RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 ZC3H15Q8WU90 426 aaKnown RBP7.95□□□□□ -1.14
RTN4-205ENST00000394609 RBSNQ9H1K0 784 aa7.95□□□□□ -1.14
RTN4-205ENST00000394609 GMPR2Q9P2T1 348 aaKnown RBP7.95□□□□□ -1.14
RTN4-205ENST00000394609 CNOT7Q9UIV1 285 aaKnown RBP7.95□□□□□ -1.14
RTN4-205ENST00000394609 IRF6O14896 467 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 SLC16A2P36021 539 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 ZNF280AP59817 542 aaPredicted RBP7.94□□□□□ -1.14
RTN4-205ENST00000394609 NPY5RQ15761 445 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 WWC2Q6AWC2 1192 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 TTBK2Q6IQ55 1244 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 KCTD1Q719H9 257 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 KCNG4Q8TDN1 519 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 ZBED3Q96IU2 234 aaPredicted RBP7.94□□□□□ -1.14
RTN4-205ENST00000394609 PIGSQ96S52 555 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 LZTS2Q9BRK4 669 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 GOLPH3LQ9H4A5 285 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 KANSL2Q9H9L4 492 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 ZNF646O15015 1829 aaPredicted RBP7.94□□□□□ -1.14
RTN4-205ENST00000394609 YEATS4O95619 227 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 TPM3P06753 285 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 ZSCAN20P17040 1043 aaPredicted RBP7.94□□□□□ -1.14
RTN4-205ENST00000394609 RPS12P25398 132 aaKnown RBP7.94□□□□□ -1.14
RTN4-205ENST00000394609 ICA1Q05084 483 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 ZNF543Q08ER8 600 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 RASA3Q14644 834 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 SLC39A14Q15043 492 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 CCDC96Q2M329 555 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 FKBP1CQ5VVH2 108 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 TMEM179Q6ZVK1 233 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 RRP36Q96EU6 259 aaKnown RBP7.94□□□□□ -1.14
RTN4-205ENST00000394609 SYT17Q9BSW7 474 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 BRMS1Q9HCU9 246 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 SPTLC3Q9NUV7 552 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 HERC5Q9UII4 1024 aaKnown RBP7.94□□□□□ -1.14
RTN4-205ENST00000394609 PCDHB6Q9Y5E3 794 aa7.94□□□□□ -1.14
RTN4-205ENST00000394609 A0A1B0GVL5 298 aa7.93□□□□□ -1.14
RTN4-205ENST00000394609 SNHG28P0DPA3 235 aa7.93□□□□□ -1.14
RTN4-205ENST00000394609 SMPD1P17405 629 aa7.93□□□□□ -1.14
RTN4-205ENST00000394609 LMNB1P20700 586 aa7.93□□□□□ -1.14
RTN4-205ENST00000394609 WNT7BP56706 349 aa7.93□□□□□ -1.14
RTN4-205ENST00000394609 RBM10P98175 930 aaKnown RBP7.93□□□□□ -1.14
RTN4-205ENST00000394609 PTPAQ15257 358 aa7.93□□□□□ -1.14
RTN4-205ENST00000394609 ASPRV1Q53RT3 343 aa7.93□□□□□ -1.14
RTN4-205ENST00000394609 RILPL1Q5EBL4 403 aa7.93□□□□□ -1.14
RTN4-205ENST00000394609 PIK3AP1Q6ZUJ8 805 aa7.93□□□□□ -1.14
RTN4-205ENST00000394609 ILDR2Q71H61 639 aa7.93□□□□□ -1.14
RTN4-205ENST00000394609 FAM83AQ86UY5 434 aa7.93□□□□□ -1.14
RTN4-205ENST00000394609 FSIP1Q8NA03 581 aa7.93□□□□□ -1.14
RTN4-205ENST00000394609 RASGRP4Q8TDF6 673 aa7.93□□□□□ -1.14
RTN4-205ENST00000394609 DPF2Q92785 391 aa7.93□□□□□ -1.14
RTN4-205ENST00000394609 CLIC6Q96NY7 704 aa7.93□□□□□ -1.14
RTN4-205ENST00000394609 NUP88Q99567 741 aaPredicted RBP7.93□□□□□ -1.14
RTN4-205ENST00000394609 SPZ1Q9BXG8 430 aa7.93□□□□□ -1.14
RTN4-205ENST00000394609 NUP62CLQ9H1M0 184 aa7.93□□□□□ -1.14
RTN4-205ENST00000394609 BARHL2Q9NY43 387 aa7.93□□□□□ -1.14
RTN4-205ENST00000394609 NYAP2Q9P242 653 aa7.93□□□□□ -1.14
RTN4-205ENST00000394609 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.93□□□□□ -1.14
RTN4-205ENST00000394609 SEC63Q9UGP8 760 aaKnown RBP7.93□□□□□ -1.14
RTN4-205ENST00000394609 DACH1Q9UI36 760 aa7.93□□□□□ -1.14
RTN4-205ENST00000394609 MRVI1Q9Y6F6 885 aa7.93□□□□□ -1.14
RTN4-205ENST00000394609 FOCADQ5VW36 1801 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 A0A1W2PRG0 241 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 F5H6K3 240 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 STXBP3O00186 592 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 WFS1O76024 890 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 SLC1A4P43007 532 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 NAPAP54920 295 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 MDM2Q00987 491 aaPredicted RBP7.92□□□□□ -1.14
RTN4-205ENST00000394609 KLRC3Q07444 240 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 AXDND1Q5T1B0 1012 aaPredicted RBP7.92□□□□□ -1.14
RTN4-205ENST00000394609 SLFN13Q68D06 897 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 ADALQ6DHV7 355 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 CCDC73Q6ZRK6 1079 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 CKAP2LQ8IYA6 745 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 ADGRF4Q8IZF3 695 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 BLIDQ8IZY5 108 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 SPICE1Q8N0Z3 855 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 RNF214Q8ND24 703 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 TNFRSF25Q93038 417 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 MKL1Q969V6 931 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 RIOX1Q9H6W3 641 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 SH3GLB2Q9NR46 395 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 HACL1Q9UJ83 578 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 FER1L6Q2WGJ9 1857 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 USP17L10C9JJH3 530 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 H7C1D1 291 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 HOXA2O43364 376 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 YBX3P16989 372 aaKnown RBP eCLIP7.92□□□□□ -1.142e-23■□□□□ 9.5
RTN4-205ENST00000394609 CALML3P27482 149 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 ECE1P42892 770 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 NDUFA8P51970 172 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 SNW1Q13573 536 aaKnown RBP7.92□□□□□ -1.14
RTN4-205ENST00000394609 SYCP1Q15431 976 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 ZNF174Q15697 407 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 KIF4BQ2VIQ3 1234 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 SPECC1Q5M775 1068 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 PRAMEF18Q5VWM3 479 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 CCDC84Q86UT8 332 aaPredicted RBP7.92□□□□□ -1.14
RTN4-205ENST00000394609 TRPM4Q8TD43 1214 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 ACER1Q8TDN7 264 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms