RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 NAP1L2Q9ULW6 460 aaPredicted RBP8.91□□□□□ -0.98
HMGB3P1-201ENST00000393368 PLXNA1Q9UIW2 1896 aa8.91□□□□□ -0.98
HMGB3P1-201ENST00000393368 LCTP09848 1927 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 SYNRGQ9UMZ2 1314 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 FRMPD3Q5JV73 1810 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 KLF18A0A0U1RQI7 1052 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 MSCO60682 206 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 SEC24BO95487 1268 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 CFBP00751 764 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 RARBP10826 455 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 COL6A1P12109 1028 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 AKR1A1P14550 325 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 CASTP20810 708 aaKnown RBP8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 HOXA13P31271 388 aaPredicted RBP8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 KIF5BP33176 963 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 ADCYAP1R1P41586 468 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 ATN1P54259 1190 aaPredicted RBP8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 APOBRQ0VD83 1088 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 CCDC144BQ3MJ40 725 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 APOA5Q6Q788 366 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 Q6ZUG5 572 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 SGMS1Q86VZ5 419 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 C7orf61Q8IZ16 206 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 MSL3Q8N5Y2 521 aaKnown RBP8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 SYTL5Q8TDW5 730 aaPredicted RBP8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 FERMT2Q96AC1 680 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 TAAR1Q96RJ0 339 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 LARP6Q9BRS8 491 aaKnown RBP8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 MTA3Q9BTC8 594 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 AMNQ9BXJ7 453 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 SENP6Q9GZR1 1112 aaPredicted RBP8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 XPNPEP3Q9NQH7 507 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 NRBP1Q9UHY1 535 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 PCDHA1Q9Y5I3 950 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 LRRC37A2A6NM11 1700 aa8.9□□□□□ -0.98
HMGB3P1-201ENST00000393368 DNAH12Q6ZR08 3092 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 SMCHD1A6NHR9 2005 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 PNMA6FA0A0J9YX94 578 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 ASB14A6NK59 587 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 GOLGA8AA7E2F4 631 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 GOLGA8BA8MQT2 603 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 H0YGN5 161 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 DNM1LO00429 736 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 ZBTB43O43298 467 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 PPFIA3O75145 1194 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 ADAMTS4O75173 837 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 RPS6KB1P23443 525 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 FGD1P98174 961 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 LRRC41Q15345 812 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 LRRC26Q2I0M4 334 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 TAPT1Q6NXT6 567 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 BLOC1S2Q6QNY1 142 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 TMTC3Q6ZXV5 915 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 NOL8Q76FK4 1167 aaKnown RBP8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 TMTC2Q8N394 836 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 FANCBQ8NB91 859 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 BRF1Q92994 677 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 ZFP91Q96JP5 570 aaPredicted RBP8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 SPZ1Q9BXG8 430 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 UPF3BQ9BZI7 483 aaKnown RBP8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 ABHD16BQ9H3Z7 469 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 PNMA2Q9UL42 364 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 FAM184BQ9ULE4 1060 aa8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 MRPL11Q9Y3B7 192 aaKnown RBP8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 ZNFX1Q9P2E3 1918 aaKnown RBP8.89□□□□□ -0.99
HMGB3P1-201ENST00000393368 CNTNAP5Q8WYK1 1306 aa8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 KBTBD13C9JR72 458 aa8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 EVI5O60447 810 aa8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 HMGB1P09429 215 aaKnown RBP8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 CALM1P0DP23 149 aa8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 CALM2P0DP24 149 aa8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 CALM3P0DP25 149 aa8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 SMPD1P17405 629 aa8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 EIF2AK2P19525 551 aaKnown RBP8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 CDC27P30260 824 aa8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 BEX3Q00994 111 aa8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 TNFAIP2Q03169 654 aa8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 PDE4DQ08499 809 aa8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 RTN1Q16799 776 aa8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 PRPF38BQ5VTL8 546 aaKnown RBP8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 SYNE3Q6ZMZ3 975 aa8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 MCF2L2Q86YR7 1114 aa8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 MORC4Q8TE76 937 aa8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 GPKOWQ92917 476 aaPredicted RBP eCLIP8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 RRP36Q96EU6 259 aaKnown RBP8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 MAP3K14Q99558 947 aa8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 HTATIP2Q9BUP3 242 aa8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 FAM217BQ9NTX9 383 aaPredicted RBP8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 ADD3Q9UEY8 706 aaKnown RBP8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 ZMYND8Q9ULU4 1186 aaPredicted RBP8.88□□□□□ -0.99
HMGB3P1-201ENST00000393368 DTNBO60941 627 aa8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 DUSP11O75319 330 aaKnown RBP8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 C6orf222P0C671 652 aaPredicted RBP8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 SYN1P17600 705 aa8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 EDNRBP24530 442 aa8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 ADD1P35611 737 aaKnown RBP8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 GNAQP50148 359 aa8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 METAP2P50579 478 aaKnown RBP eCLIP8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 HSD17B4P51659 736 aa8.87□□□□□ -0.99
HMGB3P1-201ENST00000393368 FUT2Q10981 343 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms