RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 IKBKBO14920 756 aa20.26■□□□□ 0.83
CLDND1-204ENST00000394185 CD44P16070 742 aaKnown RBP20.26■□□□□ 0.83
CLDND1-204ENST00000394185 MYL5Q02045 173 aa20.26■□□□□ 0.83
CLDND1-204ENST00000394185 HSP90AA4PQ58FG1 418 aa20.26■□□□□ 0.83
CLDND1-204ENST00000394185 MMTAG2Q9BU76 263 aaKnown RBP20.26■□□□□ 0.83
CLDND1-204ENST00000394185 SMC2O95347 1197 aa20.25■□□□□ 0.83
CLDND1-204ENST00000394185 PTGS1P23219 599 aa20.25■□□□□ 0.83
CLDND1-204ENST00000394185 CCDC144BQ3MJ40 725 aa20.25■□□□□ 0.83
CLDND1-204ENST00000394185 RRAGBQ5VZM2 374 aa20.25■□□□□ 0.83
CLDND1-204ENST00000394185 CCDC174Q6PII3 467 aa20.25■□□□□ 0.83
CLDND1-204ENST00000394185 CABP7Q86V35 215 aa20.25■□□□□ 0.83
CLDND1-204ENST00000394185 IGSF22Q8N9C0 903 aa20.25■□□□□ 0.83
CLDND1-204ENST00000394185 CCSER1Q9C0I3 900 aa20.25■□□□□ 0.83
CLDND1-204ENST00000394185 DDX25Q9UHL0 483 aaKnown RBP20.25■□□□□ 0.83
CLDND1-204ENST00000394185 POTEMA6NI47 508 aa20.25■□□□□ 0.83
CLDND1-204ENST00000394185 HOXA13P31271 388 aaPredicted RBP20.25■□□□□ 0.83
CLDND1-204ENST00000394185 ANGEL2Q5VTE6 544 aaKnown RBP20.25■□□□□ 0.83
CLDND1-204ENST00000394185 ANO3Q9BYT9 981 aa20.25■□□□□ 0.83
CLDND1-204ENST00000394185 SPON1Q9HCB6 807 aa20.25■□□□□ 0.83
CLDND1-204ENST00000394185 FANCLQ9NW38 375 aa20.25■□□□□ 0.83
CLDND1-204ENST00000394185 SMTNL1A8MU46 457 aa20.24■□□□□ 0.83
CLDND1-204ENST00000394185 PLCG1P19174 1290 aa20.24■□□□□ 0.83
CLDND1-204ENST00000394185 INPP5BP32019 993 aa20.24■□□□□ 0.83
CLDND1-204ENST00000394185 CLCN1P35523 988 aa20.24■□□□□ 0.83
CLDND1-204ENST00000394185 PPP4R3AQ6IN85 833 aa20.24■□□□□ 0.83
CLDND1-204ENST00000394185 CCDC186Q7Z3E2 898 aa20.24■□□□□ 0.83
CLDND1-204ENST00000394185 TRIML1Q8N9V2 468 aa20.24■□□□□ 0.83
CLDND1-204ENST00000394185 HAS1Q92839 578 aa20.24■□□□□ 0.83
CLDND1-204ENST00000394185 CCDC34Q96HJ3 373 aa20.24■□□□□ 0.83
CLDND1-204ENST00000394185 MRFAP1L1Q96HT8 127 aa20.24■□□□□ 0.83
CLDND1-204ENST00000394185 MMP14P50281 582 aa20.24■□□□□ 0.83
CLDND1-204ENST00000394185 ORC2Q13416 577 aaPredicted RBP20.24■□□□□ 0.83
CLDND1-204ENST00000394185 MLKLQ8NB16 471 aa20.24■□□□□ 0.83
CLDND1-204ENST00000394185 AK8Q96MA6 479 aa20.24■□□□□ 0.83
CLDND1-204ENST00000394185 FEZ1Q99689 392 aa20.24■□□□□ 0.83
CLDND1-204ENST00000394185 IFNKQ9P0W0 207 aa20.24■□□□□ 0.83
CLDND1-204ENST00000394185 ATAD5Q96QE3 1844 aa20.23■□□□□ 0.83
CLDND1-204ENST00000394185 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.23■□□□□ 0.83
CLDND1-204ENST00000394185 TBC1D5Q92609 795 aa20.23■□□□□ 0.83
CLDND1-204ENST00000394185 GSDMAQ96QA5 445 aa20.23■□□□□ 0.83
CLDND1-204ENST00000394185 XPO4Q9C0E2 1151 aaKnown RBP20.23■□□□□ 0.83
CLDND1-204ENST00000394185 GTPBP6O43824 516 aaPredicted RBP20.22■□□□□ 0.83
CLDND1-204ENST00000394185 EPS15P42566 896 aa20.22■□□□□ 0.83
CLDND1-204ENST00000394185 KLHL10Q6JEL2 608 aa20.22■□□□□ 0.83
CLDND1-204ENST00000394185 NUDT12Q9BQG2 462 aa20.22■□□□□ 0.83
CLDND1-204ENST00000394185 PYM1Q9BRP8 204 aaKnown RBP20.22■□□□□ 0.83
CLDND1-204ENST00000394185 GPRC5DQ9NZD1 345 aa20.22■□□□□ 0.83
CLDND1-204ENST00000394185 COBLO75128 1261 aa20.22■□□□□ 0.83
CLDND1-204ENST00000394185 CDC25BP30305 580 aa20.22■□□□□ 0.83
CLDND1-204ENST00000394185 HIRAP54198 1017 aaPredicted RBP20.22■□□□□ 0.83
CLDND1-204ENST00000394185 C17orf53Q8N3J3 647 aaPredicted RBP20.22■□□□□ 0.83
CLDND1-204ENST00000394185 CRYGNQ8WXF5 182 aa20.22■□□□□ 0.83
CLDND1-204ENST00000394185 H7C1D1 291 aa20.21■□□□□ 0.83
CLDND1-204ENST00000394185 LMNB1P20700 586 aa20.21■□□□□ 0.83
CLDND1-204ENST00000394185 FXR2P51116 673 aaKnown RBP eCLIP20.21■□□□□ 0.83
CLDND1-204ENST00000394185 LRMPQ12912 555 aa20.21■□□□□ 0.83
CLDND1-204ENST00000394185 ARID5BQ14865 1188 aa20.21■□□□□ 0.83
CLDND1-204ENST00000394185 GLT8D2Q9H1C3 349 aa20.21■□□□□ 0.83
CLDND1-204ENST00000394185 RANBP17Q9H2T7 1088 aaKnown RBP20.21■□□□□ 0.83
CLDND1-204ENST00000394185 SH2D4AQ9H788 454 aa20.21■□□□□ 0.83
CLDND1-204ENST00000394185 LRWD1Q9UFC0 647 aa20.21■□□□□ 0.83
CLDND1-204ENST00000394185 STX17P56962 302 aa20.21■□□□□ 0.83
CLDND1-204ENST00000394185 FANCCQ00597 558 aa20.21■□□□□ 0.83
CLDND1-204ENST00000394185 PTPN21Q16825 1174 aa20.21■□□□□ 0.83
CLDND1-204ENST00000394185 KBTBD4Q9NVX7 518 aa20.21■□□□□ 0.83
CLDND1-204ENST00000394185 NFE2L3Q9Y4A8 694 aa20.21■□□□□ 0.83
CLDND1-204ENST00000394185 PPP1R3GB7ZBB8 358 aa20.2■□□□□ 0.82
CLDND1-204ENST00000394185 ARHGAP4P98171 946 aa20.2■□□□□ 0.82
CLDND1-204ENST00000394185 ZKSCAN4Q969J2 545 aaPredicted RBP20.2■□□□□ 0.82
CLDND1-204ENST00000394185 GGA3Q9NZ52 723 aa20.2■□□□□ 0.82
CLDND1-204ENST00000394185 GOLGA6L6A8MZA4 724 aa20.19■□□□□ 0.82
CLDND1-204ENST00000394185 RPN1P04843 607 aaKnown RBP20.19■□□□□ 0.82
CLDND1-204ENST00000394185 TPM4P67936 248 aa20.19■□□□□ 0.82
CLDND1-204ENST00000394185 AP3B2Q13367 1082 aa20.19■□□□□ 0.82
CLDND1-204ENST00000394185 DLK2Q6UY11 383 aa20.19■□□□□ 0.82
CLDND1-204ENST00000394185 CHURC1Q8WUH1 139 aa20.19■□□□□ 0.82
CLDND1-204ENST00000394185 PYCARDQ9ULZ3 195 aa20.19■□□□□ 0.82
CLDND1-204ENST00000394185 CTNND1O60716 968 aaKnown RBP20.19■□□□□ 0.82
CLDND1-204ENST00000394185 GRB10Q13322 594 aa20.19■□□□□ 0.82
CLDND1-204ENST00000394185 DHX8Q14562 1220 aaKnown RBP20.19■□□□□ 0.82
CLDND1-204ENST00000394185 FILIP1Q7Z7B0 1213 aa20.19■□□□□ 0.82
CLDND1-204ENST00000394185 FCHSD1Q86WN1 690 aa20.19■□□□□ 0.82
CLDND1-204ENST00000394185 GPC2Q8N158 579 aa20.19■□□□□ 0.82
CLDND1-204ENST00000394185 PNMA5Q96PV4 448 aa20.19■□□□□ 0.82
CLDND1-204ENST00000394185 SAMSN1Q9NSI8 373 aaKnown RBP20.19■□□□□ 0.82
CLDND1-204ENST00000394185 GDAQ9Y2T3 454 aa20.19■□□□□ 0.82
CLDND1-204ENST00000394185 SPDYE3A6NKU9 549 aa20.18■□□□□ 0.82
CLDND1-204ENST00000394185 FAM86B1E9PN63 330 aa20.18■□□□□ 0.82
CLDND1-204ENST00000394185 DDNO94850 711 aaPredicted RBP20.18■□□□□ 0.82
CLDND1-204ENST00000394185 CFBP00751 764 aa20.18■□□□□ 0.82
CLDND1-204ENST00000394185 FAM86B2P0C5J1 330 aa20.18■□□□□ 0.82
CLDND1-204ENST00000394185 ECM1Q16610 540 aa20.18■□□□□ 0.82
CLDND1-204ENST00000394185 TMEM266Q2M3C6 531 aa20.18■□□□□ 0.82
CLDND1-204ENST00000394185 CYP2W1Q8TAV3 490 aa20.18■□□□□ 0.82
CLDND1-204ENST00000394185 ENOX1Q8TC92 643 aaKnown RBP20.18■□□□□ 0.82
CLDND1-204ENST00000394185 NAP1L5Q96NT1 182 aaPredicted RBP20.18■□□□□ 0.82
CLDND1-204ENST00000394185 DACH1Q9UI36 760 aa20.18■□□□□ 0.82
CLDND1-204ENST00000394185 MAPK8IP1Q9UQF2 711 aa20.18■□□□□ 0.82
CLDND1-204ENST00000394185 GCFC2P16383 781 aaKnown RBP20.18■□□□□ 0.82
CLDND1-204ENST00000394185 USP11P51784 963 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms