RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 SARSP49591 514 aaKnown RBP16.94■□□□□ 0.3
MKS1-202ENST00000393119 FMR1Q06787 632 aaKnown RBP eCLIP16.94■□□□□ 0.3
MKS1-202ENST00000393119 ARL6IP4Q66PJ3 421 aaKnown RBP16.94■□□□□ 0.3
MKS1-202ENST00000393119 ILDR2Q71H61 639 aa16.94■□□□□ 0.3
MKS1-202ENST00000393119 AMNQ9BXJ7 453 aa16.94■□□□□ 0.3
MKS1-202ENST00000393119 HSD3B7Q9H2F3 369 aa16.94■□□□□ 0.3
MKS1-202ENST00000393119 TTC12Q9H892 705 aaPredicted RBP16.94■□□□□ 0.3
MKS1-202ENST00000393119 GOLGA6L19H0YKK7 550 aa16.94■□□□□ 0.3
MKS1-202ENST00000393119 ASNSP08243 561 aa16.94■□□□□ 0.3
MKS1-202ENST00000393119 ATP1A3P13637 1013 aa16.94■□□□□ 0.3
MKS1-202ENST00000393119 MRPL12P52815 198 aaKnown RBP16.94■□□□□ 0.3
MKS1-202ENST00000393119 UBXN2AP68543 259 aa16.94■□□□□ 0.3
MKS1-202ENST00000393119 BTNL9Q6UXG8 535 aa16.94■□□□□ 0.3
MKS1-202ENST00000393119 SH3RF1Q7Z6J0 888 aa16.94■□□□□ 0.3
MKS1-202ENST00000393119 GOPCQ9HD26 462 aa16.94■□□□□ 0.3
MKS1-202ENST00000393119 hCG_1984214I3L0E3 225 aa16.93■□□□□ 0.3
MKS1-202ENST00000393119 LMOD1P29536 600 aaPredicted RBP16.93■□□□□ 0.3
MKS1-202ENST00000393119 LONP1P36776 959 aaKnown RBP16.93■□□□□ 0.3
MKS1-202ENST00000393119 DHX8Q14562 1220 aaKnown RBP16.93■□□□□ 0.3
MKS1-202ENST00000393119 FCHSD1Q86WN1 690 aa16.93■□□□□ 0.3
MKS1-202ENST00000393119 ZNF713Q8N859 430 aaPredicted RBP16.93■□□□□ 0.3
MKS1-202ENST00000393119 RASSF8Q8NHQ8 419 aa16.93■□□□□ 0.3
MKS1-202ENST00000393119 CYP2W1Q8TAV3 490 aa16.93■□□□□ 0.3
MKS1-202ENST00000393119 SMARCE1Q969G3 411 aa16.93■□□□□ 0.3
MKS1-202ENST00000393119 MTMR9Q96QG7 549 aa16.93■□□□□ 0.3
MKS1-202ENST00000393119 MMTAG2Q9BU76 263 aaKnown RBP16.93■□□□□ 0.3
MKS1-202ENST00000393119 MORC2Q9Y6X9 1032 aaPredicted RBP16.93■□□□□ 0.3
MKS1-202ENST00000393119 CD44P16070 742 aaKnown RBP16.93■□□□□ 0.3
MKS1-202ENST00000393119 MTMR2Q13614 643 aa16.93■□□□□ 0.3
MKS1-202ENST00000393119 TNFAIP1Q13829 316 aa16.93■□□□□ 0.3
MKS1-202ENST00000393119 HAS1Q92839 578 aa16.93■□□□□ 0.3
MKS1-202ENST00000393119 AGBL1Q96MI9 1066 aa16.93■□□□□ 0.3
MKS1-202ENST00000393119 ZNF75DP51815 510 aa16.92■□□□□ 0.3
MKS1-202ENST00000393119 DPYDQ12882 1025 aa16.92■□□□□ 0.3
MKS1-202ENST00000393119 CALCRLQ16602 461 aa16.92■□□□□ 0.3
MKS1-202ENST00000393119 WNK4Q96J92 1243 aa16.92■□□□□ 0.3
MKS1-202ENST00000393119 WRNIP1Q96S55 665 aa16.92■□□□□ 0.3
MKS1-202ENST00000393119 ANO3Q9BYT9 981 aa16.92■□□□□ 0.3
MKS1-202ENST00000393119 SPP2Q13103 211 aa16.92■□□□□ 0.3
MKS1-202ENST00000393119 GPC2Q8N158 579 aa16.92■□□□□ 0.3
MKS1-202ENST00000393119 DDX25Q9UHL0 483 aaKnown RBP16.92■□□□□ 0.3
MKS1-202ENST00000393119 CFBP00751 764 aa16.91■□□□□ 0.3
MKS1-202ENST00000393119 UBA7P41226 1012 aa16.91■□□□□ 0.3
MKS1-202ENST00000393119 STAT6P42226 847 aa16.91■□□□□ 0.3
MKS1-202ENST00000393119 STX17P56962 302 aa16.91■□□□□ 0.3
MKS1-202ENST00000393119 MORC3Q14149 939 aa16.91■□□□□ 0.3
MKS1-202ENST00000393119 KLHL10Q6JEL2 608 aa16.91■□□□□ 0.3
MKS1-202ENST00000393119 PPP1R18Q6NYC8 613 aa16.91■□□□□ 0.3
MKS1-202ENST00000393119 PLA2G4DQ86XP0 818 aa16.91■□□□□ 0.3
MKS1-202ENST00000393119 C17orf53Q8N3J3 647 aaPredicted RBP16.91■□□□□ 0.3
MKS1-202ENST00000393119 IQUBQ8NA54 791 aa16.91■□□□□ 0.3
MKS1-202ENST00000393119 DISC1Q9NRI5 854 aa16.91■□□□□ 0.3
MKS1-202ENST00000393119 MAPK8IP1Q9UQF2 711 aa16.91■□□□□ 0.3
MKS1-202ENST00000393119 PLCG1P19174 1290 aa16.91■□□□□ 0.3
MKS1-202ENST00000393119 ARID5BQ14865 1188 aa16.91■□□□□ 0.3
MKS1-202ENST00000393119 ECM1Q16610 540 aa16.91■□□□□ 0.3
MKS1-202ENST00000393119 CABP7Q86V35 215 aa16.91■□□□□ 0.3
MKS1-202ENST00000393119 CPXCR1Q8N123 301 aa16.91■□□□□ 0.3
MKS1-202ENST00000393119 SPATA20Q8TB22 786 aa16.91■□□□□ 0.3
MKS1-202ENST00000393119 EMILIN3Q9NT22 766 aa16.91■□□□□ 0.3
MKS1-202ENST00000393119 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.91■□□□□ 0.3
MKS1-202ENST00000393119 ADM5C9JUS6 153 aa16.9■□□□□ 0.3
MKS1-202ENST00000393119 STAT3P40763 770 aa16.9■□□□□ 0.3
MKS1-202ENST00000393119 CCDC144BQ3MJ40 725 aa16.9■□□□□ 0.3
MKS1-202ENST00000393119 NT5DC1Q5TFE4 455 aa16.9■□□□□ 0.3
MKS1-202ENST00000393119 C9orf131Q5VYM1 1079 aa16.9■□□□□ 0.3
MKS1-202ENST00000393119 RRAGBQ5VZM2 374 aa16.9■□□□□ 0.3
MKS1-202ENST00000393119 FANCLQ9NW38 375 aa16.9■□□□□ 0.3
MKS1-202ENST00000393119 CCDC39Q9UFE4 941 aa16.9■□□□□ 0.3
MKS1-202ENST00000393119 ARFGEF1Q9Y6D6 1849 aa16.9■□□□□ 0.3
MKS1-202ENST00000393119 NAT10Q9H0A0 1025 aaKnown RBP16.89■□□□□ 0.3
MKS1-202ENST00000393119 FAM86B1E9PN63 330 aa16.89■□□□□ 0.29
MKS1-202ENST00000393119 FAM86B2P0C5J1 330 aa16.89■□□□□ 0.29
MKS1-202ENST00000393119 KCNK18Q7Z418 384 aa16.89■□□□□ 0.29
MKS1-202ENST00000393119 DRC7Q8IY82 874 aa16.89■□□□□ 0.29
MKS1-202ENST00000393119 CNKSR2Q8WXI2 1034 aa16.89■□□□□ 0.29
MKS1-202ENST00000393119 HOMER2Q9NSB8 354 aa16.89■□□□□ 0.29
MKS1-202ENST00000393119 PEX10O60683 326 aa16.88■□□□□ 0.29
MKS1-202ENST00000393119 CTNND1O60716 968 aaKnown RBP16.88■□□□□ 0.29
MKS1-202ENST00000393119 PTGS1P23219 599 aa16.88■□□□□ 0.29
MKS1-202ENST00000393119 PRPHP41219 470 aa16.88■□□□□ 0.29
MKS1-202ENST00000393119 PRR16Q569H4 304 aa16.88■□□□□ 0.29
MKS1-202ENST00000393119 FAM177A1Q8N128 213 aaPredicted RBP16.88■□□□□ 0.29
MKS1-202ENST00000393119 IGSF22Q8N9C0 903 aa16.88■□□□□ 0.29
MKS1-202ENST00000393119 TANGO6Q9C0B7 1094 aa16.88■□□□□ 0.29
MKS1-202ENST00000393119 RANBP17Q9H2T7 1088 aaKnown RBP16.88■□□□□ 0.29
MKS1-202ENST00000393119 KCNF1Q9H3M0 494 aa16.88■□□□□ 0.29
MKS1-202ENST00000393119 ZHX2Q9Y6X8 837 aa16.88■□□□□ 0.29
MKS1-202ENST00000393119 PCNTO95613 3336 aa16.88■□□□□ 0.29
MKS1-202ENST00000393119 SSC5DA1L4H1 1573 aa16.88■□□□□ 0.29
MKS1-202ENST00000393119 ARHGAP4P98171 946 aa16.88■□□□□ 0.29
MKS1-202ENST00000393119 LDHDQ86WU2 507 aa16.88■□□□□ 0.29
MKS1-202ENST00000393119 HPS3Q969F9 1004 aa16.88■□□□□ 0.29
MKS1-202ENST00000393119 PNMA5Q96PV4 448 aa16.88■□□□□ 0.29
MKS1-202ENST00000393119 PURBQ96QR8 312 aaKnown RBP16.88■□□□□ 0.29
MKS1-202ENST00000393119 RAVER2Q9HCJ3 691 aaKnown RBP16.88■□□□□ 0.29
MKS1-202ENST00000393119 LRWD1Q9UFC0 647 aa16.88■□□□□ 0.29
MKS1-202ENST00000393119 GDAQ9Y2T3 454 aa16.88■□□□□ 0.29
MKS1-202ENST00000393119 ZNF536O15090 1300 aa16.88■□□□□ 0.29
MKS1-202ENST00000393119 VCAM1P19320 739 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms