RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 KIF11P52732 1056 aa15.91■□□□□ 0.14
CLIP2-203ENST00000395060 VAV2P52735 878 aa15.91■□□□□ 0.14
CLIP2-203ENST00000395060 LRRC41Q15345 812 aa15.91■□□□□ 0.14
CLIP2-203ENST00000395060 LETM2Q2VYF4 491 aa15.91■□□□□ 0.14
CLIP2-203ENST00000395060 SUSD4Q5VX71 490 aa15.91■□□□□ 0.14
CLIP2-203ENST00000395060 MCTP2Q6DN12 878 aa15.91■□□□□ 0.14
CLIP2-203ENST00000395060 TTI2Q6NXR4 508 aa15.91■□□□□ 0.14
CLIP2-203ENST00000395060 RNPC3Q96LT9 517 aaKnown RBP15.91■□□□□ 0.14
CLIP2-203ENST00000395060 VAT1LQ9HCJ6 419 aa15.91■□□□□ 0.14
CLIP2-203ENST00000395060 CD248Q9HCU0 757 aa15.91■□□□□ 0.14
CLIP2-203ENST00000395060 TARSL2A2RTX5 802 aaKnown RBP15.91■□□□□ 0.14
CLIP2-203ENST00000395060 USO1O60763 962 aaKnown RBP15.91■□□□□ 0.14
CLIP2-203ENST00000395060 BMP15O95972 392 aa15.91■□□□□ 0.14
CLIP2-203ENST00000395060 GLI1P08151 1106 aa15.91■□□□□ 0.14
CLIP2-203ENST00000395060 SRGNP10124 158 aa15.91■□□□□ 0.14
CLIP2-203ENST00000395060 KLHL7Q8IXQ5 586 aa15.91■□□□□ 0.14
CLIP2-203ENST00000395060 MSL3Q8N5Y2 521 aaKnown RBP15.91■□□□□ 0.14
CLIP2-203ENST00000395060 OR2W6PQ8NHA6 318 aa15.91■□□□□ 0.14
CLIP2-203ENST00000395060 ZBED6P86452 979 aa15.9■□□□□ 0.14
CLIP2-203ENST00000395060 CCDC24Q8N4L8 307 aa15.9■□□□□ 0.14
CLIP2-203ENST00000395060 MYH13Q9UKX3 1938 aa15.9■□□□□ 0.14
CLIP2-203ENST00000395060 MAGEA1P43355 309 aa15.9■□□□□ 0.14
CLIP2-203ENST00000395060 CHRNDQ07001 517 aa15.9■□□□□ 0.14
CLIP2-203ENST00000395060 DDB1Q16531 1140 aa15.9■□□□□ 0.14
CLIP2-203ENST00000395060 HAUS3Q68CZ6 603 aa15.9■□□□□ 0.14
CLIP2-203ENST00000395060 BLIDQ8IZY5 108 aa15.9■□□□□ 0.14
CLIP2-203ENST00000395060 ZNF512BQ96KM6 892 aaPredicted RBP15.9■□□□□ 0.14
CLIP2-203ENST00000395060 STIM2Q9P246 746 aa15.9■□□□□ 0.14
CLIP2-203ENST00000395060 LRRC53A6NM62 1247 aa15.9■□□□□ 0.14
CLIP2-203ENST00000395060 TECP42680 631 aa15.9■□□□□ 0.14
CLIP2-203ENST00000395060 PAFAH1B1P43034 410 aa15.9■□□□□ 0.14
CLIP2-203ENST00000395060 CT47A1Q5JQC4 288 aaPredicted RBP15.9■□□□□ 0.14
CLIP2-203ENST00000395060 IQCEQ6IPM2 695 aa15.9■□□□□ 0.14
CLIP2-203ENST00000395060 BICDL1Q6ZP65 573 aa15.9■□□□□ 0.14
CLIP2-203ENST00000395060 KRT12Q99456 494 aa15.9■□□□□ 0.14
CLIP2-203ENST00000395060 MROH5Q6ZUA9 1318 aa15.89■□□□□ 0.13
CLIP2-203ENST00000395060 KCNQ2O43526 872 aa15.89■□□□□ 0.13
CLIP2-203ENST00000395060 KLRC4O43908 158 aa15.89■□□□□ 0.13
CLIP2-203ENST00000395060 ECM2O94769 699 aaPredicted RBP15.89■□□□□ 0.13
CLIP2-203ENST00000395060 EEF1GP26641 437 aaKnown RBP15.89■□□□□ 0.13
CLIP2-203ENST00000395060 SLC1A4P43007 532 aa15.89■□□□□ 0.13
CLIP2-203ENST00000395060 IFT88Q13099 833 aa15.89■□□□□ 0.13
CLIP2-203ENST00000395060 HLTFQ14527 1009 aaKnown RBP eCLIP15.89■□□□□ 0.13
CLIP2-203ENST00000395060 CFAP58Q5T655 872 aa15.89■□□□□ 0.13
CLIP2-203ENST00000395060 MTMR8Q96EF0 704 aa15.89■□□□□ 0.13
CLIP2-203ENST00000395060 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.89■□□□□ 0.13
CLIP2-203ENST00000395060 SPEF2Q9C093 1822 aa15.89■□□□□ 0.13
CLIP2-203ENST00000395060 PARP4Q9UKK3 1724 aaKnown RBP15.89■□□□□ 0.13
CLIP2-203ENST00000395060 HEXIM1O94992 359 aaKnown RBP15.89■□□□□ 0.13
CLIP2-203ENST00000395060 IGHMBP2P38935 993 aaKnown RBP15.89■□□□□ 0.13
CLIP2-203ENST00000395060 TXNRD1Q16881 649 aa15.89■□□□□ 0.13
CLIP2-203ENST00000395060 CACNA2D4Q7Z3S7 1137 aa15.89■□□□□ 0.13
CLIP2-203ENST00000395060 GLIS3Q8NEA6 775 aa15.89■□□□□ 0.13
CLIP2-203ENST00000395060 P2RX5Q93086 422 aa15.89■□□□□ 0.13
CLIP2-203ENST00000395060 MYCBPQ99417 103 aaPredicted RBP15.89■□□□□ 0.13
CLIP2-203ENST00000395060 MYH7P12883 1935 aa15.88■□□□□ 0.13
CLIP2-203ENST00000395060 SHOX2O60902 331 aaPredicted RBP15.88■□□□□ 0.13
CLIP2-203ENST00000395060 ACTN3Q08043 901 aaPredicted RBP15.88■□□□□ 0.13
CLIP2-203ENST00000395060 TRIM58Q8NG06 486 aa15.88■□□□□ 0.13
CLIP2-203ENST00000395060 NCAPGQ9BPX3 1015 aa15.88■□□□□ 0.13
CLIP2-203ENST00000395060 OPA1O60313 960 aa15.88■□□□□ 0.13
CLIP2-203ENST00000395060 CRKLP46109 303 aaKnown RBP15.88■□□□□ 0.13
CLIP2-203ENST00000395060 AMOTL1Q8IY63 956 aa15.88■□□□□ 0.13
CLIP2-203ENST00000395060 DYNLL2Q96FJ2 89 aa15.88■□□□□ 0.13
CLIP2-203ENST00000395060 SH2D4AQ9H788 454 aa15.88■□□□□ 0.13
CLIP2-203ENST00000395060 TFCP2L1Q9NZI6 479 aa15.88■□□□□ 0.13
CLIP2-203ENST00000395060 TBC1D7Q9P0N9 293 aa15.88■□□□□ 0.13
CLIP2-203ENST00000395060 MYH2Q9UKX2 1941 aa15.88■□□□□ 0.13
CLIP2-203ENST00000395060 BCL9O00512 1426 aa15.88■□□□□ 0.13
CLIP2-203ENST00000395060 A0A1W2PQC6 194 aa15.88■□□□□ 0.13
CLIP2-203ENST00000395060 E7EVH7 732 aa15.88■□□□□ 0.13
CLIP2-203ENST00000395060 CCNT1O60563 726 aaKnown RBP15.88■□□□□ 0.13
CLIP2-203ENST00000395060 MEA1Q16626 185 aa15.88■□□□□ 0.13
CLIP2-203ENST00000395060 MIIPQ5JXC2 388 aa15.88■□□□□ 0.13
CLIP2-203ENST00000395060 RPGRIP1Q96KN7 1286 aa15.88■□□□□ 0.13
CLIP2-203ENST00000395060 TTYH3Q9C0H2 523 aa15.88■□□□□ 0.13
CLIP2-203ENST00000395060 THAP9Q9H5L6 903 aa15.88■□□□□ 0.13
CLIP2-203ENST00000395060 RBM28Q9NW13 759 aaKnown RBP15.88■□□□□ 0.13
CLIP2-203ENST00000395060 STX8Q9UNK0 236 aa15.88■□□□□ 0.13
CLIP2-203ENST00000395060 NIP7Q9Y221 180 aaKnown RBP eCLIP15.88■□□□□ 0.13
CLIP2-203ENST00000395060 LAMB4A4D0S4 1761 aa15.87■□□□□ 0.13
CLIP2-203ENST00000395060 KLRK1P26718 216 aa15.87■□□□□ 0.13
CLIP2-203ENST00000395060 HDLBPQ00341 1268 aaKnown RBP15.87■□□□□ 0.13
CLIP2-203ENST00000395060 EHHADHQ08426 723 aa15.87■□□□□ 0.13
CLIP2-203ENST00000395060 CABP7Q86V35 215 aa15.87■□□□□ 0.13
CLIP2-203ENST00000395060 ALS2CR12Q96Q35 445 aa15.87■□□□□ 0.13
CLIP2-203ENST00000395060 USP17L3A6NCW0 530 aa15.87■□□□□ 0.13
CLIP2-203ENST00000395060 USP17L4A6NCW7 530 aa15.87■□□□□ 0.13
CLIP2-203ENST00000395060 GOLGA8KD6RF30 607 aa15.87■□□□□ 0.13
CLIP2-203ENST00000395060 LONP1P36776 959 aaKnown RBP15.87■□□□□ 0.13
CLIP2-203ENST00000395060 USP17L1Q7RTZ2 530 aa15.87■□□□□ 0.13
CLIP2-203ENST00000395060 DDX42Q86XP3 938 aaKnown RBP eCLIP15.87■□□□□ 0.13
CLIP2-203ENST00000395060 GJA10Q969M2 543 aa15.87■□□□□ 0.13
CLIP2-203ENST00000395060 HYOU1Q9Y4L1 999 aa15.87■□□□□ 0.13
CLIP2-203ENST00000395060 PNPLA7Q6ZV29 1317 aa15.87■□□□□ 0.13
CLIP2-203ENST00000395060 ZNF233A6NK53 670 aa15.86■□□□□ 0.13
CLIP2-203ENST00000395060 USP17L8P0C7I0 530 aa15.86■□□□□ 0.13
CLIP2-203ENST00000395060 EPHB4P54760 987 aa15.86■□□□□ 0.13
CLIP2-203ENST00000395060 CEP85LQ5SZL2 805 aa15.86■□□□□ 0.13
CLIP2-203ENST00000395060 EP400NLQ6ZTU2 488 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms