RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 MAGEA1P43355 309 aa8.09□□□□□ -1.12
SYNE2-205ENST00000394768 AK2P54819 239 aa8.09□□□□□ -1.12
SYNE2-205ENST00000394768 DISC1Q9NRI5 854 aa8.09□□□□□ -1.12
SYNE2-205ENST00000394768 KRT8P05787 483 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 XKR9Q5GH70 373 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 ARMCX5Q6P1M9 558 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 MRRFQ96E11 262 aaKnown RBP8.08□□□□□ -1.12
SYNE2-205ENST00000394768 FAF1Q9UNN5 650 aaPredicted RBP8.08□□□□□ -1.12
SYNE2-205ENST00000394768 SPATA5Q8NB90 893 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 CEP19Q96LK0 163 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 ZBTB18Q99592 522 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 PAGR1Q9BTK6 254 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 MAGEB5Q9BZ81 275 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 DAAM1Q9Y4D1 1078 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 SEMA3EO15041 775 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 TRAIPQ9BWF2 469 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 SBNO2Q9Y2G9 1366 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 CPP00450 1065 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 PYGBP11216 843 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 TMED8Q6PL24 325 aaPredicted RBP8.08□□□□□ -1.12
SYNE2-205ENST00000394768 GPBP1Q86WP2 473 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 BICC1Q9H694 974 aaKnown RBP8.08□□□□□ -1.12
SYNE2-205ENST00000394768 PCDHA12Q9UN75 941 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 PRXQ9BXM0 1461 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 FRA10AC1Q70Z53 315 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 KDM4CQ9H3R0 1056 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 HPCAL4Q9UM19 191 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 SBNO1A3KN83 1393 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 ADGBQ8N7X0 1667 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 KRIT1O00522 736 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 MRPL46Q9H2W6 279 aaKnown RBP8.08□□□□□ -1.12
SYNE2-205ENST00000394768 MED4Q9NPJ6 270 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 TLK1Q9UKI8 766 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 GOLGA8TH3BQL2 631 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 GPAA1O43292 621 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 GOLGA8HP0CJ92 632 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 MX2P20592 715 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 CHST3Q7LGC8 479 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 GANCQ8TET4 914 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 CCDC17Q96LX7 622 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 GSDMAQ96QA5 445 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 TAC1P20366 129 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 CASP2P42575 452 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 IREB2P48200 963 aaKnown RBP8.08□□□□□ -1.12
SYNE2-205ENST00000394768 SYT10Q6XYQ8 523 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 TMEM206Q9H813 350 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 FGFR1OP2Q9NVK5 253 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 DNAJC17Q9NVM6 304 aaKnown RBP8.08□□□□□ -1.12
SYNE2-205ENST00000394768 BTG4Q9NY30 223 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 STX18Q9P2W9 335 aaKnown RBP8.08□□□□□ -1.12
SYNE2-205ENST00000394768 SUN2Q9UH99 717 aa8.08□□□□□ -1.12
SYNE2-205ENST00000394768 DDAH1O94760 285 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 BRD3Q15059 726 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 CDC37Q16543 378 aaPredicted RBP8.07□□□□□ -1.12
SYNE2-205ENST00000394768 CABP7Q86V35 215 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 OR9Q1Q8NGQ5 310 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 PRDM10Q9NQV6 1147 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 CCDC78A2IDD5 438 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 HNRNPDLO14979 420 aaKnown RBP8.07□□□□□ -1.12
SYNE2-205ENST00000394768 GFAPP14136 432 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 EPHB1P54762 984 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 TTC39CQ8N584 583 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 NDEL1Q9GZM8 345 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 MTIF3Q9H2K0 278 aaKnown RBP8.07□□□□□ -1.12
SYNE2-205ENST00000394768 POLE3Q9NRF9 147 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 AKT3Q9Y243 479 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 NPR1P16066 1061 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 TCP1P17987 556 aaKnown RBP8.07□□□□□ -1.12
SYNE2-205ENST00000394768 PRKCQQ04759 706 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 NCAPG2Q86XI2 1143 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 SIX6OS1Q8N1H7 587 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 AK8Q96MA6 479 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 TXLNGQ9NUQ3 528 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 DDX25Q9UHL0 483 aaKnown RBP8.07□□□□□ -1.12
SYNE2-205ENST00000394768 GCFC2P16383 781 aaKnown RBP8.07□□□□□ -1.12
SYNE2-205ENST00000394768 TRIM60Q495X7 471 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 THEM5Q8N1Q8 247 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 EPAS1Q99814 870 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 VPS16Q9H269 839 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 LRRIQ4A6NIV6 560 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 HOXD10P28358 340 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 ZNF263O14978 683 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 CERKLQ49MI3 558 aaPredicted RBP8.07□□□□□ -1.12
SYNE2-205ENST00000394768 SCG3Q8WXD2 468 aaKnown RBP8.07□□□□□ -1.12
SYNE2-205ENST00000394768 ARHGEF1Q92888 912 aaKnown RBP8.07□□□□□ -1.12
SYNE2-205ENST00000394768 TRIM31Q9BZY9 425 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 SLC38A10Q9HBR0 1119 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 MYO1AQ9UBC5 1043 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 V9GY48 417 aaPredicted RBP8.07□□□□□ -1.12
SYNE2-205ENST00000394768 MAST1Q9Y2H9 1570 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 MYO1FO00160 1098 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 SUN1O94901 812 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 CCND2P30279 289 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 MAPK8IP2Q13387 824 aaPredicted RBP8.07□□□□□ -1.12
SYNE2-205ENST00000394768 E2F5Q15329 346 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 ARHGEF18Q6ZSZ5 1173 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 TSSK1BQ9BXA7 367 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 PACSIN2Q9UNF0 486 aaPredicted RBP8.07□□□□□ -1.12
SYNE2-205ENST00000394768 TTC23LQ6PF05 361 aa8.07□□□□□ -1.12
SYNE2-205ENST00000394768 MEIS3Q99687 375 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms