ -0.29
ATN1-202ENST00000396684 RIOX1Q9H6W3 641 aa13.27□□□□□ -0.29
ATN1-202ENST00000396684 UQCRHLA0A096LP55 91 aa13.26□□□□□ -0.29
ATN1-202ENST00000396684 UQCRHP07919 91 aa13.26□□□□□ -0.29
ATN1-202ENST00000396684 MCM6Q14566 821 aa13.26□□□□□ -0.29
ATN1-202ENST00000396684 CT47A1Q5JQC4 288 aaPredicted RBP13.26□□□□□ -0.29
ATN1-202ENST00000396684 FAM26FQ5R3K3 315 aa13.26□□□□□ -0.29
ATN1-202ENST00000396684 SPECC1LQ69YQ0 1117 aa13.26□□□□□ -0.29
ATN1-202ENST00000396684 VPS36Q86VN1 386 aa13.26□□□□□ -0.29
ATN1-202ENST00000396684 METTL16Q86W50 562 aaKnown RBP13.26□□□□□ -0.29
ATN1-202ENST00000396684 MYCT1Q8N699 235 aa13.26□□□□□ -0.29
ATN1-202ENST00000396684 PDCL3Q9H2J4 239 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms