RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 FDX1P10109 184 aa14.47□□□□□ -0.09
TRIM39-204ENST00000396548 CCDC73Q6ZRK6 1079 aa14.47□□□□□ -0.09
TRIM39-204ENST00000396548 USP49Q70CQ1 688 aa14.47□□□□□ -0.09
TRIM39-204ENST00000396548 ERO1BQ86YB8 467 aa14.47□□□□□ -0.09
TRIM39-204ENST00000396548 TBC1D5Q92609 795 aa14.47□□□□□ -0.09
TRIM39-204ENST00000396548 TIGD1Q96MW7 591 aa14.47□□□□□ -0.09
TRIM39-204ENST00000396548 NUP62CLQ9H1M0 184 aa14.47□□□□□ -0.09
TRIM39-204ENST00000396548 FLOT1O75955 427 aa14.47□□□□□ -0.09
TRIM39-204ENST00000396548 ZNF202O95125 648 aa14.47□□□□□ -0.09
TRIM39-204ENST00000396548 HSD17B4P51659 736 aa14.47□□□□□ -0.09
TRIM39-204ENST00000396548 ANO3Q9BYT9 981 aa14.47□□□□□ -0.09
TRIM39-204ENST00000396548 MYPNQ86TC9 1320 aa14.47□□□□□ -0.09
TRIM39-204ENST00000396548 IRF6O14896 467 aa14.46□□□□□ -0.09
TRIM39-204ENST00000396548 CCNT1O60563 726 aaKnown RBP14.46□□□□□ -0.09
TRIM39-204ENST00000396548 PPIL2Q13356 520 aa14.46□□□□□ -0.09
TRIM39-204ENST00000396548 LETM2Q2VYF4 491 aa14.46□□□□□ -0.09
TRIM39-204ENST00000396548 SPECC1Q5M775 1068 aa14.46□□□□□ -0.09
TRIM39-204ENST00000396548 ELOA2Q8IYF1 753 aaPredicted RBP14.46□□□□□ -0.09
TRIM39-204ENST00000396548 TRPM7Q96QT4 1865 aa14.46□□□□□ -0.09
TRIM39-204ENST00000396548 LCTP09848 1927 aa14.46□□□□□ -0.09
TRIM39-204ENST00000396548 A0A087X0B3 334 aa14.46□□□□□ -0.09
TRIM39-204ENST00000396548 ATP2A1O14983 1001 aa14.46□□□□□ -0.09
TRIM39-204ENST00000396548 SLC37A4O43826 429 aa14.46□□□□□ -0.09
TRIM39-204ENST00000396548 GJA5P36382 358 aa14.46□□□□□ -0.09
TRIM39-204ENST00000396548 SREBF1P36956 1147 aa14.46□□□□□ -0.09
TRIM39-204ENST00000396548 USP11P51784 963 aa14.46□□□□□ -0.09
TRIM39-204ENST00000396548 TREML2Q5T2D2 321 aa14.46□□□□□ -0.09
TRIM39-204ENST00000396548 ATG4CQ96DT6 458 aa14.46□□□□□ -0.09
TRIM39-204ENST00000396548 MRPL11Q9Y3B7 192 aaKnown RBP14.46□□□□□ -0.09
TRIM39-204ENST00000396548 CXCL11O14625 94 aa14.46□□□□□ -0.1
TRIM39-204ENST00000396548 TDP2O95551 362 aa14.46□□□□□ -0.1
TRIM39-204ENST00000396548 HOXA7P31268 230 aaPredicted RBP14.46□□□□□ -0.1
TRIM39-204ENST00000396548 CAMK4Q16566 473 aa14.46□□□□□ -0.1
TRIM39-204ENST00000396548 MOXD1Q6UVY6 613 aa14.46□□□□□ -0.1
TRIM39-204ENST00000396548 KCNH3Q9ULD8 1083 aa14.46□□□□□ -0.1
TRIM39-204ENST00000396548 FOSP01100 380 aaPredicted RBP14.45□□□□□ -0.1
TRIM39-204ENST00000396548 CYP3A4P08684 503 aa14.45□□□□□ -0.1
TRIM39-204ENST00000396548 OAZ1P54368 228 aa14.45□□□□□ -0.1
TRIM39-204ENST00000396548 COG2Q14746 738 aa14.45□□□□□ -0.1
TRIM39-204ENST00000396548 ARMC9Q7Z3E5 817 aa14.45□□□□□ -0.1
TRIM39-204ENST00000396548 PROCA1Q8NCQ7 364 aaPredicted RBP14.45□□□□□ -0.1
TRIM39-204ENST00000396548 TMOD4Q9NZQ9 345 aa14.45□□□□□ -0.1
TRIM39-204ENST00000396548 ZNF214Q9UL59 606 aaPredicted RBP14.45□□□□□ -0.1
TRIM39-204ENST00000396548 LONP1P36776 959 aaKnown RBP14.45□□□□□ -0.1
TRIM39-204ENST00000396548 MDM2Q00987 491 aaPredicted RBP14.45□□□□□ -0.1
TRIM39-204ENST00000396548 POTEDQ86YR6 584 aa14.45□□□□□ -0.1
TRIM39-204ENST00000396548 EPSTI1Q96J88 318 aa14.45□□□□□ -0.1
TRIM39-204ENST00000396548 CCPG1Q9ULG6 757 aa14.45□□□□□ -0.1
TRIM39-204ENST00000396548 SPDYE16A6NNV3 312 aaPredicted RBP14.44□□□□□ -0.1
TRIM39-204ENST00000396548 NEMFO60524 1076 aa14.44□□□□□ -0.1
TRIM39-204ENST00000396548 TNMDQ9H2S6 317 aa14.44□□□□□ -0.1
TRIM39-204ENST00000396548 RAVER2Q9HCJ3 691 aaKnown RBP14.44□□□□□ -0.1
TRIM39-204ENST00000396548 NMRK2Q9NPI5 230 aa14.44□□□□□ -0.1
TRIM39-204ENST00000396548 CLEC11AQ9Y240 323 aa14.44□□□□□ -0.1
TRIM39-204ENST00000396548 VWA3AA6NCI4 1184 aa14.44□□□□□ -0.1
TRIM39-204ENST00000396548 HOXA13P31271 388 aaPredicted RBP14.44□□□□□ -0.1
TRIM39-204ENST00000396548 CIITAP33076 1130 aa14.44□□□□□ -0.1
TRIM39-204ENST00000396548 SYKP43405 635 aa14.44□□□□□ -0.1
TRIM39-204ENST00000396548 LONRF3Q496Y0 759 aa14.44□□□□□ -0.1
TRIM39-204ENST00000396548 MUM1L1Q5H9M0 696 aa14.44□□□□□ -0.1
TRIM39-204ENST00000396548 SYMPKQ92797 1274 aaKnown RBP14.44□□□□□ -0.1
TRIM39-204ENST00000396548 HAS1Q92839 578 aa14.44□□□□□ -0.1
TRIM39-204ENST00000396548 LENG9Q96B70 501 aa14.44□□□□□ -0.1
TRIM39-204ENST00000396548 FRMPD4Q14CM0 1322 aa14.44□□□□□ -0.1
TRIM39-204ENST00000396548 RPTORQ8N122 1335 aa14.44□□□□□ -0.1
TRIM39-204ENST00000396548 CTAGE5O15320 804 aa14.44□□□□□ -0.1
TRIM39-204ENST00000396548 ACTN4O43707 911 aaKnown RBP14.44□□□□□ -0.1
TRIM39-204ENST00000396548 OR52Z1P0C646 297 aa14.44□□□□□ -0.1
TRIM39-204ENST00000396548 GCFC2P16383 781 aaKnown RBP14.44□□□□□ -0.1
TRIM39-204ENST00000396548 TMEM132BQ14DG7 1078 aa14.44□□□□□ -0.1
TRIM39-204ENST00000396548 SAMD3Q8N6K7 520 aa14.44□□□□□ -0.1
TRIM39-204ENST00000396548 OPTNQ96CV9 577 aa14.44□□□□□ -0.1
TRIM39-204ENST00000396548 OTUD5Q96G74 571 aa14.44□□□□□ -0.1
TRIM39-204ENST00000396548 PNMA2Q9UL42 364 aa14.44□□□□□ -0.1
TRIM39-204ENST00000396548 ZBED4O75132 1171 aa14.43□□□□□ -0.1
TRIM39-204ENST00000396548 ARHGAP4P98171 946 aa14.43□□□□□ -0.1
TRIM39-204ENST00000396548 E2F4Q16254 413 aa14.43□□□□□ -0.1
TRIM39-204ENST00000396548 Q4G0T1 1027 aa14.43□□□□□ -0.1
TRIM39-204ENST00000396548 LBX2Q6XYB7 198 aa14.43□□□□□ -0.1
TRIM39-204ENST00000396548 IGSF22Q8N9C0 903 aa14.43□□□□□ -0.1
TRIM39-204ENST00000396548 RIPK3Q9Y572 518 aa14.43□□□□□ -0.1
TRIM39-204ENST00000396548 GCOM1H8Y6P7 765 aaPredicted RBP14.43□□□□□ -0.1
TRIM39-204ENST00000396548 NFIBO00712 420 aa14.43□□□□□ -0.1
TRIM39-204ENST00000396548 KINO60870 393 aaKnown RBP14.43□□□□□ -0.1
TRIM39-204ENST00000396548 ITGBL1O95965 494 aaPredicted RBP14.43□□□□□ -0.1
TRIM39-204ENST00000396548 POLR2MP0CAP2 368 aa14.43□□□□□ -0.1
TRIM39-204ENST00000396548 FKBP1BP68106 108 aa14.43□□□□□ -0.1
TRIM39-204ENST00000396548 GPAT2Q6NUI2 795 aa14.43□□□□□ -0.1
TRIM39-204ENST00000396548 NAP1L4Q99733 375 aaKnown RBP14.43□□□□□ -0.1
TRIM39-204ENST00000396548 KCNMB3Q9NPA1 279 aa14.43□□□□□ -0.1
TRIM39-204ENST00000396548 MAP3K20Q9NYL2 800 aaKnown RBP14.43□□□□□ -0.1
TRIM39-204ENST00000396548 COL20A1Q9P218 1284 aa14.43□□□□□ -0.1
TRIM39-204ENST00000396548 FXR2P51116 673 aaKnown RBP eCLIP14.42□□□□□ -0.1
TRIM39-204ENST00000396548 DTHD1Q6ZMT9 781 aa14.42□□□□□ -0.1
TRIM39-204ENST00000396548 KRBA2Q6ZNG9 492 aa14.42□□□□□ -0.1
TRIM39-204ENST00000396548 RBSNQ9H1K0 784 aa14.42□□□□□ -0.1
TRIM39-204ENST00000396548 HOXC10Q9NYD6 342 aa14.42□□□□□ -0.1
TRIM39-204ENST00000396548 FAM13BQ9NYF5 915 aa14.42□□□□□ -0.1
TRIM39-204ENST00000396548 SH3RF1Q7Z6J0 888 aa14.42□□□□□ -0.1
TRIM39-204ENST00000396548 CKAP2LQ8IYA6 745 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms