RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 SNHG28P0DPA3 235 aa13.77□□□□□ -0.21
RFC5-201ENST00000392542 ADCY7P51828 1080 aa13.77□□□□□ -0.21
RFC5-201ENST00000392542 FAM193AP78312 1265 aa13.77□□□□□ -0.21
RFC5-201ENST00000392542 GTF2IP78347 998 aa13.77□□□□□ -0.21
RFC5-201ENST00000392542 CALCRLQ16602 461 aa13.77□□□□□ -0.21
RFC5-201ENST00000392542 TSR1Q2NL82 804 aaKnown RBP13.77□□□□□ -0.21
RFC5-201ENST00000392542 ANKRD40Q6AI12 368 aa13.77□□□□□ -0.21
RFC5-201ENST00000392542 CNNM4Q6P4Q7 775 aa13.77□□□□□ -0.21
RFC5-201ENST00000392542 NUP58Q9BVL2 599 aa13.77□□□□□ -0.21
RFC5-201ENST00000392542 TTYH3Q9C0H2 523 aa13.77□□□□□ -0.21
RFC5-201ENST00000392542 ZSWIM4Q9H7M6 989 aa13.77□□□□□ -0.21
RFC5-201ENST00000392542 ARFGAP3Q9NP61 516 aa13.77□□□□□ -0.21
RFC5-201ENST00000392542 PUF60Q9UHX1 559 aaKnown RBP13.77□□□□□ -0.21
RFC5-201ENST00000392542 QSER1Q2KHR3 1735 aa13.77□□□□□ -0.21
RFC5-201ENST00000392542 FCER1AP12319 257 aa13.76□□□□□ -0.21
RFC5-201ENST00000392542 AKR1B1P15121 316 aa13.76□□□□□ -0.21
RFC5-201ENST00000392542 TXKP42681 527 aa13.76□□□□□ -0.21
RFC5-201ENST00000392542 FXR2P51116 673 aaKnown RBP eCLIP13.76□□□□□ -0.21
RFC5-201ENST00000392542 TUBB4BP68371 445 aa13.76□□□□□ -0.21
RFC5-201ENST00000392542 GRB10Q13322 594 aa13.76□□□□□ -0.21
RFC5-201ENST00000392542 PICALMQ13492 652 aa13.76□□□□□ -0.21
RFC5-201ENST00000392542 LRRC47Q8N1G4 583 aaKnown RBP13.76□□□□□ -0.21
RFC5-201ENST00000392542 COA7Q96BR5 231 aa13.76□□□□□ -0.21
RFC5-201ENST00000392542 STK17AQ9UEE5 414 aa13.76□□□□□ -0.21
RFC5-201ENST00000392542 POTEB2H3BUK9 544 aa13.76□□□□□ -0.21
RFC5-201ENST00000392542 DDR1Q08345 913 aa13.76□□□□□ -0.21
RFC5-201ENST00000392542 BRD3Q15059 726 aa13.76□□□□□ -0.21
RFC5-201ENST00000392542 MEA1Q16626 185 aa13.76□□□□□ -0.21
RFC5-201ENST00000392542 WHAMMP3Q1A5X7 153 aa13.76□□□□□ -0.21
RFC5-201ENST00000392542 WDR59Q6PJI9 974 aa13.76□□□□□ -0.21
RFC5-201ENST00000392542 SV2BQ7L1I2 683 aa13.76□□□□□ -0.21
RFC5-201ENST00000392542 TMC4Q7Z404 712 aa13.76□□□□□ -0.21
RFC5-201ENST00000392542 RETREG2Q8NC44 543 aa13.76□□□□□ -0.21
RFC5-201ENST00000392542 KIAA0895Q8NCT3 520 aa13.76□□□□□ -0.21
RFC5-201ENST00000392542 HAUS4Q9H6D7 363 aa13.76□□□□□ -0.21
RFC5-201ENST00000392542 LRWD1Q9UFC0 647 aa13.76□□□□□ -0.21
RFC5-201ENST00000392542 SUGT1Q9Y2Z0 365 aa13.76□□□□□ -0.21
RFC5-201ENST00000392542 C10orf71Q711Q0 1435 aa13.76□□□□□ -0.21
RFC5-201ENST00000392542 KLRG2A4D1S0 409 aaPredicted RBP13.75□□□□□ -0.21
RFC5-201ENST00000392542 CCDC151A5D8V7 595 aa13.75□□□□□ -0.21
RFC5-201ENST00000392542 SASH3O75995 380 aa13.75□□□□□ -0.21
RFC5-201ENST00000392542 MTIF2P46199 727 aaKnown RBP13.75□□□□□ -0.21
RFC5-201ENST00000392542 TBC1D8BQ0IIM8 1120 aa13.75□□□□□ -0.21
RFC5-201ENST00000392542 TMEM266Q2M3C6 531 aa13.75□□□□□ -0.21
RFC5-201ENST00000392542 PPP1R18Q6NYC8 613 aa13.75□□□□□ -0.21
RFC5-201ENST00000392542 DPP8Q6V1X1 898 aaPredicted RBP13.75□□□□□ -0.21
RFC5-201ENST00000392542 PNMA5Q96PV4 448 aa13.75□□□□□ -0.21
RFC5-201ENST00000392542 BLOC1S4Q9NUP1 217 aa13.75□□□□□ -0.21
RFC5-201ENST00000392542 PPEF1O14829 653 aaPredicted RBP13.75□□□□□ -0.21
RFC5-201ENST00000392542 SLC37A4O43826 429 aa13.75□□□□□ -0.21
RFC5-201ENST00000392542 EDIL3O43854 480 aa13.75□□□□□ -0.21
RFC5-201ENST00000392542 HERVK_113P62684 666 aa13.75□□□□□ -0.21
RFC5-201ENST00000392542 SP8Q8IXZ3 490 aa13.75□□□□□ -0.21
RFC5-201ENST00000392542 MSANTD4Q8NCY6 345 aa13.75□□□□□ -0.21
RFC5-201ENST00000392542 UBXN6Q9BZV1 441 aa13.75□□□□□ -0.21
RFC5-201ENST00000392542 COA1Q9GZY4 146 aa13.75□□□□□ -0.21
RFC5-201ENST00000392542 ANKZF1Q9H8Y5 726 aa13.75□□□□□ -0.21
RFC5-201ENST00000392542 RASSF10A6NK89 507 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 POLRMTO00411 1230 aaKnown RBP13.74□□□□□ -0.21
RFC5-201ENST00000392542 TDP2O95551 362 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 TRIM21P19474 475 aaKnown RBP13.74□□□□□ -0.21
RFC5-201ENST00000392542 AMPD2Q01433 879 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 MIIPQ5JXC2 388 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 ZNF662Q6ZS27 426 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 UNC13DQ70J99 1090 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 ZSCAN29Q8IWY8 852 aaPredicted RBP13.74□□□□□ -0.21
RFC5-201ENST00000392542 LARP4BQ92615 738 aaKnown RBP13.74□□□□□ -0.21
RFC5-201ENST00000392542 CDK5RAP3Q96JB5 506 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 NOC4LQ9BVI4 516 aaKnown RBP13.74□□□□□ -0.21
RFC5-201ENST00000392542 RAB34Q9BZG1 259 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 SEMA6BQ9H3T3 888 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 GPCPD1Q9NPB8 672 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 DDX4Q9NQI0 724 aaKnown RBP13.74□□□□□ -0.21
RFC5-201ENST00000392542 SWAP70Q9UH65 585 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 MYO3BQ8WXR4 1341 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 PVALEFA0A1B0GWK0 134 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 MYMKA6NI61 221 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 RIMBP2O15034 1052 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 ONECUT3O60422 494 aaPredicted RBP13.74□□□□□ -0.21
RFC5-201ENST00000392542 TTLL1O95922 423 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 CYLC1P35663 651 aaPredicted RBP13.74□□□□□ -0.21
RFC5-201ENST00000392542 EIF6P56537 245 aaKnown RBP13.74□□□□□ -0.21
RFC5-201ENST00000392542 KRT83P78385 493 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 ZBED6P86452 979 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 ZNF543Q08ER8 600 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 PDIA5Q14554 519 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 MCM6Q14566 821 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 FIGNQ5HY92 759 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 CENPPQ6IPU0 288 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 ERGIC2Q96RQ1 377 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 SLC39A2Q9NP94 309 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 ZNHIT6Q9NWK9 470 aaKnown RBP13.74□□□□□ -0.21
RFC5-201ENST00000392542 RAB21Q9UL25 225 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 MYO6Q9UM54 1294 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 GUCA1BQ9UMX6 200 aa13.74□□□□□ -0.21
RFC5-201ENST00000392542 PNMA6FA0A0J9YX94 578 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 CTAGE15A4D2H0 777 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 PSMD14O00487 310 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 CTAGE8P0CG41 777 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 KLK7P49862 253 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms