RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 REXO1Q8N1G1 1221 aaKnown RBP19.53■□□□□ 0.72
ERCC2-202ENST00000391942 BICD2Q8TD16 824 aa19.53■□□□□ 0.72
ERCC2-202ENST00000391942 PCDHA6Q9UN73 950 aa19.53■□□□□ 0.72
ERCC2-202ENST00000391942 PCDHA8Q9Y5H6 950 aa19.53■□□□□ 0.72
ERCC2-202ENST00000391942 COPB2P35606 906 aa19.52■□□□□ 0.72
ERCC2-202ENST00000391942 BAATQ14032 418 aaPredicted RBP19.52■□□□□ 0.72
ERCC2-202ENST00000391942 RNF207Q6ZRF8 634 aa19.52■□□□□ 0.72
ERCC2-202ENST00000391942 FCHSD1Q86WN1 690 aa19.52■□□□□ 0.72
ERCC2-202ENST00000391942 SHCBP1Q8NEM2 672 aa19.52■□□□□ 0.72
ERCC2-202ENST00000391942 MROH8Q9H579 483 aa19.52■□□□□ 0.72
ERCC2-202ENST00000391942 A1CFQ9NQ94 594 aaKnown RBP19.52■□□□□ 0.72
ERCC2-202ENST00000391942 CHMP5Q9NZZ3 219 aa19.52■□□□□ 0.72
ERCC2-202ENST00000391942 FBXO40Q9UH90 709 aa19.52■□□□□ 0.72
ERCC2-202ENST00000391942 FAM205CA6NFA0 338 aa19.51■□□□□ 0.71
ERCC2-202ENST00000391942 BRD1O95696 1058 aa19.51■□□□□ 0.71
ERCC2-202ENST00000391942 RPS6P62753 249 aaKnown RBP19.51■□□□□ 0.71
ERCC2-202ENST00000391942 NUCB2P80303 420 aa19.51■□□□□ 0.71
ERCC2-202ENST00000391942 ANKRD35Q8N283 1001 aa19.51■□□□□ 0.71
ERCC2-202ENST00000391942 DNAJC5GQ8N7S2 189 aa19.51■□□□□ 0.71
ERCC2-202ENST00000391942 GLT8D2Q9H1C3 349 aa19.51■□□□□ 0.71
ERCC2-202ENST00000391942 CIZ1Q9ULV3 898 aaPredicted RBP19.51■□□□□ 0.71
ERCC2-202ENST00000391942 M0R2N6 131 aa19.5■□□□□ 0.71
ERCC2-202ENST00000391942 F13A1P00488 732 aa19.5■□□□□ 0.71
ERCC2-202ENST00000391942 CLK2P49760 499 aaKnown RBP19.5■□□□□ 0.71
ERCC2-202ENST00000391942 HSD17B4P51659 736 aa19.5■□□□□ 0.71
ERCC2-202ENST00000391942 RESTQ13127 1097 aa19.5■□□□□ 0.71
ERCC2-202ENST00000391942 FOXD4L6Q3SYB3 417 aaPredicted RBP19.5■□□□□ 0.71
ERCC2-202ENST00000391942 EARS2Q5JPH6 523 aaKnown RBP19.5■□□□□ 0.71
ERCC2-202ENST00000391942 FOXD4L3Q6VB84 417 aaPredicted RBP19.5■□□□□ 0.71
ERCC2-202ENST00000391942 PIK3AP1Q6ZUJ8 805 aa19.5■□□□□ 0.71
ERCC2-202ENST00000391942 RGS22Q8NE09 1264 aa19.5■□□□□ 0.71
ERCC2-202ENST00000391942 TNFRSF25Q93038 417 aa19.5■□□□□ 0.71
ERCC2-202ENST00000391942 PURBQ96QR8 312 aaKnown RBP19.5■□□□□ 0.71
ERCC2-202ENST00000391942 MMP19Q99542 508 aa19.5■□□□□ 0.71
ERCC2-202ENST00000391942 FOXP1Q9H334 677 aaPredicted RBP19.5■□□□□ 0.71
ERCC2-202ENST00000391942 CYP39A1Q9NYL5 469 aa19.5■□□□□ 0.71
ERCC2-202ENST00000391942 COL20A1Q9P218 1284 aa19.5■□□□□ 0.71
ERCC2-202ENST00000391942 PLXNB2O15031 1838 aa19.49■□□□□ 0.71
ERCC2-202ENST00000391942 PIK3CDO00329 1044 aa19.49■□□□□ 0.71
ERCC2-202ENST00000391942 PDIA4P13667 645 aaKnown RBP19.49■□□□□ 0.71
ERCC2-202ENST00000391942 NOSTRINQ8IVI9 506 aa19.49■□□□□ 0.71
ERCC2-202ENST00000391942 SYTL5Q8TDW5 730 aaPredicted RBP19.49■□□□□ 0.71
ERCC2-202ENST00000391942 TSKSQ9UJT2 592 aa19.49■□□□□ 0.71
ERCC2-202ENST00000391942 CCDC194A0A1B0GVG4 234 aa19.48■□□□□ 0.71
ERCC2-202ENST00000391942 PGK2P07205 417 aa19.48■□□□□ 0.71
ERCC2-202ENST00000391942 FCER1AP12319 257 aa19.48■□□□□ 0.71
ERCC2-202ENST00000391942 U2AF2P26368 475 aaKnown RBP eCLIP19.48■□□□□ 0.71
ERCC2-202ENST00000391942 MAPK4P31152 587 aa19.48■□□□□ 0.71
ERCC2-202ENST00000391942 MAP2K1Q02750 393 aaPredicted RBP19.48■□□□□ 0.71
ERCC2-202ENST00000391942 KCTD2Q14681 263 aa19.48■□□□□ 0.71
ERCC2-202ENST00000391942 FAM173BQ6P4H8 233 aa19.48■□□□□ 0.71
ERCC2-202ENST00000391942 GPR142Q7Z601 462 aa19.48■□□□□ 0.71
ERCC2-202ENST00000391942 IVNS1ABPQ9Y6Y0 642 aa19.48■□□□□ 0.71
ERCC2-202ENST00000391942 ZSWIM8A7E2V4 1837 aa19.48■□□□□ 0.71
ERCC2-202ENST00000391942 SPDYE3A6NKU9 549 aa19.48■□□□□ 0.71
ERCC2-202ENST00000391942 KRT25Q7Z3Z0 450 aa19.48■□□□□ 0.71
ERCC2-202ENST00000391942 PLEKHH3Q7Z736 793 aa19.48■□□□□ 0.71
ERCC2-202ENST00000391942 TAAR1Q96RJ0 339 aa19.48■□□□□ 0.71
ERCC2-202ENST00000391942 BEGAINQ9BUH8 593 aa19.48■□□□□ 0.71
ERCC2-202ENST00000391942 CFHR5Q9BXR6 569 aa19.48■□□□□ 0.71
ERCC2-202ENST00000391942 ANO3Q9BYT9 981 aa19.48■□□□□ 0.71
ERCC2-202ENST00000391942 PFASO15067 1338 aa19.47■□□□□ 0.71
ERCC2-202ENST00000391942 UBXN2AP68543 259 aa19.47■□□□□ 0.71
ERCC2-202ENST00000391942 CNTN2Q02246 1040 aa19.47■□□□□ 0.71
ERCC2-202ENST00000391942 GHRHRQ02643 423 aa19.47■□□□□ 0.71
ERCC2-202ENST00000391942 INF2Q27J81 1249 aa19.47■□□□□ 0.71
ERCC2-202ENST00000391942 ARHGAP39Q9C0H5 1083 aa19.47■□□□□ 0.71
ERCC2-202ENST00000391942 LCTP09848 1927 aa19.47■□□□□ 0.71
ERCC2-202ENST00000391942 ZNFX1Q9P2E3 1918 aaKnown RBP19.46■□□□□ 0.71
ERCC2-202ENST00000391942 POTEB2H3BUK9 544 aa19.46■□□□□ 0.71
ERCC2-202ENST00000391942 ATP2B1P20020 1258 aa19.46■□□□□ 0.71
ERCC2-202ENST00000391942 CTGFP29279 349 aa19.46■□□□□ 0.71
ERCC2-202ENST00000391942 SP3Q02447 781 aa19.46■□□□□ 0.71
ERCC2-202ENST00000391942 AP3B2Q13367 1082 aa19.46■□□□□ 0.71
ERCC2-202ENST00000391942 NONOQ15233 471 aaKnown RBP eCLIP19.46■□□□□ 0.71
ERCC2-202ENST00000391942 BRAPQ7Z569 592 aa19.46■□□□□ 0.71
ERCC2-202ENST00000391942 SAMD3Q8N6K7 520 aa19.46■□□□□ 0.71
ERCC2-202ENST00000391942 CHAMP1Q96JM3 812 aa19.46■□□□□ 0.71
ERCC2-202ENST00000391942 ZSCAN16Q9H4T2 348 aaPredicted RBP19.46■□□□□ 0.71
ERCC2-202ENST00000391942 SAGE1Q9NXZ1 904 aa19.46■□□□□ 0.71
ERCC2-202ENST00000391942 MAP3K20Q9NYL2 800 aaKnown RBP19.46■□□□□ 0.71
ERCC2-202ENST00000391942 MGAMO43451 1857 aa19.45■□□□□ 0.7
ERCC2-202ENST00000391942 GPR25O00155 361 aa19.45■□□□□ 0.7
ERCC2-202ENST00000391942 TNPO2O14787 897 aaKnown RBP19.45■□□□□ 0.7
ERCC2-202ENST00000391942 FOSP01100 380 aaPredicted RBP19.45■□□□□ 0.7
ERCC2-202ENST00000391942 PTPREP23469 700 aa19.45■□□□□ 0.7
ERCC2-202ENST00000391942 ADORA2AP29274 412 aa19.45■□□□□ 0.7
ERCC2-202ENST00000391942 LACTBP83111 547 aaPredicted RBP19.45■□□□□ 0.7
ERCC2-202ENST00000391942 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.45■□□□□ 0.7
ERCC2-202ENST00000391942 TBCKQ8TEA7 893 aa19.45■□□□□ 0.7
ERCC2-202ENST00000391942 STRNO43815 780 aa19.44■□□□□ 0.7
ERCC2-202ENST00000391942 EIF2AK2P19525 551 aaKnown RBP19.44■□□□□ 0.7
ERCC2-202ENST00000391942 PSMC4P43686 418 aa19.44■□□□□ 0.7
ERCC2-202ENST00000391942 ARHGEF16Q5VV41 709 aa19.44■□□□□ 0.7
ERCC2-202ENST00000391942 RMDN3Q96TC7 470 aa19.44■□□□□ 0.7
ERCC2-202ENST00000391942 DDX49Q9Y6V7 483 aaKnown RBP19.44■□□□□ 0.7
ERCC2-202ENST00000391942 MYH7BA7E2Y1 1941 aa19.44■□□□□ 0.7
ERCC2-202ENST00000391942 CEP350Q5VT06 3117 aa19.43■□□□□ 0.7
ERCC2-202ENST00000391942 SOWAHBA6NEL2 793 aa19.43■□□□□ 0.7
ERCC2-202ENST00000391942 COBLO75128 1261 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms