RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 SLF1Q9BQI6 1058 aa22.27■■□□□ 1.16
RAB5C-202ENST00000393860 RPAP3Q9H6T3 665 aaPredicted RBP22.27■■□□□ 1.16
RAB5C-202ENST00000393860 AP5Z1O43299 807 aa22.27■■□□□ 1.16
RAB5C-202ENST00000393860 USP2O75604 605 aaPredicted RBP22.27■■□□□ 1.16
RAB5C-202ENST00000393860 CEP57L1Q8IYX8 460 aa22.27■■□□□ 1.16
RAB5C-202ENST00000393860 AGBL1Q96MI9 1066 aa22.27■■□□□ 1.16
RAB5C-202ENST00000393860 AS3MTQ9HBK9 375 aa22.27■■□□□ 1.16
RAB5C-202ENST00000393860 DDX25Q9UHL0 483 aaKnown RBP22.27■■□□□ 1.16
RAB5C-202ENST00000393860 FLOT1O75955 427 aa22.26■■□□□ 1.15
RAB5C-202ENST00000393860 CFBP00751 764 aa22.26■■□□□ 1.15
RAB5C-202ENST00000393860 TXLNAP40222 546 aa22.26■■□□□ 1.15
RAB5C-202ENST00000393860 BACE1P56817 501 aa22.26■■□□□ 1.15
RAB5C-202ENST00000393860 AP3B2Q13367 1082 aa22.26■■□□□ 1.15
RAB5C-202ENST00000393860 E2F4Q16254 413 aa22.26■■□□□ 1.15
RAB5C-202ENST00000393860 FCHSD1Q86WN1 690 aa22.26■■□□□ 1.15
RAB5C-202ENST00000393860 LDHDQ86WU2 507 aa22.26■■□□□ 1.15
RAB5C-202ENST00000393860 RASSF8Q8NHQ8 419 aa22.26■■□□□ 1.15
RAB5C-202ENST00000393860 MTMR9Q96QG7 549 aa22.26■■□□□ 1.15
RAB5C-202ENST00000393860 PPP1R9BQ96SB3 815 aa22.26■■□□□ 1.15
RAB5C-202ENST00000393860 WDR18Q9BV38 432 aa22.26■■□□□ 1.15
RAB5C-202ENST00000393860 HOOK1Q9UJC3 728 aaKnown RBP22.26■■□□□ 1.15
RAB5C-202ENST00000393860 SLFN14P0C7P3 912 aa22.25■■□□□ 1.15
RAB5C-202ENST00000393860 EPHX2P34913 555 aa22.25■■□□□ 1.15
RAB5C-202ENST00000393860 HMGCS2P54868 508 aa22.25■■□□□ 1.15
RAB5C-202ENST00000393860 ORC2Q13416 577 aaPredicted RBP22.25■■□□□ 1.15
RAB5C-202ENST00000393860 KRT26Q7Z3Y9 468 aa22.25■■□□□ 1.15
RAB5C-202ENST00000393860 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.25■■□□□ 1.153e-6■■■■■ 38.3
RAB5C-202ENST00000393860 PAGE5Q96GU1 130 aa22.25■■□□□ 1.15
RAB5C-202ENST00000393860 SPDYE3A6NKU9 549 aa22.25■■□□□ 1.15
RAB5C-202ENST00000393860 USP14P54578 494 aa22.25■■□□□ 1.15
RAB5C-202ENST00000393860 IQCB1Q15051 598 aa22.25■■□□□ 1.15
RAB5C-202ENST00000393860 CCPG1Q9ULG6 757 aa22.25■■□□□ 1.15
RAB5C-202ENST00000393860 ZNF536O15090 1300 aa22.24■■□□□ 1.15
RAB5C-202ENST00000393860 OTOFQ9HC10 1997 aa22.24■■□□□ 1.15
RAB5C-202ENST00000393860 UBA7P41226 1012 aa22.24■■□□□ 1.15
RAB5C-202ENST00000393860 PPP4R3AQ6IN85 833 aa22.24■■□□□ 1.15
RAB5C-202ENST00000393860 KANK3Q6NY19 840 aa22.24■■□□□ 1.15
RAB5C-202ENST00000393860 ELOA2Q8IYF1 753 aaPredicted RBP22.24■■□□□ 1.15
RAB5C-202ENST00000393860 CPXCR1Q8N123 301 aa22.24■■□□□ 1.15
RAB5C-202ENST00000393860 AOPEPQ8N6M6 819 aa22.24■■□□□ 1.15
RAB5C-202ENST00000393860 IQUBQ8NA54 791 aa22.24■■□□□ 1.15
RAB5C-202ENST00000393860 PRPF38AQ8NAV1 312 aaKnown RBP22.24■■□□□ 1.15
RAB5C-202ENST00000393860 L3MBTL3Q96JM7 780 aaPredicted RBP22.24■■□□□ 1.15
RAB5C-202ENST00000393860 MAN1B1Q9UKM7 699 aa22.24■■□□□ 1.15
RAB5C-202ENST00000393860 STAT6P42226 847 aa22.23■■□□□ 1.15
RAB5C-202ENST00000393860 ARHGAP4P98171 946 aa22.23■■□□□ 1.15
RAB5C-202ENST00000393860 VGLL4Q14135 290 aa22.23■■□□□ 1.15
RAB5C-202ENST00000393860 EAPPQ56P03 285 aaPredicted RBP22.23■■□□□ 1.15
RAB5C-202ENST00000393860 PDXDC2PQ6P474 469 aa22.23■■□□□ 1.15
RAB5C-202ENST00000393860 CABP7Q86V35 215 aa22.23■■□□□ 1.15
RAB5C-202ENST00000393860 DHX40Q8IX18 779 aaKnown RBP22.23■■□□□ 1.15
RAB5C-202ENST00000393860 SMARCE1Q969G3 411 aa22.23■■□□□ 1.15
RAB5C-202ENST00000393860 RAVER2Q9HCJ3 691 aaKnown RBP22.23■■□□□ 1.15
RAB5C-202ENST00000393860 ADCY5O95622 1261 aa22.23■■□□□ 1.15
RAB5C-202ENST00000393860 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.23■■□□□ 1.15
RAB5C-202ENST00000393860 SH3RF1Q7Z6J0 888 aa22.23■■□□□ 1.15
RAB5C-202ENST00000393860 BLZF1Q9H2G9 400 aa22.23■■□□□ 1.15
RAB5C-202ENST00000393860 DISC1Q9NRI5 854 aa22.23■■□□□ 1.15
RAB5C-202ENST00000393860 MRPL11Q9Y3B7 192 aaKnown RBP22.23■■□□□ 1.15
RAB5C-202ENST00000393860 ICAM1P05362 532 aa22.22■■□□□ 1.15
RAB5C-202ENST00000393860 TRAF1Q13077 416 aa22.22■■□□□ 1.15
RAB5C-202ENST00000393860 NOL9Q5SY16 702 aaKnown RBP22.22■■□□□ 1.15
RAB5C-202ENST00000393860 LRRC15Q8TF66 581 aa22.22■■□□□ 1.15
RAB5C-202ENST00000393860 CNKSR2Q8WXI2 1034 aa22.22■■□□□ 1.15
RAB5C-202ENST00000393860 HAS1Q92839 578 aa22.22■■□□□ 1.15
RAB5C-202ENST00000393860 WNK4Q96J92 1243 aa22.22■■□□□ 1.15
RAB5C-202ENST00000393860 PDLIM2Q96JY6 352 aa22.22■■□□□ 1.15
RAB5C-202ENST00000393860 PPP1R9AQ9ULJ8 1098 aa22.22■■□□□ 1.15
RAB5C-202ENST00000393860 SNCAIPQ9Y6H5 919 aa22.22■■□□□ 1.15
RAB5C-202ENST00000393860 PARP14Q460N5 1801 aa22.22■■□□□ 1.15
RAB5C-202ENST00000393860 ABCB11O95342 1321 aa22.22■■□□□ 1.15
RAB5C-202ENST00000393860 POTEMA6NI47 508 aa22.21■■□□□ 1.15
RAB5C-202ENST00000393860 MARCH6O60337 910 aa22.21■■□□□ 1.15
RAB5C-202ENST00000393860 CAVIN2O95810 425 aa22.21■■□□□ 1.15
RAB5C-202ENST00000393860 BMP6P22004 513 aa22.21■■□□□ 1.15
RAB5C-202ENST00000393860 UBXN2AP68543 259 aa22.21■■□□□ 1.15
RAB5C-202ENST00000393860 USP50Q70EL3 339 aaPredicted RBP22.21■■□□□ 1.15
RAB5C-202ENST00000393860 CRYGNQ8WXF5 182 aa22.21■■□□□ 1.15
RAB5C-202ENST00000393860 WDR90Q96KV7 1748 aa22.21■■□□□ 1.15
RAB5C-202ENST00000393860 PAPPA2Q9BXP8 1791 aa22.21■■□□□ 1.15
RAB5C-202ENST00000393860 GLTPD2A6NH11 291 aa22.21■■□□□ 1.15
RAB5C-202ENST00000393860 BECN2A8MW95 431 aa22.21■■□□□ 1.15
RAB5C-202ENST00000393860 GCOM1H8Y6P7 765 aaPredicted RBP22.21■■□□□ 1.15
RAB5C-202ENST00000393860 PIK3CDO00329 1044 aa22.21■■□□□ 1.15
RAB5C-202ENST00000393860 FOSP01100 380 aaPredicted RBP22.21■■□□□ 1.15
RAB5C-202ENST00000393860 POLR2MP0CAP2 368 aa22.21■■□□□ 1.15
RAB5C-202ENST00000393860 GCFC2P16383 781 aaKnown RBP22.21■■□□□ 1.15
RAB5C-202ENST00000393860 USP11P51784 963 aa22.21■■□□□ 1.15
RAB5C-202ENST00000393860 RRAGBQ5VZM2 374 aa22.21■■□□□ 1.15
RAB5C-202ENST00000393860 MOB2Q70IA6 237 aa22.21■■□□□ 1.15
RAB5C-202ENST00000393860 IGSF22Q8N9C0 903 aa22.21■■□□□ 1.15
RAB5C-202ENST00000393860 ATG4CQ96DT6 458 aa22.21■■□□□ 1.15
RAB5C-202ENST00000393860 AK8Q96MA6 479 aa22.21■■□□□ 1.15
RAB5C-202ENST00000393860 MTRQ99707 1265 aa22.21■■□□□ 1.15
RAB5C-202ENST00000393860 CCSER1Q9C0I3 900 aa22.21■■□□□ 1.15
RAB5C-202ENST00000393860 NAT10Q9H0A0 1025 aaKnown RBP22.21■■□□□ 1.15
RAB5C-202ENST00000393860 HOMER2Q9NSB8 354 aa22.21■■□□□ 1.15
RAB5C-202ENST00000393860 GOLGA6L19H0YKK7 550 aa22.2■■□□□ 1.14
RAB5C-202ENST00000393860 ALAS1P13196 640 aa22.2■■□□□ 1.14
RAB5C-202ENST00000393860 SREBF1P36956 1147 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms