RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 SPON1Q9HCB6 807 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 KIAA1586Q9HCI6 787 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 PCDHA5Q9Y5H7 936 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 ZNF831Q5JPB2 1677 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.76□□□□□ -1.81
VPS13C-203ENST00000395896 BACH1O14867 736 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 UBXN1Q04323 297 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 SYCE1Q8N0S2 351 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 DPF2Q92785 391 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 C16orf45Q96MC5 204 aaPredicted RBP3.76□□□□□ -1.81
VPS13C-203ENST00000395896 BCS1LQ9Y276 419 aa3.76□□□□□ -1.81
VPS13C-203ENST00000395896 CRYBG1Q9Y4K1 1723 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 ANXA13P27216 316 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 GNG11P61952 73 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 KRT76Q01546 638 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 DMP1Q13316 513 aaPredicted RBP3.75□□□□□ -1.81
VPS13C-203ENST00000395896 GMCL1Q96IK5 515 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 TCHPQ9BT92 498 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 TEKT3Q9BXF9 490 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 BRPF3Q9ULD4 1205 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 CCDC66A2RUB6 948 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 TMEM232C9JQI7 657 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 TXKP42681 527 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 SNRPFP62306 86 aaKnown RBP3.75□□□□□ -1.81
VPS13C-203ENST00000395896 CCDC186Q7Z3E2 898 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 CCDC170Q8IYT3 715 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 DAGLBQ8NCG7 672 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 TEX13BQ9BXU2 312 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 ZSWIM4Q9H7M6 989 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 GPCPD1Q9NPB8 672 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 FEM1BQ9UK73 627 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.75□□□□□ -1.81
VPS13C-203ENST00000395896 GRIN3BO60391 1043 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 ACTN2P35609 894 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 DDIT3P35638 169 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 JAK3P52333 1124 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 INF2Q27J81 1249 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 ZFYVE27Q5T4F4 411 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 RESP18Q5W5W9 173 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 FOXR2Q6PJQ5 311 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 LUZP1Q86V48 1076 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 GUF1Q8N442 669 aaKnown RBP3.75□□□□□ -1.81
VPS13C-203ENST00000395896 BBXQ8WY36 941 aaPredicted RBP3.75□□□□□ -1.81
VPS13C-203ENST00000395896 NOC4LQ9BVI4 516 aaKnown RBP3.75□□□□□ -1.81
VPS13C-203ENST00000395896 CD2APQ9Y5K6 639 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 CABIN1Q9Y6J0 2220 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 SDK1Q7Z5N4 2213 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 GBP1P32455 592 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 FAM26FQ5R3K3 315 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 LRCH2Q5VUJ6 765 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 TTC39CQ8N584 583 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 IGSF22Q8N9C0 903 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 JAKMIP2Q96AA8 810 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 PITPNM2Q9BZ72 1349 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 SCARF1Q14162 830 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 ZNF658Q5TYW1 1059 aaPredicted RBP3.75□□□□□ -1.81
VPS13C-203ENST00000395896 PDLIM2Q96JY6 352 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 PARVGQ9HBI0 331 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 LCMT1Q9UIC8 334 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 RWDD2AQ9UIY3 292 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 KIAA0391O15091 583 aaKnown RBP3.75□□□□□ -1.81
VPS13C-203ENST00000395896 WDR46O15213 610 aaKnown RBP3.75□□□□□ -1.81
VPS13C-203ENST00000395896 GAS2O43903 313 aaKnown RBP3.75□□□□□ -1.81
VPS13C-203ENST00000395896 CASQ1P31415 396 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 FASTKD5Q7L8L6 764 aaKnown RBP3.75□□□□□ -1.81
VPS13C-203ENST00000395896 ANKRD35Q8N283 1001 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 GPT2Q8TD30 523 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 NOX5Q96PH1 765 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 PANK2Q9BZ23 570 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 STRCP1A6NGW2 1772 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 USP17L5A8MUK1 530 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 ECE2O60344 883 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 PKP1Q13835 747 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 KCTD2Q14681 263 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 FGRP09769 529 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 KRT9P35527 623 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 BPIFB4P59827 614 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 ZNF174Q15697 407 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 PNMA8AQ86V59 439 aaPredicted RBP3.75□□□□□ -1.81
VPS13C-203ENST00000395896 FAM167AQ96KS9 214 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 FNBP1Q96RU3 617 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 MRPL44Q9H9J2 332 aaKnown RBP3.75□□□□□ -1.81
VPS13C-203ENST00000395896 YWHAEP62258 255 aaKnown RBP3.75□□□□□ -1.81
VPS13C-203ENST00000395896 CEP55Q53EZ4 464 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 SYMPKQ92797 1274 aaKnown RBP3.75□□□□□ -1.81
VPS13C-203ENST00000395896 BRWD1Q9NSI6 2320 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 IFNKQ9P0W0 207 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 CCPG1Q9ULG6 757 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 ATP2A1O14983 1001 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 TGFB3P10600 412 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 STAT1P42224 750 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 STRN3Q13033 797 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 FAM47AQ5JRC9 791 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 CEP135Q66GS9 1140 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 HOOK3Q86VS8 718 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 RDM1Q8NG50 284 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 TBCKQ8TEA7 893 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 UBA5Q9GZZ9 404 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 DBNDD1Q9H9R9 158 aa3.75□□□□□ -1.81
VPS13C-203ENST00000395896 JADE2Q9NQC1 790 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms