RNA–Protein interactions for RNA: ENST00000391975.5

HDLBP-203, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDLBP, Length 6,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-203ENST00000391975 LSM14BQ9BX40 385 aaKnown RBP12.69□□□□□ -0.38
HDLBP-203ENST00000391975 MRPL44Q9H9J2 332 aaKnown RBP12.69□□□□□ -0.38
HDLBP-203ENST00000391975 HDAC6Q9UBN7 1215 aa12.69□□□□□ -0.38
HDLBP-203ENST00000391975 PCDH11XQ9BZA7 1347 aa12.69□□□□□ -0.38
HDLBP-203ENST00000391975 PCDH11YQ9BZA8 1340 aa12.69□□□□□ -0.38
HDLBP-203ENST00000391975 ZSWIM5Q9P217 1185 aa12.69□□□□□ -0.38
HDLBP-203ENST00000391975 STK38LQ9Y2H1 464 aa12.69□□□□□ -0.38
HDLBP-203ENST00000391975 DNAJC8O75937 253 aaPredicted RBP12.69□□□□□ -0.38
HDLBP-203ENST00000391975 TBC1D8O95759 1140 aa12.69□□□□□ -0.38
HDLBP-203ENST00000391975 SCG2P13521 617 aa12.69□□□□□ -0.38
HDLBP-203ENST00000391975 PHKG2P15735 406 aa12.69□□□□□ -0.38
HDLBP-203ENST00000391975 VPS41P49754 854 aa12.69□□□□□ -0.38
HDLBP-203ENST00000391975 KRT25Q7Z3Z0 450 aa12.69□□□□□ -0.38
HDLBP-203ENST00000391975 ENGASEQ8NFI3 743 aa12.69□□□□□ -0.38
HDLBP-203ENST00000391975 MGARPQ8TDB4 240 aa12.69□□□□□ -0.38
HDLBP-203ENST00000391975 RNF26Q9BY78 433 aaPredicted RBP12.69□□□□□ -0.38
HDLBP-203ENST00000391975 AFG3L2Q9Y4W6 797 aa12.69□□□□□ -0.38
HDLBP-203ENST00000391975 PRR29P0C7W0 189 aa12.68□□□□□ -0.38
HDLBP-203ENST00000391975 TNFAIP3P21580 790 aa12.68□□□□□ -0.38
HDLBP-203ENST00000391975 SLC8A1P32418 973 aa12.68□□□□□ -0.38
HDLBP-203ENST00000391975 GSTO1P78417 241 aa12.68□□□□□ -0.38
HDLBP-203ENST00000391975 GPKOWQ92917 476 aaPredicted RBP eCLIP12.68□□□□□ -0.38
HDLBP-203ENST00000391975 CDCA7Q9BWT1 371 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-203ENST00000391975 ABHD10Q9NUJ1 306 aa12.68□□□□□ -0.38
HDLBP-203ENST00000391975 RWDD2AQ9UIY3 292 aa12.68□□□□□ -0.38
HDLBP-203ENST00000391975 ARHGAP31Q2M1Z3 1444 aa12.68□□□□□ -0.38
HDLBP-203ENST00000391975 MYO5CQ9NQX4 1742 aa12.68□□□□□ -0.38
HDLBP-203ENST00000391975 LAMC1P11047 1609 aa12.68□□□□□ -0.38
HDLBP-203ENST00000391975 SPOPO43791 374 aa12.68□□□□□ -0.38
HDLBP-203ENST00000391975 PEX19P40855 299 aa12.68□□□□□ -0.38
HDLBP-203ENST00000391975 ZBED6P86452 979 aa12.68□□□□□ -0.38
HDLBP-203ENST00000391975 METTL16Q86W50 562 aaKnown RBP12.68□□□□□ -0.38
HDLBP-203ENST00000391975 Q9H521 79 aa12.68□□□□□ -0.38
HDLBP-203ENST00000391975 NHEJ1Q9H9Q4 299 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-203ENST00000391975 MOCS3O95396 460 aa12.68□□□□□ -0.38
HDLBP-203ENST00000391975 NR1D1P20393 614 aa12.68□□□□□ -0.38
HDLBP-203ENST00000391975 MAP3K21Q5TCX8 1036 aa12.68□□□□□ -0.38
HDLBP-203ENST00000391975 CCDC117Q8IWD4 279 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-203ENST00000391975 PSPC1Q8WXF1 523 aaKnown RBP12.68□□□□□ -0.38
HDLBP-203ENST00000391975 AATFQ9NY61 560 aaKnown RBP eCLIP12.68□□□□□ -0.38
HDLBP-203ENST00000391975 ABCC3O15438 1527 aa12.68□□□□□ -0.38
HDLBP-203ENST00000391975 POLR2FP61218 127 aaKnown RBP12.68□□□□□ -0.38
HDLBP-203ENST00000391975 MUM1L1Q5H9M0 696 aa12.68□□□□□ -0.38
HDLBP-203ENST00000391975 ZNF658Q5TYW1 1059 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-203ENST00000391975 KIFC2Q96AC6 838 aa12.68□□□□□ -0.38
HDLBP-203ENST00000391975 FAM212AQ96EL1 285 aa12.68□□□□□ -0.38
HDLBP-203ENST00000391975 MRPL46Q9H2W6 279 aaKnown RBP12.68□□□□□ -0.38
HDLBP-203ENST00000391975 GDAQ9Y2T3 454 aa12.68□□□□□ -0.38
HDLBP-203ENST00000391975 TFAP4Q01664 338 aa12.67□□□□□ -0.38
HDLBP-203ENST00000391975 DENND2CQ68D51 928 aa12.67□□□□□ -0.38
HDLBP-203ENST00000391975 SUGCTQ9HAC7 445 aa12.67□□□□□ -0.38
HDLBP-203ENST00000391975 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.67□□□□□ -0.38
HDLBP-203ENST00000391975 USP42Q9H9J4 1324 aaKnown RBP12.67□□□□□ -0.38
HDLBP-203ENST00000391975 TMEM2Q9UHN6 1383 aa12.67□□□□□ -0.38
HDLBP-203ENST00000391975 LONP1P36776 959 aaKnown RBP12.67□□□□□ -0.38
HDLBP-203ENST00000391975 PDCD2Q16342 344 aaPredicted RBP12.67□□□□□ -0.38
HDLBP-203ENST00000391975 TCP11Q8WWU5 503 aa12.67□□□□□ -0.38
HDLBP-203ENST00000391975 CTTNBP2NLQ9P2B4 639 aa12.67□□□□□ -0.38
HDLBP-203ENST00000391975 EMBQ6PCB8 327 aa12.67□□□□□ -0.38
HDLBP-203ENST00000391975 RBM43Q6ZSC3 357 aaKnown RBP12.67□□□□□ -0.38
HDLBP-203ENST00000391975 ANKRD42Q8N9B4 389 aa12.67□□□□□ -0.38
HDLBP-203ENST00000391975 RETREG2Q8NC44 543 aa12.67□□□□□ -0.38
HDLBP-203ENST00000391975 DENND2AQ9ULE3 1009 aa12.67□□□□□ -0.38
HDLBP-203ENST00000391975 ROBO2Q9HCK4 1378 aa12.67□□□□□ -0.38
HDLBP-203ENST00000391975 USP14P54578 494 aa12.67□□□□□ -0.38
HDLBP-203ENST00000391975 MX2P20592 715 aa12.67□□□□□ -0.38
HDLBP-203ENST00000391975 ADD2P35612 726 aa12.67□□□□□ -0.38
HDLBP-203ENST00000391975 TECP42680 631 aa12.67□□□□□ -0.38
HDLBP-203ENST00000391975 LIFRP42702 1097 aa12.67□□□□□ -0.38
HDLBP-203ENST00000391975 TCP11X2Q5H9J9 407 aa12.67□□□□□ -0.38
HDLBP-203ENST00000391975 EIF2AQ9BY44 585 aaKnown RBP12.67□□□□□ -0.38
HDLBP-203ENST00000391975 PRKAB2O43741 272 aa12.66□□□□□ -0.38
HDLBP-203ENST00000391975 CIAO1O76071 339 aa12.66□□□□□ -0.38
HDLBP-203ENST00000391975 EPB41P11171 864 aaKnown RBP12.66□□□□□ -0.38
HDLBP-203ENST00000391975 EIF4A3P38919 411 aaKnown RBP12.66□□□□□ -0.38
HDLBP-203ENST00000391975 ALS2CLQ60I27 953 aa12.66□□□□□ -0.38
HDLBP-203ENST00000391975 PHLDB3Q6NSJ2 640 aa12.66□□□□□ -0.38
HDLBP-203ENST00000391975 ADAT2Q7Z6V5 191 aaKnown RBP12.66□□□□□ -0.38
HDLBP-203ENST00000391975 COG1Q8WTW3 980 aa12.66□□□□□ -0.38
HDLBP-203ENST00000391975 NFU1Q9UMS0 254 aa12.66□□□□□ -0.38
HDLBP-203ENST00000391975 EXOSC10Q01780 885 aaKnown RBP12.66□□□□□ -0.38
HDLBP-203ENST00000391975 NAA35Q5VZE5 725 aa12.66□□□□□ -0.38
HDLBP-203ENST00000391975 CROCCP2Q86T23 111 aa12.66□□□□□ -0.38
HDLBP-203ENST00000391975 MB21D2Q8IYB1 491 aaPredicted RBP12.66□□□□□ -0.38
HDLBP-203ENST00000391975 GABPB2Q8TAK5 448 aaPredicted RBP12.66□□□□□ -0.38
HDLBP-203ENST00000391975 RASGRP4Q8TDF6 673 aa12.66□□□□□ -0.38
HDLBP-203ENST00000391975 PLCB1Q9NQ66 1216 aa12.66□□□□□ -0.38
HDLBP-203ENST00000391975 FTCDO95954 541 aa12.66□□□□□ -0.38
HDLBP-203ENST00000391975 IFNAR2P48551 515 aa12.66□□□□□ -0.38
HDLBP-203ENST00000391975 DBN1Q16643 649 aa12.66□□□□□ -0.38
HDLBP-203ENST00000391975 TC2NQ8N9U0 490 aa12.66□□□□□ -0.38
HDLBP-203ENST00000391975 U2AF1L4Q8WU68 220 aaKnown RBP12.66□□□□□ -0.38
HDLBP-203ENST00000391975 RAB17Q9H0T7 212 aa12.66□□□□□ -0.38
HDLBP-203ENST00000391975 ASIC3Q9UHC3 531 aa12.66□□□□□ -0.38
HDLBP-203ENST00000391975 KRT3P12035 628 aa12.66□□□□□ -0.38
HDLBP-203ENST00000391975 RASSF2P50749 326 aa12.66□□□□□ -0.38
HDLBP-203ENST00000391975 P2RX5Q93086 422 aa12.66□□□□□ -0.38
HDLBP-203ENST00000391975 PPME1Q9Y570 386 aa12.66□□□□□ -0.38
HDLBP-203ENST00000391975 RFX1P22670 979 aa12.66□□□□□ -0.38
HDLBP-203ENST00000391975 PPP2R5CQ13362 524 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms