RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 SPC25Q9HBM1 224 aa14.71□□□□□ -0.05
GGPS1-203ENST00000391855 MAP3K20Q9NYL2 800 aaKnown RBP14.71□□□□□ -0.05
GGPS1-203ENST00000391855 SLC12A7Q9Y666 1083 aa14.71□□□□□ -0.05
GGPS1-203ENST00000391855 LCTP09848 1927 aa14.71□□□□□ -0.05
GGPS1-203ENST00000391855 BRCA2P51587 3418 aa14.7□□□□□ -0.06
GGPS1-203ENST00000391855 GHRHRQ02643 423 aa14.7□□□□□ -0.06
GGPS1-203ENST00000391855 LRRC41Q15345 812 aa14.7□□□□□ -0.06
GGPS1-203ENST00000391855 RASEFQ8IZ41 740 aa14.7□□□□□ -0.06
GGPS1-203ENST00000391855 TNRC18O15417 2968 aaPredicted RBP14.7□□□□□ -0.06
GGPS1-203ENST00000391855 ASTN1O14525 1302 aa14.7□□□□□ -0.06
GGPS1-203ENST00000391855 MCM3APO60318 1980 aa14.69□□□□□ -0.06
GGPS1-203ENST00000391855 SMCHD1A6NHR9 2005 aa14.69□□□□□ -0.06
GGPS1-203ENST00000391855 PNMA6FA0A0J9YX94 578 aa14.69□□□□□ -0.06
GGPS1-203ENST00000391855 ADAMTS4O75173 837 aa14.69□□□□□ -0.06
GGPS1-203ENST00000391855 PSMA5P28066 241 aa14.69□□□□□ -0.06
GGPS1-203ENST00000391855 RCAN1P53805 252 aa14.69□□□□□ -0.06
GGPS1-203ENST00000391855 EXOSC10Q01780 885 aaKnown RBP14.69□□□□□ -0.06
GGPS1-203ENST00000391855 CCDC144BQ3MJ40 725 aa14.69□□□□□ -0.06
GGPS1-203ENST00000391855 GJC2Q5T442 439 aaPredicted RBP14.69□□□□□ -0.06
GGPS1-203ENST00000391855 HOMER1Q86YM7 354 aa14.69□□□□□ -0.06
GGPS1-203ENST00000391855 PIGSQ96S52 555 aa14.69□□□□□ -0.06
GGPS1-203ENST00000391855 TSEN34Q9BSV6 310 aaKnown RBP14.69□□□□□ -0.06
GGPS1-203ENST00000391855 GPHNQ9NQX3 736 aaPredicted RBP14.69□□□□□ -0.06
GGPS1-203ENST00000391855 PCDHA1Q9Y5I3 950 aa14.69□□□□□ -0.06
GGPS1-203ENST00000391855 CYTH3O43739 400 aa14.68□□□□□ -0.06
GGPS1-203ENST00000391855 EDNRBP24530 442 aa14.68□□□□□ -0.06
GGPS1-203ENST00000391855 CST5P28325 142 aaPredicted RBP14.68□□□□□ -0.06
GGPS1-203ENST00000391855 NKX3-2P78367 333 aa14.68□□□□□ -0.06
GGPS1-203ENST00000391855 PDE4DQ08499 809 aa14.68□□□□□ -0.06
GGPS1-203ENST00000391855 ADCK5Q3MIX3 580 aa14.68□□□□□ -0.06
GGPS1-203ENST00000391855 IQSEC1Q6DN90 963 aa14.68□□□□□ -0.06
GGPS1-203ENST00000391855 SYTL5Q8TDW5 730 aaPredicted RBP14.68□□□□□ -0.06
GGPS1-203ENST00000391855 RRP36Q96EU6 259 aaKnown RBP14.68□□□□□ -0.06
GGPS1-203ENST00000391855 SENP6Q9GZR1 1112 aaPredicted RBP14.68□□□□□ -0.06
GGPS1-203ENST00000391855 UPF3AQ9H1J1 476 aaKnown RBP14.68□□□□□ -0.06
GGPS1-203ENST00000391855 RBM28Q9NW13 759 aaKnown RBP14.68□□□□□ -0.06
GGPS1-203ENST00000391855 SEC63Q9UGP8 760 aaKnown RBP14.68□□□□□ -0.06
GGPS1-203ENST00000391855 PHF24Q9UPV7 400 aa14.68□□□□□ -0.06
GGPS1-203ENST00000391855 SYNRGQ9UMZ2 1314 aa14.68□□□□□ -0.06
GGPS1-203ENST00000391855 MOXD2PA6NHM9 499 aa14.67□□□□□ -0.06
GGPS1-203ENST00000391855 GJA9P57773 515 aa14.67□□□□□ -0.06
GGPS1-203ENST00000391855 FGD1P98174 961 aa14.67□□□□□ -0.06
GGPS1-203ENST00000391855 TNFAIP2Q03169 654 aa14.67□□□□□ -0.06
GGPS1-203ENST00000391855 SLC35G1Q2M3R5 365 aa14.67□□□□□ -0.06
GGPS1-203ENST00000391855 APOA5Q6Q788 366 aa14.67□□□□□ -0.06
GGPS1-203ENST00000391855 BLOC1S2Q6QNY1 142 aa14.67□□□□□ -0.06
GGPS1-203ENST00000391855 FBXO16Q8IX29 292 aaPredicted RBP14.67□□□□□ -0.06
GGPS1-203ENST00000391855 PCSK9Q8NBP7 692 aaKnown RBP14.67□□□□□ -0.06
GGPS1-203ENST00000391855 NSUN6Q8TEA1 469 aaKnown RBP14.67□□□□□ -0.06
GGPS1-203ENST00000391855 JAKMIP1Q96N16 626 aaKnown RBP14.67□□□□□ -0.06
GGPS1-203ENST00000391855 MYL10Q9BUA6 226 aa14.67□□□□□ -0.06
GGPS1-203ENST00000391855 LRRC2Q9BYS8 371 aa14.67□□□□□ -0.06
GGPS1-203ENST00000391855 Q9Y3F1 56 aa14.67□□□□□ -0.06
GGPS1-203ENST00000391855 SNX14Q9Y5W7 946 aa14.67□□□□□ -0.06
GGPS1-203ENST00000391855 ALPK3Q96L96 1907 aa14.67□□□□□ -0.06
GGPS1-203ENST00000391855 H0YGN5 161 aa14.66□□□□□ -0.06
GGPS1-203ENST00000391855 PPP1R11O60927 126 aaPredicted RBP14.66□□□□□ -0.06
GGPS1-203ENST00000391855 PGK1P00558 417 aa14.66□□□□□ -0.06
GGPS1-203ENST00000391855 HSD17B4P51659 736 aa14.66□□□□□ -0.06
GGPS1-203ENST00000391855 COL9A3Q14050 684 aaPredicted RBP14.66□□□□□ -0.06
GGPS1-203ENST00000391855 PPP2R5BQ15173 497 aa14.66□□□□□ -0.06
GGPS1-203ENST00000391855 C1orf53Q5VUE5 145 aa14.66□□□□□ -0.06
GGPS1-203ENST00000391855 MICU3Q86XE3 530 aa14.66□□□□□ -0.06
GGPS1-203ENST00000391855 C7orf61Q8IZ16 206 aa14.66□□□□□ -0.06
GGPS1-203ENST00000391855 FANCBQ8NB91 859 aa14.66□□□□□ -0.06
GGPS1-203ENST00000391855 KLHDC9Q8NEP7 349 aa14.66□□□□□ -0.06
GGPS1-203ENST00000391855 PURBQ96QR8 312 aaKnown RBP14.66□□□□□ -0.06
GGPS1-203ENST00000391855 IWS1Q96ST2 819 aa14.66□□□□□ -0.06
GGPS1-203ENST00000391855 RBM47A0AV96 593 aaKnown RBP14.66□□□□□ -0.06
GGPS1-203ENST00000391855 NKRFO15226 690 aaKnown RBP eCLIP14.66□□□□□ -0.06
GGPS1-203ENST00000391855 ZBTB43O43298 467 aa14.66□□□□□ -0.06
GGPS1-203ENST00000391855 CFBP00751 764 aa14.66□□□□□ -0.06
GGPS1-203ENST00000391855 C6orf222P0C671 652 aaPredicted RBP14.66□□□□□ -0.06
GGPS1-203ENST00000391855 ADCYAP1R1P41586 468 aa14.66□□□□□ -0.06
GGPS1-203ENST00000391855 SNX17Q15036 470 aa14.66□□□□□ -0.06
GGPS1-203ENST00000391855 TAPT1Q6NXT6 567 aa14.66□□□□□ -0.06
GGPS1-203ENST00000391855 TMTC3Q6ZXV5 915 aa14.66□□□□□ -0.06
GGPS1-203ENST00000391855 NOL8Q76FK4 1167 aaKnown RBP14.66□□□□□ -0.06
GGPS1-203ENST00000391855 FBXL16Q8N461 479 aa14.66□□□□□ -0.06
GGPS1-203ENST00000391855 LENG1Q96BZ8 264 aaPredicted RBP14.66□□□□□ -0.06
GGPS1-203ENST00000391855 AP5M1Q9H0R1 490 aa14.66□□□□□ -0.06
GGPS1-203ENST00000391855 GNEQ9Y223 722 aaKnown RBP14.66□□□□□ -0.06
GGPS1-203ENST00000391855 GCOM1H8Y6P7 765 aaPredicted RBP14.65□□□□□ -0.06
GGPS1-203ENST00000391855 OPLAHO14841 1288 aa14.65□□□□□ -0.06
GGPS1-203ENST00000391855 PLEKHA8P1O95397 391 aa14.65□□□□□ -0.06
GGPS1-203ENST00000391855 POLR2MP0CAP2 368 aa14.65□□□□□ -0.06
GGPS1-203ENST00000391855 RXRAP19793 462 aa14.65□□□□□ -0.06
GGPS1-203ENST00000391855 RPS6KB1P23443 525 aa14.65□□□□□ -0.06
GGPS1-203ENST00000391855 RTN1Q16799 776 aa14.65□□□□□ -0.06
GGPS1-203ENST00000391855 LRRC26Q2I0M4 334 aa14.65□□□□□ -0.06
GGPS1-203ENST00000391855 DUSP28Q4G0W2 176 aa14.65□□□□□ -0.06
GGPS1-203ENST00000391855 EEPD1Q7L9B9 569 aa14.65□□□□□ -0.06
GGPS1-203ENST00000391855 TLK2Q86UE8 772 aa14.65□□□□□ -0.06
GGPS1-203ENST00000391855 TEX2Q8IWB9 1127 aa14.65□□□□□ -0.06
GGPS1-203ENST00000391855 SRBD1Q8N5C6 995 aaKnown RBP14.65□□□□□ -0.06
GGPS1-203ENST00000391855 SCFD2Q8WU76 684 aa14.65□□□□□ -0.06
GGPS1-203ENST00000391855 RMDN3Q96TC7 470 aa14.65□□□□□ -0.06
GGPS1-203ENST00000391855 KLF18A0A0U1RQI7 1052 aa14.64□□□□□ -0.07
GGPS1-203ENST00000391855 CCDC196A0A1B0GTZ2 297 aa14.64□□□□□ -0.07
GGPS1-203ENST00000391855 A0A1W2PQ45 241 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms