RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 BICDL2A1A5D9 508 aa18.64■□□□□ 0.57
PRDM5-202ENST00000394435 SASH3O75995 380 aa18.64■□□□□ 0.57
PRDM5-202ENST00000394435 ADCY7P51828 1080 aa18.64■□□□□ 0.57
PRDM5-202ENST00000394435 AMPD3Q01432 767 aa18.64■□□□□ 0.57
PRDM5-202ENST00000394435 GRB10Q13322 594 aa18.64■□□□□ 0.57
PRDM5-202ENST00000394435 DDX4Q9NQI0 724 aaKnown RBP18.64■□□□□ 0.57
PRDM5-202ENST00000394435 SLC37A4O43826 429 aa18.63■□□□□ 0.57
PRDM5-202ENST00000394435 TDP2O95551 362 aa18.63■□□□□ 0.57
PRDM5-202ENST00000394435 TBC1D8O95759 1140 aa18.63■□□□□ 0.57
PRDM5-202ENST00000394435 GABPAQ06546 454 aa18.63■□□□□ 0.57
PRDM5-202ENST00000394435 WDR59Q6PJI9 974 aa18.63■□□□□ 0.57
PRDM5-202ENST00000394435 MTMR9Q96QG7 549 aa18.63■□□□□ 0.57
PRDM5-202ENST00000394435 CRAMP1Q96RY5 1269 aa18.63■□□□□ 0.57
PRDM5-202ENST00000394435 LRWD1Q9UFC0 647 aa18.63■□□□□ 0.57
PRDM5-202ENST00000394435 GUCA1BQ9UMX6 200 aa18.63■□□□□ 0.57
PRDM5-202ENST00000394435 EDIL3O43854 480 aa18.63■□□□□ 0.57
PRDM5-202ENST00000394435 MTIF2P46199 727 aaKnown RBP18.63■□□□□ 0.57
PRDM5-202ENST00000394435 TSR1Q2NL82 804 aaKnown RBP18.63■□□□□ 0.57
PRDM5-202ENST00000394435 SEPT12Q8IYM1 358 aa18.63■□□□□ 0.57
PRDM5-202ENST00000394435 KIAA0895Q8NCT3 520 aa18.63■□□□□ 0.57
PRDM5-202ENST00000394435 PNMA5Q96PV4 448 aa18.63■□□□□ 0.57
PRDM5-202ENST00000394435 MXD3Q9BW11 206 aa18.63■□□□□ 0.57
PRDM5-202ENST00000394435 SLC39A2Q9NP94 309 aa18.63■□□□□ 0.57
PRDM5-202ENST00000394435 AGPAT5Q9NUQ2 364 aa18.63■□□□□ 0.57
PRDM5-202ENST00000394435 PLIN4Q96Q06 1357 aa18.63■□□□□ 0.57
PRDM5-202ENST00000394435 RASSF10A6NK89 507 aa18.62■□□□□ 0.57
PRDM5-202ENST00000394435 TBC1D8BQ0IIM8 1120 aa18.62■□□□□ 0.57
PRDM5-202ENST00000394435 ORC2Q13416 577 aaPredicted RBP18.62■□□□□ 0.57
PRDM5-202ENST00000394435 MCM6Q14566 821 aa18.62■□□□□ 0.57
PRDM5-202ENST00000394435 ASPRV1Q53RT3 343 aa18.62■□□□□ 0.57
PRDM5-202ENST00000394435 SV2BQ7L1I2 683 aa18.62■□□□□ 0.57
PRDM5-202ENST00000394435 BLOC1S4Q9NUP1 217 aa18.62■□□□□ 0.57
PRDM5-202ENST00000394435 TFR2Q9UP52 801 aa18.62■□□□□ 0.57
PRDM5-202ENST00000394435 hCG_1984214I3L0E3 225 aa18.62■□□□□ 0.57
PRDM5-202ENST00000394435 POLRMTO00411 1230 aaKnown RBP18.62■□□□□ 0.57
PRDM5-202ENST00000394435 PPEF1O14829 653 aaPredicted RBP18.62■□□□□ 0.57
PRDM5-202ENST00000394435 NKRFO15226 690 aaKnown RBP eCLIP18.62■□□□□ 0.57
PRDM5-202ENST00000394435 TUBB2AQ13885 445 aa18.62■□□□□ 0.57
PRDM5-202ENST00000394435 CNNM4Q6P4Q7 775 aa18.62■□□□□ 0.57
PRDM5-202ENST00000394435 ZNF713Q8N859 430 aaPredicted RBP18.62■□□□□ 0.57
PRDM5-202ENST00000394435 TUBB2BQ9BVA1 445 aa18.62■□□□□ 0.57
PRDM5-202ENST00000394435 ARFGAP3Q9NP61 516 aa18.62■□□□□ 0.57
PRDM5-202ENST00000394435 MYO1AQ9UBC5 1043 aa18.62■□□□□ 0.57
PRDM5-202ENST00000394435 IGKV6D-41A0A0C4DH26 115 aa18.61■□□□□ 0.57
PRDM5-202ENST00000394435 MYMKA6NI61 221 aa18.61■□□□□ 0.57
PRDM5-202ENST00000394435 ATP8B1O43520 1251 aa18.61■□□□□ 0.57
PRDM5-202ENST00000394435 HERVK_113P62684 666 aa18.61■□□□□ 0.57
PRDM5-202ENST00000394435 MEX3CQ5U5Q3 659 aaKnown RBP18.61■□□□□ 0.57
PRDM5-202ENST00000394435 FAM114A1Q8IWE2 563 aa18.61■□□□□ 0.57
PRDM5-202ENST00000394435 CERS5Q8N5B7 392 aa18.61■□□□□ 0.57
PRDM5-202ENST00000394435 PCMTD1Q96MG8 357 aaPredicted RBP18.61■□□□□ 0.57
PRDM5-202ENST00000394435 NOC4LQ9BVI4 516 aaKnown RBP18.61■□□□□ 0.57
PRDM5-202ENST00000394435 SEMA6BQ9H3T3 888 aa18.61■□□□□ 0.57
PRDM5-202ENST00000394435 ANKZF1Q9H8Y5 726 aa18.61■□□□□ 0.57
PRDM5-202ENST00000394435 SNHG28P0DPA3 235 aa18.61■□□□□ 0.57
PRDM5-202ENST00000394435 TRIM21P19474 475 aaKnown RBP18.61■□□□□ 0.57
PRDM5-202ENST00000394435 UBE2SQ16763 222 aa18.61■□□□□ 0.57
PRDM5-202ENST00000394435 TTBK2Q6IQ55 1244 aa18.61■□□□□ 0.57
PRDM5-202ENST00000394435 DYMQ7RTS9 669 aa18.61■□□□□ 0.57
PRDM5-202ENST00000394435 TTYH3Q9C0H2 523 aa18.61■□□□□ 0.57
PRDM5-202ENST00000394435 JMJD4Q9H9V9 463 aa18.61■□□□□ 0.57
PRDM5-202ENST00000394435 SPATA31A6Q5VVP1 1343 aa18.6■□□□□ 0.57
PRDM5-202ENST00000394435 POTEMA6NI47 508 aa18.6■□□□□ 0.57
PRDM5-202ENST00000394435 FXR2P51116 673 aaKnown RBP eCLIP18.6■□□□□ 0.57
PRDM5-202ENST00000394435 MIIPQ5JXC2 388 aa18.6■□□□□ 0.57
PRDM5-202ENST00000394435 SP8Q8IXZ3 490 aa18.6■□□□□ 0.57
PRDM5-202ENST00000394435 CDK5RAP3Q96JB5 506 aa18.6■□□□□ 0.57
PRDM5-202ENST00000394435 NUDT12Q9BQG2 462 aa18.6■□□□□ 0.57
PRDM5-202ENST00000394435 USP40Q9NVE5 1235 aa18.6■□□□□ 0.57
PRDM5-202ENST00000394435 LTBP1Q14766 1721 aa18.6■□□□□ 0.57
PRDM5-202ENST00000394435 KIF20AO95235 890 aa18.6■□□□□ 0.57
PRDM5-202ENST00000394435 TNNI2P48788 182 aa18.6■□□□□ 0.57
PRDM5-202ENST00000394435 SCNN1DP51172 638 aa18.6■□□□□ 0.57
PRDM5-202ENST00000394435 TMEM266Q2M3C6 531 aa18.6■□□□□ 0.57
PRDM5-202ENST00000394435 ADGRF4Q8IZF3 695 aa18.6■□□□□ 0.57
PRDM5-202ENST00000394435 PPP1R11O60927 126 aaPredicted RBP18.59■□□□□ 0.57
PRDM5-202ENST00000394435 TTLL1O95922 423 aa18.59■□□□□ 0.57
PRDM5-202ENST00000394435 PPP1R2P41236 205 aa18.59■□□□□ 0.57
PRDM5-202ENST00000394435 ZNF543Q08ER8 600 aa18.59■□□□□ 0.57
PRDM5-202ENST00000394435 LARP4BQ92615 738 aaKnown RBP18.59■□□□□ 0.57
PRDM5-202ENST00000394435 NUP58Q9BVL2 599 aa18.59■□□□□ 0.57
PRDM5-202ENST00000394435 COA1Q9GZY4 146 aa18.59■□□□□ 0.57
PRDM5-202ENST00000394435 SLURP2P0DP57 97 aa18.59■□□□□ 0.57
PRDM5-202ENST00000394435 SLC16A2P36021 539 aa18.59■□□□□ 0.57
PRDM5-202ENST00000394435 AMPD2Q01433 879 aa18.59■□□□□ 0.57
PRDM5-202ENST00000394435 ATP2B2Q01814 1243 aa18.59■□□□□ 0.57
PRDM5-202ENST00000394435 MEA1Q16626 185 aa18.59■□□□□ 0.57
PRDM5-202ENST00000394435 DOK7Q18PE1 504 aa18.59■□□□□ 0.57
PRDM5-202ENST00000394435 WHAMMP3Q1A5X7 153 aa18.59■□□□□ 0.57
PRDM5-202ENST00000394435 PNKPQ96T60 521 aa18.59■□□□□ 0.57
PRDM5-202ENST00000394435 HAUS4Q9H6D7 363 aa18.59■□□□□ 0.57
PRDM5-202ENST00000394435 STK17AQ9UEE5 414 aa18.59■□□□□ 0.57
PRDM5-202ENST00000394435 SERPINB13Q9UIV8 391 aa18.59■□□□□ 0.57
PRDM5-202ENST00000394435 MYO6Q9UM54 1294 aa18.59■□□□□ 0.57
PRDM5-202ENST00000394435 PNMA6FA0A0J9YX94 578 aa18.58■□□□□ 0.57
PRDM5-202ENST00000394435 KLRG2A4D1S0 409 aaPredicted RBP18.58■□□□□ 0.57
PRDM5-202ENST00000394435 BRD3Q15059 726 aa18.58■□□□□ 0.57
PRDM5-202ENST00000394435 LONRF2Q1L5Z9 754 aa18.58■□□□□ 0.57
PRDM5-202ENST00000394435 COBLL1Q53SF7 1204 aa18.58■□□□□ 0.57
PRDM5-202ENST00000394435 UNC13DQ70J99 1090 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms